MGE detailed information
MGE type: IScluster/Tn MGE length: 24500 bp
Accession: NZ_CP083273 Location: 4473015..4497514 Organism: Escherichia coli strain BL21-RIPL Replicon: chromosome
Accession: NZ_CP083273 Location: 4473015..4497514 Organism: Escherichia coli strain BL21-RIPL Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9U36_RS21780 () | 4468662..4472367 | + | 3706 | Protein_4278 | RHS domain-containing protein | - |
| K9U36_RS21785 () | 4472570..4472833 | + | 264 | WP_000247944.1 | hypothetical protein | - |
| K9U36_RS21790 () | 4472748..4472933 | - | 186 | WP_120795385.1 | protein YncO | - |
| K9U36_RS21795 () | 4473015..4474102 | + | 1088 | Protein_4281 | ISAs1 family transposase ISEc26 | Transposase |
| K9U36_RS21800 () | 4474156..4474278 | + | 123 | Protein_4282 | hypothetical protein | - |
| K9U36_RS21805 () | 4474288..4474797 | - | 510 | WP_001079072.1 | cytochrome b | - |
| K9U36_RS21810 () | 4475140..4475790 | - | 651 | WP_001007806.1 | metal-binding protein ZinT | - |
| K9U36_RS21815 () | 4476047..4476433 | - | 387 | Protein_4285 | sulfoxide reductase heme-binding subunit YedZ | - |
| K9U36_RS21820 () | 4476591..4476662 | - | 72 | Protein_4286 | hypothetical protein | - |
| K9U36_RS21825 () | 4476659..4477156 | - | 498 | WP_001135280.1 | lysozyme RrrD | - |
| K9U36_RS21830 () | 4477156..4477371 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| K9U36_RS21835 () | 4477960..4478538 | + | 579 | Protein_4289 | Outer membrane porin protein OmpD | VF |
| K9U36_RS21845 () | 4478751..4479341 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| K9U36_RS21850 () | 4479658..4479891 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| K9U36_RS21855 () | 4479960..4480073 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| K9U36_RS21865 () | 4482132..4482575 | - | 444 | Protein_4293 | beta-galactosidase | - |
| K9U36_RS21870 () | 4482698..4483780 | - | 1083 | WP_000805902.1 | DNA-binding transcriptional repressor LacI | - |
| K9U36_RS21875 () | 4483913..4485270 | + | 1358 | WP_085950470.1 | IS3 family transposase ISEcB1 | Transposase |
| K9U36_RS21880 () | 4485360..4486472 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| K9U36_RS21890 () | 4487817..4488968 | - | 1152 | WP_223704531.1 | IS4 family transposase IS10R | Transposase |
| K9U36_RS21895 () | 4488971..4489648 | + | 678 | Protein_4299 | RHS repeat-associated core domain-containing protein | - |
| K9U36_RS21900 () | 4489648..4489974 | + | 327 | WP_000873944.1 | protein YbfB | - |
| K9U36_RS21905 () | 4490076..4491088 | - | 1013 | Protein_4301 | IS3 family transposase IS150 | Transposase |
| K9U36_RS21910 () | 4491136..4492170 | + | 1035 | Protein_4302 | glutamate decarboxylase | - |
| K9U36_RS21915 () | 4492109..4493200 | - | 1092 | Protein_4303 | Elongation factor Tu 2 | VF |
| K9U36_RS21920 () | 4493291..4493398 | - | 108 | WP_000170963.1 | type I toxin-antitoxin system toxin Ldr family protein | Toxin Detail |
| - () | 4493446..4493511 | + | 66 | NuclAT_16 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_16 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_16 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_16 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_19 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_19 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_19 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_19 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_22 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_22 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_22 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_22 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_25 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_25 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_25 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_25 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_28 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_28 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_28 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_28 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_31 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_31 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_31 | - | - |
| - () | 4493446..4493511 | + | 66 | NuclAT_31 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_34 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_34 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_34 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_34 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_37 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_37 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_37 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_37 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_40 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_40 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_40 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_40 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_43 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_43 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_43 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_43 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_46 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_46 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_46 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_46 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_49 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_49 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_49 | - | - |
| - () | 4493446..4493513 | + | 68 | NuclAT_49 | - | - |
| - () | 4493447..4493512 | + | 66 | NuclAT_52 | - | - |
| - () | 4493447..4493512 | + | 66 | NuclAT_52 | - | - |
| - () | 4493447..4493512 | + | 66 | NuclAT_52 | - | - |
| - () | 4493447..4493512 | + | 66 | NuclAT_52 | - | - |
| - () | 4493447..4493512 | + | 66 | NuclAT_55 | - | - |
| - () | 4493447..4493512 | + | 66 | NuclAT_55 | - | - |
| - () | 4493447..4493512 | + | 66 | NuclAT_55 | - | - |
| - () | 4493447..4493512 | + | 66 | NuclAT_55 | - | - |
| K9U36_RS21925 () | 4493826..4493933 | - | 108 | WP_000170963.1 | type I toxin-antitoxin system toxin Ldr family protein | Toxin Detail |
| - | 4493980..4494046 | + | 67 | - | - | Antitoxin Detail |
| K9U36_RS21930 () | 4494270..4494377 | - | 108 | WP_001295224.1 | type I toxin-antitoxin system toxin Ldr family protein | - |
| K9U36_RS21935 () | 4494753..4494860 | - | 108 | WP_001295224.1 | type I toxin-antitoxin system toxin Ldr family protein | - |
| K9U36_RS21940 () | 4495117..4495814 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| K9U36_RS21945 () | 4495830..4496477 | + | 648 | Protein_4309 | Protein RhsC | VF |
| K9U36_RS22135 () | 4496469..4496603 | + | 135 | Protein_4310 | Protein RhsC | VF |
| K9U36_RS22140 () | 4496635..4497135 | - | 501 | WP_263300663.1 | prophage endopeptidase RzpD | - |
| K9U36_RS21965 () | 4497086..4497514 | - | 429 | Protein_4312 | ISAs1 family transposase ISEc1 | Transposase |
| K9U36_RS21970 () | 4497717..4497836 | + | 120 | Protein_4313 | IS3 family transposase | - |
| K9U36_RS21975 () | 4497934..4498086 | + | 153 | WP_000956455.1 | type I toxin-antitoxin system toxin HokE | - |
| K9U36_RS21990 () | 4499058..4499357 | + | 300 | Protein_4315 | lyase | - |
| K9U36_RS22030 () | 4500540..4500821 | - | 282 | Protein_4316 | RHS domain-containing protein | - |
| K9U36_RS22040 () | 4501509..4501625 | - | 117 | Protein_4317 | type VI secretion system tip protein VgrG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|