MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 59361 bp
Accession: NZ_CP082917 Location: 1..59361 Organism: Salmonella enterica subsp. enterica serovar Newlands strain ZC-S1 3rd Replicon: plasmid p_ZC-S1_3rd
Accession: NZ_CP082917 Location: 1..59361 Organism: Salmonella enterica subsp. enterica serovar Newlands strain ZC-S1 3rd Replicon: plasmid p_ZC-S1_3rd
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8862_RS22755 (K8862_22650) | 200..1225 | + | 1026 | WP_077907510.1 | ExeA family protein | - |
| K8862_RS22760 (K8862_22655) | 1414..2451 | - | 1038 | WP_001121400.1 | IS630 family transposase ISEc33 | Transposase |
| K8862_RS22765 (K8862_22660) | 3059..3952 | + | 894 | WP_000346690.1 | virulence genes transcriptional activator SpvR | - |
| K8862_RS22770 (K8862_22665) | 4126..4290 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| K8862_RS22775 (K8862_22670) | 4464..5231 | + | 768 | WP_001676649.1 | virulence protein SpvA | - |
| K8862_RS22780 (K8862_22675) | 5194..5361 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| K8862_RS22785 (K8862_22680) | 5413..7188 | + | 1776 | WP_001676648.1 | Mono(ADP-ribosyl)transferase SpvB | VF |
| K8862_RS22790 (K8862_22685) | 7469..8194 | + | 726 | WP_001122242.1 | MAPK phosphothreonine lyase | VF |
| K8862_RS22795 (K8862_22690) | 8456..9106 | + | 651 | WP_001676646.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| K8862_RS22800 (K8862_22695) | 9233..9658 | - | 426 | WP_000064919.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| K8862_RS22805 (K8862_22700) | 9715..10065 | + | 351 | WP_001541541.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| K8862_RS22810 (K8862_22705) | 10132..10692 | - | 561 | WP_000900095.1 | Invasin | VF |
| K8862_RS22815 (K8862_22710) | 10848..11135 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| K8862_RS22820 (K8862_22715) | 11412..11897 | - | 486 | WP_000905606.1 | membrane protein | - |
| K8862_RS22825 (K8862_22720) | 11891..12379 | - | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| K8862_RS22830 (K8862_22725) | 12404..13117 | - | 714 | WP_000545756.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| K8862_RS22835 (K8862_22730) | 13126..13908 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| K8862_RS22840 (K8862_22735) | 13943..14464 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| K8862_RS22845 (K8862_22740) | 14461..14751 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| K8862_RS22850 (K8862_22745) | 14753..15058 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| K8862_RS22855 (K8862_22750) | 15060..15278 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| K8862_RS22860 (K8862_22755) | 15954..16475 | + | 522 | WP_077681952.1 | hypothetical protein | - |
| K8862_RS22865 (K8862_22760) | 16519..16947 | - | 429 | Protein_23 | hypothetical protein | - |
| K8862_RS22870 (K8862_22765) | 16959..17254 | + | 296 | Protein_24 | cytoplasmic protein | - |
| K8862_RS22875 (K8862_22770) | 17748..18737 | + | 990 | WP_000461382.1 | RepB family plasmid replication initiator protein | - |
| K8862_RS22880 (K8862_22775) | 19106..19225 | - | 120 | Protein_26 | recombinase | - |
| K8862_RS22885 (K8862_22780) | 19278..19664 | - | 387 | WP_000751876.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| K8862_RS22890 (K8862_22785) | 20031..20342 | - | 312 | WP_015059605.1 | hypothetical protein | - |
| K8862_RS22895 (K8862_22790) | 20371..20673 | + | 303 | WP_000979451.1 | Major pilu subunit operon regulatory protein PapB | VF |
| K8862_RS22900 (K8862_22795) | 20948..21472 | + | 525 | WP_000748204.1 | hypothetical protein | VF |
| K8862_RS22905 (K8862_22800) | 21699..24107 | + | 2409 | WP_000007891.1 | Outer membrane usher protein FimD | VF |
| K8862_RS22910 (K8862_22805) | 24100..24792 | + | 693 | WP_001038509.1 | Chaperone protein FaeE | VF |
| K8862_RS22915 (K8862_22810) | 24789..25367 | + | 579 | WP_000085742.1 | hypothetical protein | - |
| K8862_RS22920 (K8862_22815) | 25463..26404 | + | 942 | WP_223156944.1 | hypothetical protein | - |
| K8862_RS22925 (K8862_22820) | 26664..26876 | + | 213 | WP_000004289.1 | hypothetical protein | VF |
| K8862_RS22930 (K8862_22825) | 26861..27211 | + | 351 | WP_000135399.1 | Transcriptional regulatory protein RcsB | VF |
| K8862_RS22935 (K8862_22830) | 27455..28111 | + | 657 | WP_077907617.1 | DsbA family protein | - |
| K8862_RS22940 (K8862_22835) | 28101..28247 | + | 147 | WP_001141717.1 | hypothetical protein | - |
