MGE detailed information
MGE type: Genomic_island MGE length: 40958 bp
Accession: NZ_CP082929 Location: 3543516..3584473 Organism: Salmonella enterica subsp. enterica serovar London isolate N18-04674 Replicon: chromosome
Accession: NZ_CP082929 Location: 3543516..3584473 Organism: Salmonella enterica subsp. enterica serovar London isolate N18-04674 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6991_RS17215 () | 3539087..3541531 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| K6991_RS17220 () | 3541640..3542407 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| K6991_RS17225 () | 3542778..3543185 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| K6991_RS17230 () | 3543516..3544235 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| K6991_RS17235 () | 3544239..3544454 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| K6991_RS17240 () | 3544574..3545521 | - | 948 | WP_263258413.1 | LysR family transcriptional regulator | - |
| K6991_RS17245 () | 3546015..3546255 | - | 241 | Protein_3374 | PerC family transcriptional regulator | - |
| K6991_RS17250 () | 3546338..3547159 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| K6991_RS17255 () | 3547565..3548035 | - | 471 | WP_023255137.1 | AfaD family invasin | - |
| K6991_RS17260 () | 3548057..3550567 | - | 2511 | WP_023255136.1 | F1 capsule-anchoring protein | VF |
| K6991_RS17265 () | 3550591..3551328 | - | 738 | WP_058805822.1 | Chaperone protein caf1M | VF |
| K6991_RS17270 () | 3551412..3551906 | - | 495 | WP_058805823.1 | pilus assembly protein | - |
| K6991_RS17275 () | 3552671..3553372 | - | 702 | Protein_3380 | integrase core domain-containing protein | - |
| K6991_RS17280 () | 3553425..3553739 | + | 315 | WP_011233128.1 | SymE family type I addiction module toxin | - |
| K6991_RS17285 () | 3553806..3554084 | - | 279 | WP_077905025.1 | hypothetical protein | - |
| K6991_RS17290 () | 3554400..3554867 | - | 468 | WP_000828173.1 | sugar tyrosine-protein kinase | - |
| K6991_RS17295 () | 3555739..3555972 | - | 234 | WP_129374720.1 | hypothetical protein | - |
| - | 3556149..3556530 | - | 382 | - | - | Antitoxin Detail |
| K6991_RS17300 () | 3556306..3556581 | + | 276 | WP_058805824.1 | SymE family type I addiction module toxin | Toxin Detail |
| K6991_RS17305 () | 3556626..3556943 | - | 318 | WP_129374721.1 | hypothetical protein | - |
| K6991_RS17310 () | 3556909..3558192 | - | 1284 | Protein_3387 | tRNA nuclease WapA | VF |
| K6991_RS17315 () | 3558329..3558793 | - | 465 | WP_223152163.1 | hypothetical protein | - |
| K6991_RS17320 () | 3558771..3561602 | - | 2832 | WP_058805826.1 | RHS repeat-associated core domain-containing protein | - |
| K6991_RS17325 () | 3561653..3561931 | + | 279 | Protein_3390 | type I toxin-antitoxin system SymE family toxin | - |
| K6991_RS17330 () | 3562090..3562956 | - | 867 | WP_049868168.1 | leucine-rich repeat domain-containing protein | - |
| K6991_RS17335 () | 3562947..3567047 | - | 4101 | WP_223195405.1 | RHS repeat-associated core domain-containing protein | - |
| K6991_RS17340 () | 3567066..3567513 | - | 448 | Protein_3393 | DcrB-related protein | - |
| K6991_RS17345 () | 3567537..3569726 | - | 2190 | WP_058805827.1 | Actin cross-linking toxin VgrG1 | VF |
| K6991_RS17350 () | 3570123..3570644 | - | 522 | WP_077946913.1 | DUF2778 domain-containing protein | - |
| K6991_RS17355 () | 3570668..3571084 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| K6991_RS17360 () | 3571081..3571176 | - | 96 | Protein_3397 | hypothetical protein | - |
| K6991_RS17365 () | 3571212..3571673 | - | 462 | WP_001674711.1 | hypothetical protein | - |
| K6991_RS17370 () | 3571658..3572128 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| K6991_RS17375 () | 3572171..3572938 | - | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| K6991_RS17380 () | 3572938..3576807 | - | 3870 | WP_058805828.1 | hypothetical protein | VF |
| K6991_RS17385 () | 3576841..3577272 | - | 432 | WP_000227044.1 | Shiga toxin A subunit | - |
| K6991_RS17390 () | 3577474..3578247 | - | 774 | WP_023197900.1 | Rap1a/Tai family immunity protein | - |
| K6991_RS17395 () | 3578252..3579556 | - | 1305 | WP_000132483.1 | Outer membrane porin F | VF |
| K6991_RS17400 () | 3579553..3580896 | - | 1344 | WP_000118729.1 | hypothetical protein | VF |
| K6991_RS17405 () | 3580900..3581436 | - | 537 | WP_023255344.1 | hypothetical protein | VF |
| K6991_RS17410 () | 3581503..3581988 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| K6991_RS17415 () | 3582131..3582514 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| K6991_RS17420 () | 3582499..3582984 | - | 486 | WP_058805829.1 | type VI secretion system amidase effector protein Tae4 | - |
| K6991_RS17425 () | 3583027..3583220 | - | 194 | Protein_3410 | type VI secretion system lipoprotein TssJ | - |
| K6991_RS17430 () | 3583288..3583773 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| K6991_RS17435 () | 3584027..3584359 | - | 333 | WP_077905251.1 | hypothetical protein | - |
| K6991_RS17440 () | 3584486..3584596 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| K6991_RS17445 () | 3584659..3586167 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| K6991_RS17450 () | 3586191..3586733 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| K6991_RS17455 () | 3586833..3589472 | - | 2640 | WP_058805830.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|