MGE detailed information
MGE type: Conjugative plasmid MGE length: 139267 bp
Accession: NZ_CP082828 Location: 1..139267 Organism: Escherichia coli strain SCAID WND2-2021 (3/145) Replicon: plasmid unnamed1
Accession: NZ_CP082828 Location: 1..139267 Organism: Escherichia coli strain SCAID WND2-2021 (3/145) Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8B73_RS24640 (187) | 187..639 | - | 453 | WP_024185774.1 | hypothetical protein | - |
| K8B73_RS24645 (941) | 941..1468 | + | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| K8B73_RS24650 (1525) | 1525..1758 | + | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| K8B73_RS24655 (1817) | 1817..3775 | + | 1959 | WP_001145501.1 | ParB/RepB/Spo0J family partition protein | - |
| K8B73_RS24660 (3830) | 3830..4264 | + | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| K8B73_RS24665 (4261) | 4261..5024 | + | 764 | Protein_6 | plasmid SOS inhibition protein A | - |
| - (4992) | 4992..5191 | + | 200 | NuclAT_0 | - | - |
| - (4992) | 4992..5191 | + | 200 | NuclAT_0 | - | - |
| - (4992) | 4992..5191 | + | 200 | NuclAT_0 | - | - |
| - (4992) | 4992..5191 | + | 200 | NuclAT_0 | - | - |
| K8B73_RS26470 (5198) | 5198..5347 | + | 150 | Protein_7 | DUF5431 family protein | - |
| K8B73_RS24670 (5289) | 5289..5414 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| K8B73_RS26475 (5732) | 5732..6029 | - | 298 | Protein_9 | hypothetical protein | - |
| K8B73_RS24675 (6330) | 6330..6617 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| K8B73_RS24680 (6736) | 6736..7557 | + | 822 | WP_001234489.1 | DUF932 domain-containing protein | - |
| K8B73_RS24685 (7853) | 7853..8455 | - | 603 | WP_001323326.1 | transglycosylase SLT domain-containing protein | - |
| K8B73_RS24690 (8786) | 8786..9169 | + | 384 | WP_001151562.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| K8B73_RS24695 (9363) | 9363..10049 | + | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| K8B73_RS24700 (10143) | 10143..10370 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| K8B73_RS24705 (10404) | 10404..10763 | + | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| K8B73_RS24710 (10778) | 10778..11089 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| K8B73_RS24715 (11111) | 11111..11677 | + | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| K8B73_RS24720 (11664) | 11664..12392 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| K8B73_RS24725 (12392) | 12392..13819 | + | 1428 | WP_000146665.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| K8B73_RS24730 (13809) | 13809..14399 | + | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| K8B73_RS24735 (14386) | 14386..14706 | + | 321 | WP_001057275.1 | conjugal transfer protein TrbD | - |
| K8B73_RS24740 (14699) | 14699..14951 | + | 253 | Protein_23 | conjugal transfer protein TrbG | - |
| K8B73_RS24745 (14948) | 14948..15463 | + | 516 | WP_000809888.1 | type IV conjugative transfer system lipoprotein TraV | - |
| K8B73_RS24750 (15598) | 15598..15819 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| K8B73_RS24755 (15812) | 15812..16285 | + | 474 | WP_000549566.1 | hypothetical protein | - |
| K8B73_RS24760 (16365) | 16365..16583 | + | 219 | WP_000556746.1 | hypothetical protein | - |
| K8B73_RS24765 (16950) | 16950..19580 | + | 2631 | WP_000069778.1 | type IV secretion system protein TraC | - |
| K8B73_RS24770 (19577) | 19577..19963 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| K8B73_RS24775 (19960) | 19960..20592 | + | 633 | WP_001203736.1 | type-F conjugative transfer system protein TraW | - |
| K8B73_RS24780 (20589) | 20589..21581 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| K8B73_RS24785 (21611) | 21611..21916 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| K8B73_RS24790 (21925) | 21925..22563 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| K8B73_RS24795 (22560) | 22560..24410 | + | 1851 | WP_000821859.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| K8B73_RS24800 (24437) | 24437..24694 | + | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| K8B73_RS24805 (24687) | 24687..25430 | + | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| K8B73_RS24810 (25444) | 25444..25782 | + | 339 | WP_223107156.1 | conjugal transfer protein TrbA | - |