| K8862_RS22945 (K8862_22840) | 28298..29143 | + | 846 | WP_001701740.1 | YjiK family protein | - |
| K8862_RS22950 (K8862_22845) | 29233..29790 | + | 558 | WP_000725064.1 | Attachment invasion locus protein | VF |
| K8862_RS22955 (K8862_22850) | 30056..30802 | + | 747 | WP_000417897.1 | AraC family transcriptional regulator | - |
| K8862_RS22960 (K8862_22855) | 30899..31093 | - | 195 | Protein_42 | SdiA-regulated domain-containing protein | - |
| K8862_RS22965 (K8862_22860) | 31976..32857 | - | 882 | WP_001676666.1 | incFII family plasmid replication initiator RepA | - |
| K8862_RS22970 (K8862_22865) | 32838..32915 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| K8862_RS22975 (K8862_22870) | 33165..33431 | - | 267 | WP_016710725.1 | replication regulatory protein RepA | - |
| K8862_RS22980 | 33542..34102 | - | 561 | Protein_46 | phospholipase D family protein | - |
| K8862_RS22985 | 34383..34664 | - | 282 | Protein_47 | disulfide bond formation protein DsbA | - |
| K8862_RS22990 (K8862_22890) | 34781..35203 | - | 423 | Protein_48 | fertility inhibition protein FinO | - |
| K8862_RS22995 (K8862_22895) | 35283..35797 | - | 515 | Protein_49 | type IV conjugative transfer system lipoprotein TraV | - |
| K8862_RS23000 (K8862_22900) | 35794..36018 | - | 225 | WP_016716015.1 | DUF2689 domain-containing protein | - |
| K8862_RS23005 (K8862_22905) | 35996..36592 | - | 597 | WP_000527901.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| K8862_RS23010 (K8862_22910) | 36582..38003 | - | 1422 | WP_000146697.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| K8862_RS23015 (K8862_22915) | 38003..38743 | - | 741 | WP_001230718.1 | type-F conjugative transfer system secretin TraK | - |
| K8862_RS23020 (K8862_22920) | 38730..39296 | - | 567 | WP_001679518.1 | type IV conjugative transfer system protein TraE | - |
| K8862_RS23025 (K8862_22925) | 39318..39629 | - | 312 | WP_000012130.1 | type IV conjugative transfer system protein TraL | - |
| K8862_RS23030 (K8862_22930) | 39644..40006 | - | 363 | WP_001274199.1 | type IV conjugative transfer system pilin TraA | - |
| K8862_RS23035 (K8862_22935) | 40048..40275 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| K8862_RS23040 (K8862_22940) | 40369..41054 | - | 686 | Protein_58 | PAS domain-containing protein | - |
| K8862_RS23045 (K8862_22945) | 41248..41628 | - | 381 | WP_001151546.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| K8862_RS23050 (K8862_22950) | 42044..42514 | + | 471 | WP_015056628.1 | hypothetical protein | VF |
| K8862_RS23055 (K8862_22955) | 42825..43643 | - | 819 | Protein_61 | DUF945 domain-containing protein | - |
| K8862_RS23060 (K8862_22960) | 43746..43904 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| K8862_RS23215 | 43990..44118 | - | 129 | WP_000372430.1 | hypothetical protein | - |
| K8862_RS23065 (K8862_22965) | 44153..44809 | - | 657 | Protein_64 | plasmid SOS inhibition protein A | - |
| K8862_RS23070 | 44812..44913 | - | 102 | Protein_65 | conjugation system SOS inhibitor PsiB | - |
| K8862_RS23075 (K8862_22975) | 44953..46674 | - | 1722 | Protein_66 | ParB/RepB/Spo0J family partition protein | - |
| K8862_RS23080 (K8862_22980) | 46975..47397 | + | 423 | WP_000925628.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| K8862_RS23085 (K8862_22985) | 47397..48671 | + | 1275 | WP_000457542.1 | Y-family DNA polymerase | - |
| K8862_RS23090 (K8862_22990) | 48753..49727 | - | 975 | WP_000064277.1 | ParB family protein | - |
| K8862_RS23095 (K8862_22995) | 49727..50932 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| K8862_RS23100 (K8862_23000) | 51347..52288 | + | 942 | WP_000728919.1 | Recombination-promoting nuclease RpnA | VF |
| K8862_RS23105 (K8862_23005) | 52285..52890 | - | 606 | WP_000176303.1 | DUF2913 family protein | - |
| K8862_RS23110 (K8862_23010) | 52947..53352 | - | 406 | Protein_73 | hypothetical protein | - |
| K8862_RS23115 (K8862_23015) | 53455..53871 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| K8862_RS23120 (K8862_23020) | 53957..55072 | - | 1116 | WP_001247117.1 | DNA-binding protein | - |
| K8862_RS23125 (K8862_23025) | 55330..55818 | + | 489 | WP_001135409.1 | hypothetical protein | - |
| K8862_RS23130 (K8862_23030) | 56473..57213 | + | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| K8862_RS23135 (K8862_23035) | 57420..57980 | + | 561 | WP_001240330.1 | Tn3 family transposase TnBth3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|