MGE detailed information
MGE type: Conjugative plasmid MGE length: 106249 bp
Accession: NZ_CP082829 Location: 1..106249 Organism: Escherichia coli strain SCAID WND2-2021 (3/145) Replicon: plasmid unnamed2
Accession: NZ_CP082829 Location: 1..106249 Organism: Escherichia coli strain SCAID WND2-2021 (3/145) Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8B73_RS25485 (101) | 101..1525 | + | 1425 | WP_106493749.1 | hypothetical protein | VF |
| K8B73_RS25495 (2845) | 2845..3159 | - | 315 | WP_225933823.1 | hypothetical protein | - |
| K8B73_RS25500 (3158) | 3158..4312 | + | 1155 | WP_223107162.1 | site-specific integrase | - |
| K8B73_RS25505 (4463) | 4463..5287 | + | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| K8B73_RS25510 (5372) | 5372..6574 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| K8B73_RS25515 (6634) | 6634..7218 | + | 585 | WP_000977525.1 | histidine phosphatase family protein | - |
| K8B73_RS25520 (7613) | 7613..8071 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| K8B73_RS25525 (8068) | 8068..8885 | + | 818 | Protein_8 | hypothetical protein | VF |
| K8B73_RS25530 (8882) | 8882..10030 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| K8B73_RS25535 (10027) | 10027..10317 | + | 291 | WP_001314267.1 | hypothetical protein | - |
| K8B73_RS25540 (10332) | 10332..10883 | + | 552 | WP_000014586.1 | Phospholipase D | VF |
| K8B73_RS25545 (10973) | 10973..14739 | + | 3767 | Protein_12 | DUF5710 domain-containing protein | - |
| K8B73_RS25550 (14757) | 14757..15104 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| K8B73_RS25555 (15101) | 15101..15793 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| K8B73_RS25560 (15804) | 15804..16787 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| K8B73_RS25565 (16790) | 16790..18079 | + | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| K8B73_RS25570 (18079) | 18079..18783 | + | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| K8B73_RS25575 (18783) | 18783..19310 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| K8B73_RS25580 (19361) | 19361..19765 | + | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| K8B73_RS25585 (19829) | 19829..20017 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| K8B73_RS25590 (20001) | 20001..20801 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| K8B73_RS25595 (20891) | 20891..23935 | + | 3045 | WP_023518848.1 | IncI1-type conjugal transfer protein TraU | - |
| K8B73_RS25600 (23935) | 23935..24549 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| K8B73_RS25605 (24516) | 24516..25718 | + | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| K8B73_RS25610 (25747) | 25747..26331 | + | 585 | WP_001746157.1 | IncI1-type conjugal transfer protein TraX | - |
| K8B73_RS25615 (26428) | 26428..28596 | + | 2169 | WP_023518847.1 | DotA/TraY family protein | - |
| K8B73_RS25620 (28667) | 28667..29329 | + | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| K8B73_RS25625 (29401) | 29401..29610 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| K8B73_RS25630 (30002) | 30002..30178 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| K8B73_RS25635 (30243) | 30243..30539 | - | 297 | WP_011264046.1 | DinQ-like type I toxin DqlB | - |
| K8B73_RS25640 (30839) | 30839..31090 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| K8B73_RS25645 (31162) | 31162..31314 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (31366) | 31366..31426 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (31366) | 31366..31426 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (31366) | 31366..31426 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (31366) | 31366..31426 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| K8B73_RS25650 (31635) | 31635..32720 | + | 1086 | WP_074446708.1 | protein finQ | - |
| - (32790) | 32790..32847 | + | 58 | NuclAT_1 | - | - |
| - (32790) | 32790..32847 | + | 58 | NuclAT_1 | - | - |
| - (32790) | 32790..32847 | + | 58 | NuclAT_1 | - | - |
| - (32790) | 32790..32847 | + | 58 | NuclAT_1 | - | - |
