MGE detailed information
MGE type: Genomic_island MGE length: 14217 bp
Accession: NZ_CP083273 Location: 2842682..2856898 Organism: Escherichia coli strain BL21-RIPL Replicon: chromosome
Accession: NZ_CP083273 Location: 2842682..2856898 Organism: Escherichia coli strain BL21-RIPL Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9U36_RS13635 (2839497) | 2839497..2841182 | - | 1686 | WP_000628583.1 | ABC transporter ATP-binding protein/permease | - |
| K9U36_RS13640 (2841385) | 2841385..2841507 | + | 123 | WP_120795387.1 | protein YneP | - |
| K9U36_RS13645 (2841473) | 2841473..2842630 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| K9U36_RS13650 (2842682) | 2842682..2844364 | - | 1683 | WP_001318307.1 | sulfatase | - |
| K9U36_RS13655 (2844766) | 2844766..2845527 | - | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| K9U36_RS13660 (2845602) | 2845602..2845799 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| K9U36_RS13665 (2846047) | 2846047..2848326 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| K9U36_RS13670 (2848660) | 2848660..2849574 | - | 915 | WP_000520676.1 | hypothetical protein | VF |
| K9U36_RS13675 (2849633) | 2849633..2850136 | - | 504 | WP_000825452.1 | hypothetical protein | VF |
| K9U36_RS13680 (2850149) | 2850149..2850679 | - | 531 | WP_000876763.1 | hypothetical protein | VF |
| K9U36_RS13685 (2850693) | 2850693..2853343 | - | 2651 | Protein_2702 | fimbrial biogenesis outer membrane usher protein | - |
| K9U36_RS13690 (2853385) | 2853385..2854095 | - | 711 | Protein_2703 | hypothetical protein | VF |
| K9U36_RS13695 (2854456) | 2854456..2854938 | - | 483 | WP_000931227.1 | hypothetical protein | VF |
| K9U36_RS13700 (2855310) | 2855310..2856632 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| K9U36_RS13705 (2856632) | 2856632..2856898 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| K9U36_RS13710 (2857121) | 2857121..2858701 | - | 1581 | Protein_2707 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| K9U36_RS13715 (2858697) | 2858697..2859473 | + | 777 | Protein_2708 | histidine kinase | - |
| K9U36_RS13720 (2859485) | 2859485..2860507 | + | 1023 | WP_000172488.1 | autoinducer 2 ABC transporter substrate-binding protein LsrB | - |
| K9U36_RS13725 (2860534) | 2860534..2861409 | + | 876 | WP_000774188.1 | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | - |
| K9U36_RS13730 (2861433) | 2861433..2861723 | + | 291 | WP_000558527.1 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.009 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.009 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.009 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.009 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.009 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.009 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.009 |