| K8B73_RS24815 (25763) | 25763..26098 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| K8B73_RS24820 (26179) | 26179..26463 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| K8B73_RS24825 (26450) | 26450..26995 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| K8B73_RS24830 (26925) | 26925..27272 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| K8B73_RS24835 (27253) | 27253..27645 | + | 393 | WP_000660700.1 | F-type conjugal transfer protein TrbF | - |
| K8B73_RS24840 (27632) | 27632..29005 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| K8B73_RS24845 (29002) | 29002..31824 | + | 2823 | WP_001007080.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| K8B73_RS24850 (31840) | 31840..32325 | + | 486 | WP_000605869.1 | hypothetical protein | - |
| K8B73_RS24855 (32374) | 32374..33105 | + | 732 | WP_000782451.1 | conjugal transfer complement resistance protein TraT | - |
| K8B73_RS24860 (33308) | 33308..34045 | + | 738 | WP_000199901.1 | hypothetical protein | - |
| K8B73_RS24865 (34096) | 34096..36339 | + | 2244 | WP_021527988.1 | type IV conjugative transfer system coupling protein TraD | - |
| K8B73_RS24870 (36339) | 36339..41608 | + | 5270 | Protein_49 | conjugative transfer relaxase/helicase TraI | - |
| K8B73_RS24875 (41628) | 41628..42374 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| K8B73_RS24880 (42433) | 42433..43292 | + | 860 | Protein_51 | alpha/beta hydrolase | - |
| K8B73_RS24885 (43395) | 43395..43955 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| K8B73_RS24890 (44084) | 44084..44296 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| K8B73_RS24895 (44541) | 44541..45002 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| K8B73_RS24900 (45048) | 45048..45257 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| K8B73_RS24905 (45295) | 45295..45885 | + | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| K8B73_RS24910 (46125) | 46125..46385 | + | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| K8B73_RS24915 (46618) | 46618..46692 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| K8B73_RS24920 (46685) | 46685..47542 | + | 858 | WP_000131001.1 | incFII family plasmid replication initiator RepA | - |
| K8B73_RS24925 (48242) | 48242..48382 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| K8B73_RS24930 (48480) | 48480..49133 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| K8B73_RS24935 (49226) | 49226..49483 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| K8B73_RS24940 (49416) | 49416..49817 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| K8B73_RS24945 (50066) | 50066..50763 | + | 698 | WP_224181008.1 | IS1-like element IS1A family transposase | - |
| K8B73_RS24950 (50870) | 50870..51304 | - | 435 | WP_000429836.1 | Hg(II)-responsive transcriptional regulator | - |
| K8B73_RS24955 (51376) | 51376..51726 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| K8B73_RS24960 (51740) | 51740..52015 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| K8B73_RS24965 (52051) | 52051..52473 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| K8B73_RS24970 (52525) | 52525..54219 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| K8B73_RS24975 (54237) | 54237..54434 | + | 198 | Protein_70 | mercuric resistance transcriptional repressor protein MerD | - |
| K8B73_RS24980 (54491) | 54491..55195 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| K8B73_RS24985 (55337) | 55337..56350 | - | 1014 | WP_000845046.1 | class 1 integron integrase IntI1 | - |
| K8B73_RS24990 (56508) | 56508..56980 | + | 473 | Protein_73 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| K8B73_RS24995 (57111) | 57111..57899 | + | 789 | WP_000503573.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 | - |
| K8B73_RS25000 (58105) | 58105..58452 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| K8B73_RS25005 (58446) | 58446..59285 | + | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| K8B73_RS25010 (59413) | 59413..59616 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| K8B73_RS25015 (59772) | 59772..60977 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| K8B73_RS25020 (60988) | 60988..61056 | + | 69 | Protein_79 | PadR family transcriptional regulator | - |