| K8B73_RS25655 (33027) | 33027..34235 | + | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| K8B73_RS25660 (34254) | 34254..35324 | + | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| K8B73_RS25665 (35317) | 35317..37608 | + | 2292 | WP_011264051.1 | F-type conjugative transfer protein TrbC | - |
| K8B73_RS25670 (37646) | 37646..40345 | - | 2700 | WP_011264053.1 | Protein TraI | Relaxase |
| K8B73_RS25675 (40356) | 40356..40688 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| K8B73_RS25680 (40922) | 40922..41257 | + | 336 | WP_021529212.1 | hypothetical protein | - |
| K8B73_RS25685 (41344) | 41344..42192 | - | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| K8B73_RS25690 (42773) | 42773..43024 | + | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| K8B73_RS25695 (43055) | 43055..43261 | - | 207 | WP_000150314.1 | hypothetical protein | VF |
| K8B73_RS25700 (43323) | 43323..44225 | - | 903 | WP_000038347.1 | Recombination-promoting nuclease RpnA | VF |
| K8B73_RS25705 (44222) | 44222..44611 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| K8B73_RS25710 (44788) | 44788..45054 | - | 267 | WP_000804663.1 | hypothetical protein | - |
| K8B73_RS25715 (45148) | 45148..45582 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| K8B73_RS25720 (46311) | 46311..46811 | - | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| K8B73_RS25725 (47273) | 47273..47869 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| K8B73_RS25730 (47866) | 47866..48585 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| K8B73_RS25735 (48582) | 48582..49016 | - | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| K8B73_RS25740 (49069) | 49069..51027 | - | 1959 | WP_011264061.1 | ParB/RepB/Spo0J family partition protein | - |
| K8B73_RS25745 (51086) | 51086..51319 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| K8B73_RS25750 (51377) | 51377..51904 | - | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| K8B73_RS25755 (52288) | 52288..52602 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| K8B73_RS25760 (52673) | 52673..52864 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| K8B73_RS25765 (52861) | 52861..53283 | - | 423 | WP_009426926.1 | DUF1380 family protein | - |
| K8B73_RS25770 (53330) | 53330..53755 | - | 426 | WP_225526314.1 | antirestriction protein | - |
| K8B73_RS25775 (54168) | 54168..54938 | - | 771 | WP_096947577.1 | hypothetical protein | - |
| K8B73_RS25780 (54983) | 54983..55501 | - | 519 | WP_202864534.1 | DUF1380 family protein | - |
| K8B73_RS25785 (55431) | 55431..55652 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| K8B73_RS25790 (55653) | 55653..56336 | - | 684 | WP_000086127.1 | DNA methylase | - |
| K8B73_RS25795 (56412) | 56412..56723 | - | 312 | WP_033863049.1 | hypothetical protein | - |
| K8B73_RS25800 (56727) | 56727..57149 | - | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| K8B73_RS25805 (57152) | 57152..58132 | - | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| K8B73_RS25810 (58470) | 58470..58805 | + | 336 | WP_001340323.1 | hypothetical protein | - |
| K8B73_RS26485 (58810) | 58810..58896 | - | 87 | Protein_66 | hypothetical protein | - |
| K8B73_RS25815 (58900) | 58900..59802 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| K8B73_RS25820 (60220) | 60220..60468 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| K8B73_RS25825 (60465) | 60465..60902 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| K8B73_RS25830 (60902) | 60902..62173 | + | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| K8B73_RS25835 (62369) | 62369..62995 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| K8B73_RS25840 (62992) | 62992..63294 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| K8B73_RS25845 (63850) | 63850..65063 | + | 1214 | WP_223107158.1 | IS3 family transposase IS629 | Transposase |
| K8B73_RS25850 (65130) | 65130..66476 | - | 1347 | WP_001703911.1 | protein YagA | - |
| K8B73_RS25855 (66830) | 66830..67432 | + | 603 | WP_223107159.1 | ProQ/FINO family protein | - |
| K8B73_RS25860 (67488) | 67488..67997 | + | 510 | WP_012783913.1 | hypothetical protein | - |
| K8B73_RS25865 (68230) | 68230..68370 | - | 141 | WP_032072206.1 | hypothetical protein | - |
| K8B73_RS25870 (69068) | 69068..70099 | - | 1032 | WP_223107160.1 | plasmid replication initiator RepA | - |
