MGE detailed information
MGE type: Genomic_island MGE length: 16665 bp
Accession: NZ_CP083273 Location: 4210658..4227322 Organism: Escherichia coli strain BL21-RIPL Replicon: chromosome
Accession: NZ_CP083273 Location: 4210658..4227322 Organism: Escherichia coli strain BL21-RIPL Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9U36_RS20365 (4205940) | 4205940..4206914 | + | 975 | WP_001300813.1 | porphobilinogen synthase | - |
| K9U36_RS20370 (4207021) | 4207021..4207872 | - | 852 | WP_000004024.1 | taurine dioxygenase | - |
| K9U36_RS20375 (4207869) | 4207869..4208696 | - | 828 | WP_000114585.1 | taurine ABC transporter permease TauC | - |
| K9U36_RS20380 (4208693) | 4208693..4209460 | - | 768 | WP_000939399.1 | taurine ABC transporter ATP-binding subunit | - |
| K9U36_RS20385 (4209473) | 4209473..4210435 | - | 963 | WP_001018416.1 | taurine ABC transporter substrate-binding protein | - |
| K9U36_RS20390 (4210640) | 4210640..4211011 | + | 372 | WP_012777340.1 | hypothetical protein | - |
| K9U36_RS20395 (4211442) | 4211442..4212578 | + | 1137 | WP_221840786.1 | ISAs1 family transposase ISEc1 | Transposase |
| K9U36_RS20400 (4212619) | 4212619..4213389 | - | 771 | WP_001118052.1 | 2-oxoglutaramate amidase | - |
| K9U36_RS20405 (4213570) | 4213570..4214016 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| K9U36_RS20410 (4214059) | 4214059..4216503 | - | 2445 | WP_000973107.1 | hypothetical protein | VF |
| K9U36_RS20415 (4216743) | 4216743..4217321 | + | 579 | WP_000284050.1 | hypothetical protein | VF |
| K9U36_RS20420 (4217527) | 4217527..4218294 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| K9U36_RS20425 (4218265) | 4218265..4219005 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| K9U36_RS20430 (4219161) | 4219161..4219439 | - | 279 | WP_000615981.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| K9U36_RS20435 (4219442) | 4219442..4219702 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| K9U36_RS20440 (4219888) | 4219888..4220661 | + | 774 | WP_001353765.1 | hypothetical protein | VF |
| K9U36_RS20445 (4220837) | 4220837..4221334 | + | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| K9U36_RS20450 (4221550) | 4221550..4223262 | - | 1713 | Protein_4026 | hypothetical protein | VF |
| K9U36_RS20455 (4223234) | 4223234..4224019 | + | 786 | WP_000207564.1 | hypothetical protein | VF |
| K9U36_RS20460 (4224090) | 4224090..4225145 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| K9U36_RS20465 (4225197) | 4225197..4225490 | + | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| K9U36_RS20470 (4225493) | 4225493..4225891 | + | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| K9U36_RS20475 (4225901) | 4225901..4226353 | + | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| K9U36_RS20480 (4226599) | 4226599..4226802 | + | 204 | Protein_4032 | RtcB family protein | - |
| K9U36_RS20485 (4226801) | 4226801..4227322 | + | 522 | Protein_4033 | peptide chain release factor H | - |
| K9U36_RS20490 (4227379) | 4227379..4228836 | - | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| K9U36_RS20495 (4229097) | 4229097..4229555 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (4230151) | 4230151..4230231 | + | 81 | NuclAT_13 | - | - |
| - (4230151) | 4230151..4230231 | + | 81 | NuclAT_13 | - | - |
| - (4230151) | 4230151..4230231 | + | 81 | NuclAT_13 | - | - |
| - (4230151) | 4230151..4230231 | + | 81 | NuclAT_13 | - | - |
| K9U36_RS20500 (4229647) | 4229647..4230891 | + | 1245 | WP_000189541.1 | esterase FrsA | - |
| K9U36_RS20505 (4230949) | 4230949..4231350 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| K9U36_RS20510 (4231563) | 4231563..4231715 | + | 153 | WP_001135732.1 | type I toxin-antitoxin system toxin HokA | - |
| K9U36_RS20515 (4231692) | 4231692..4231763 | - | 72 | WP_211180513.1 | protein YsaE | - |
| K9U36_RS20520 (4231902) | 4231902..4232114 | - | 213 | WP_000014594.1 | RNA chaperone/antiterminator CspA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|