MGE detailed information
MGE type: Prophage MGE length: 11872 bp
Accession: NZ_CP082916 Location: 23671..35542 Organism: Salmonella enterica subsp. enterica serovar Newlands strain ZC-S1 3rd Replicon: chromosome
Accession: NZ_CP082916 Location: 23671..35542 Organism: Salmonella enterica subsp. enterica serovar Newlands strain ZC-S1 3rd Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8862_RS00100 () | 22003..22437 | + | 435 | WP_001082296.1 | universal stress protein UspF | - |
| K8862_RS00105 () | 22487..22825 | - | 339 | WP_000159240.1 | SMR family transporter | - |
| K8862_RS00110 () | 22926..23129 | + | 204 | Protein_21 | tyrosine-type recombinase/integrase | - |
| K8862_RS00115 () | 23465..23638 | - | 174 | WP_000729249.1 | hypothetical protein | - |
| K8862_RS00120 () | 23671..24216 | - | 546 | WP_000802786.1 | glycosyl hydrolase 108 family protein | - |
| K8862_RS00125 () | 24213..24494 | - | 282 | WP_000445513.1 | phage holin family protein | - |
| K8862_RS00130 () | 24484..24672 | - | 189 | WP_001688615.1 | putative holin | - |
| K8862_RS00135 () | 24666..24989 | - | 324 | Protein_26 | tellurite/colicin resistance protein | - |
| K8862_RS00140 () | 27160..27696 | - | 537 | WP_000640113.1 | DUF1133 family protein | - |
| K8862_RS00145 () | 27693..27983 | - | 291 | WP_000774470.1 | DUF1364 domain-containing protein | - |
| K8862_RS00150 () | 27983..28582 | - | 600 | WP_000940751.1 | DUF1367 family protein | - |
| K8862_RS00155 () | 28645..28815 | - | 171 | WP_000734094.1 | hypothetical protein | - |
| K8862_RS00160 () | 29106..29261 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 29273..29331 | + | 59 | - | - | Antitoxin Detail |
| K8862_RS00165 () | 29688..30620 | + | 933 | WP_000556390.1 | hypothetical protein | - |
| K8862_RS00170 () | 30617..31171 | + | 555 | WP_001033796.1 | hypothetical protein | - |
| K8862_RS00175 () | 31333..31662 | - | 330 | WP_001676916.1 | DUF977 family protein | - |
| K8862_RS23140 () | 31706..31753 | - | 48 | Protein_35 | hypothetical protein | - |
| K8862_RS00185 () | 31935..32402 | + | 468 | WP_001227859.1 | helix-turn-helix domain-containing protein | - |
| K8862_RS00190 () | 32787..32942 | + | 156 | WP_085981757.1 | DUF1391 family protein | - |
| K8862_RS00195 () | 33050..33571 | - | 522 | WP_000004762.1 | super-infection exclusion protein B | - |
| K8862_RS00200 () | 34009..34230 | + | 222 | WP_000560208.1 | cell division protein FtsZ | - |
| K8862_RS00205 () | 34315..34632 | + | 318 | WP_000800272.1 | hypothetical protein | - |
| K8862_RS00210 () | 34660..35277 | + | 618 | WP_001676915.1 | exodeoxyribonuclease | - |
| K8862_RS00215 () | 35258..35542 | + | 285 | Protein_42 | tyrosine-type recombinase/integrase | - |
| K8862_RS00220 () | 35594..36529 | + | 936 | WP_001156217.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| K8862_RS00225 () | 36573..37946 | - | 1374 | WP_000123686.1 | ATP-dependent RNA helicase DbpA | - |
| K8862_RS00230 () | 38433..39416 | - | 984 | WP_000387374.1 | zinc transporter ZntB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|