| K8B73_RS26490 (71057) | 71057..71215 | + | 159 | Protein_79 | ash family protein | - |
| K8B73_RS25880 (71253) | 71253..71540 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| K8B73_RS25885 (71982) | 71982..72515 | + | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| K8B73_RS25890 (72769) | 72769..73452 | + | 684 | WP_069896525.1 | conjugal transfer protein TraC | - |
| K8B73_RS25895 (73625) | 73625..74176 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| K8B73_RS25900 (74338) | 74338..74592 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| K8B73_RS25905 (74759) | 74759..75055 | + | 297 | WP_000494780.1 | hypothetical protein | - |
| K8B73_RS25910 (75679) | 75679..76746 | + | 1068 | WP_012783947.1 | hypothetical protein | VF |
| K8B73_RS25915 (76746) | 76746..77183 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| K8B73_RS25920 (77197) | 77197..78879 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| K8B73_RS25925 (78872) | 78872..80167 | + | 1296 | WP_001388364.1 | type 4b pilus protein PilO2 | - |
| K8B73_RS25930 (80154) | 80154..80606 | + | 453 | WP_001247870.1 | hypothetical protein | VF |
| K8B73_RS25935 (80617) | 80617..82170 | + | 1554 | WP_001492932.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| K8B73_RS25940 (82183) | 82183..83280 | + | 1098 | WP_106493748.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| K8B73_RS25945 (83298) | 83298..83912 | + | 615 | WP_048257183.1 | hypothetical protein | VF |
| K8B73_RS25950 (83922) | 83922..84482 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| K8B73_RS25955 (84467) | 84467..85123 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| K8B73_RS25960 (85123) | 85123..86550 | + | 1428 | WP_223107161.1 | hypothetical protein | VF |
| K8B73_RS25965 (86543) | 86543..86766 | - | 224 | Protein_97 | hypothetical protein | - |
| K8B73_RS25970 (87863) | 87863..88180 | - | 318 | WP_001558195.1 | hypothetical protein | - |
| K8B73_RS25975 (88179) | 88179..89333 | + | 1155 | WP_223107162.1 | site-specific integrase | - |
| K8B73_RS25980 (89484) | 89484..90308 | + | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| K8B73_RS25985 (90393) | 90393..91595 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| K8B73_RS25990 (91655) | 91655..92239 | + | 585 | WP_000977525.1 | histidine phosphatase family protein | - |
| K8B73_RS25995 (92634) | 92634..93092 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| K8B73_RS26000 (93089) | 93089..93907 | + | 819 | WP_213855782.1 | hypothetical protein | VF |
| K8B73_RS26005 (93904) | 93904..95052 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| K8B73_RS26010 (95049) | 95049..95339 | + | 291 | WP_001314267.1 | hypothetical protein | - |
| K8B73_RS26015 (95439) | 95439..95906 | + | 468 | WP_000567458.1 | Phospholipase D | VF |
| K8B73_RS26495 (95995) | 95995..97833 | + | 1839 | WP_225933818.1 | DUF5710 domain-containing protein | - |
| K8B73_RS26500 (97923) | 97923..98720 | + | 798 | WP_225933819.1 | hypothetical protein | - |
| K8B73_RS26505 (98829) | 98829..98984 | + | 156 | WP_225933820.1 | hypothetical protein | - |
| K8B73_RS26510 (99145) | 99145..99786 | + | 642 | WP_225933821.1 | hypothetical protein | - |
| K8B73_RS26025 (99773) | 99773..100120 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| K8B73_RS26030 (100117) | 100117..100809 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| K8B73_RS26035 (100820) | 100820..101801 | + | 982 | Protein_114 | hypothetical protein | VF |
| K8B73_RS26515 (102653) | 102653..102796 | + | 144 | WP_225933822.1 | hypothetical protein | VF |
| K8B73_RS26520 (102835) | 102835..103266 | + | 432 | WP_264081470.1 | Type II secretion system protein E | VF |
| K8B73_RS26585 (103272) | 103272..103397 | + | 126 | WP_264081471.1 | hypothetical protein | - |
| K8B73_RS26045 (103410) | 103410..104507 | + | 1098 | Protein_118 | Toxin coregulated pilus biosynthesis protein E | VF |
| K8B73_RS26050 (104525) | 104525..105139 | + | 615 | WP_223107163.1 | hypothetical protein | VF |
| K8B73_RS26055 (105149) | 105149..105709 | + | 561 | WP_223107165.1 | lytic transglycosylase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|