| K8B73_RS25025 (61110) | 61110..61814 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| K8B73_RS25030 (61934) | 61934..62794 | + | 861 | WP_000027057.1 | broad-spectrum class A beta-lactamase TEM-1 | - |
| K8B73_RS25035 (62941) | 62941..63222 | + | 282 | Protein_82 | transposase zinc-binding domain-containing protein | - |
| K8B73_RS25040 (63392) | 63392..64096 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| K8B73_RS25050 (65066) | 65066..65725 | + | 660 | WP_000412211.1 | type A-1 chloramphenicol O-acetyltransferase | - |
| K8B73_RS25055 (65879) | 65879..66576 | + | 698 | WP_225933817.1 | IS1-like element IS1B family transposase | - |
| K8B73_RS25060 (66573) | 66573..66836 | + | 264 | WP_049802299.1 | antibiotic biosynthesis monooxygenase | - |
| K8B73_RS25065 (66829) | 66829..67080 | + | 252 | Protein_88 | amino acid-binding protein | - |
| K8B73_RS25070 (67134) | 67134..67838 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| K8B73_RS25075 (67903) | 67903..68166 | + | 264 | Protein_90 | transposase | - |
| K8B73_RS25080 (68659) | 68659..69243 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| K8B73_RS25085 (69243) | 69243..70481 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| K8B73_RS25090 (70478) | 70478..71383 | - | 906 | WP_000219391.1 | Mph(A) family macrolide 2'-phosphotransferase | - |
| K8B73_RS25095 (71505) | 71505..72209 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| K8B73_RS25100 (72308) | 72308..72931 | + | 624 | WP_001280391.1 | winged helix-turn-helix domain-containing protein | - |
| K8B73_RS25105 (72909) | 72909..73532 | - | 624 | WP_000088605.1 | tetracycline resistance transcriptional repressor TetR(B) | - |
| K8B73_RS25110 (73614) | 73614..74819 | + | 1206 | WP_001089068.1 | tetracycline efflux MFS transporter Tet(B) | - |
| K8B73_RS25115 (74932) | 74932..75525 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| K8B73_RS25125 (76525) | 76525..76638 | + | 114 | Protein_100 | IS6 family transposase | - |
| K8B73_RS25130 (76776) | 76776..76946 | + | 171 | Protein_101 | DsbA family protein | - |
| K8B73_RS25135 (76936) | 76936..77442 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| K8B73_RS25140 (77679) | 77679..78440 | + | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| K8B73_RS25145 (78787) | 78787..80673 | + | 1887 | WP_000118029.1 | FTR1 family protein | - |
| K8B73_RS25150 (80714) | 80714..81241 | + | 528 | WP_000178050.1 | iron transporter | - |
| K8B73_RS25155 (81345) | 81345..82724 | + | 1380 | WP_180818586.1 | Fe-S-containing protein | - |
| K8B73_RS25160 (82727) | 82727..84010 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| K8B73_RS25165 (84000) | 84000..85130 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| K8B73_RS25170 (85135) | 85135..85830 | + | 696 | WP_000117262.1 | ABC transporter ATP-binding protein | - |
| K8B73_RS25175 (85817) | 85817..86302 | + | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| K8B73_RS25180 (86327) | 86327..86812 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| K8B73_RS25185 (86934) | 86934..87567 | + | 634 | Protein_112 | histidine-type phosphatase | - |
| K8B73_RS25190 (87716) | 87716..87889 | - | 174 | Protein_113 | IS5/IS1182 family transposase | - |
| K8B73_RS26580 (87890) | 87890..88204 | - | 315 | Protein_114 | hypothetical protein | - |
| K8B73_RS25200 (88877) | 88877..89615 | - | 739 | Protein_115 | IS3 family transposase | - |
| K8B73_RS25205 (89641) | 89641..89946 | + | 306 | Protein_116 | IS91 family transposase | - |
| K8B73_RS25210 (90469) | 90469..91644 | - | 1176 | WP_001020413.1 | enterotoxin production-related protein TieB | - |
| K8B73_RS25215 (91713) | 91713..93974 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| K8B73_RS25220 (94143) | 94143..94919 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| K8B73_RS25225 (94927) | 94927..95802 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| K8B73_RS25230 (96176) | 96176..96801 | - | 626 | Protein_121 | replication initiation protein | - |
| K8B73_RS25235 (98253) | 98253..98588 | - | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| K8B73_RS25240 (98717) | 98717..99064 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| K8B73_RS25245 (99084) | 99084..99593 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| K8B73_RS25250 (99590) | 99590..99850 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| K8B73_RS25255 (99952) | 99952..100691 | + | 740 | Protein_126 | IS3 family transposase | - |
| K8B73_RS25260 (101364) | 101364..102872 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| K8B73_RS25265 (102956) | 102956..103294 | + | 339 | Protein_128 | DDE-type integrase/transposase/recombinase | - |
| K8B73_RS25270 (103374) | 103374..103778 | + | 405 | WP_000839179.1 | transposase | - |
| K8B73_RS25275 (103775) | 103775..104122 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| K8B73_RS25280 (104171) | 104171..105116 | + | 946 | Protein_131 | IS66 family transposase | - |
| K8B73_RS25285 (105202) | 105202..106224 | + | 1023 | WP_001310017.1 | IS21-like element IS100 family transposase | - |
| K8B73_RS25290 (106221) | 106221..107003 | + | 783 | WP_001300609.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| K8B73_RS25295 (107071) | 107071..107679 | + | 609 | Protein_134 | IS66 family transposase | - |
| K8B73_RS25300 (107742) | 107742..108532 | - | 791 | Protein_135 | DUF4198 domain-containing protein | - |
| K8B73_RS25305 (108539) | 108539..110509 | - | 1971 | WP_001298664.1 | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor | - |
| K8B73_RS25310 (110791) | 110791..111230 | + | 440 | Protein_137 | transposase | - |
| K8B73_RS25315 (111752) | 111752..112024 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| K8B73_RS25320 (112470) | 112470..112645 | + | 176 | Protein_139 | IS3 family transposase | - |
| K8B73_RS25325 (112871) | 112871..114040 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| K8B73_RS25330 (114407) | 114407..114595 | + | 189 | WP_001309252.1 | hypothetical protein | - |
| K8B73_RS25335 (114716) | 114716..115456 | + | 741 | WP_001066952.1 | tyrosine-type recombinase/integrase | - |
| K8B73_RS25340 (115699) | 115699..116676 | - | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| K8B73_RS25345 (117851) | 117851..118492 | - | 642 | WP_223107155.1 | hypothetical protein | - |
| K8B73_RS25350 (120814) | 120814..121032 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| K8B73_RS25355 (121034) | 121034..121339 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| K8B73_RS25360 (121340) | 121340..122149 | + | 810 | WP_000016979.1 | site-specific integrase | - |
| K8B73_RS25365 (122287) | 122287..122562 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| K8B73_RS25370 (122556) | 122556..123200 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| K8B73_RS25375 (123429) | 123429..124399 | + | 971 | Protein_150 | plasmid segregation protein ParM | - |
| K8B73_RS25380 (124404) | 124404..124796 | + | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| K8B73_RS25385 (124801) | 124801..125052 | - | 252 | Protein_152 | DUF4113 domain-containing protein | - |
| K8B73_RS25390 (125114) | 125114..125911 | - | 798 | WP_001703540.1 | IS21-like element IS21 family helper ATPase IstB | - |
| K8B73_RS25395 (125911) | 125911..127083 | - | 1173 | WP_000952373.1 | IS21-like element IS21 family transposase | - |
| K8B73_RS25400 (127185) | 127185..128206 | - | 1022 | Protein_155 | translesion error-prone DNA polymerase V subunit UmuC | - |
| K8B73_RS25405 (128206) | 128206..128643 | - | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| K8B73_RS25410 (128640) | 128640..128888 | - | 249 | WP_000619112.1 | DinI-like family protein | - |
| K8B73_RS25415 (129023) | 129023..129541 | + | 519 | WP_000115885.1 | ClbS/DfsB family four-helix bundle protein | - |
| K8B73_RS25420 (129560) | 129560..130780 | + | 1221 | WP_000343766.1 | ISL3-like element ISEc53 family transposase | - |
| K8B73_RS25425 (131199) | 131199..132101 | + | 903 | WP_001310012.1 | DUF1281 domain-containing protein | - |
| K8B73_RS25430 (132098) | 132098..132409 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| K8B73_RS25435 (132485) | 132485..133168 | + | 684 | WP_000086169.1 | DNA methylase | - |
| K8B73_RS25440 (133169) | 133169..133390 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| K8B73_RS25445 (133320) | 133320..133838 | + | 519 | WP_223364201.1 | DUF1380 family protein | - |
| K8B73_RS25450 (133883) | 133883..134654 | + | 772 | Protein_165 | hypothetical protein | - |
| K8B73_RS25455 (135070) | 135070..135495 | + | 426 | WP_001198903.1 | antirestriction protein | - |
| K8B73_RS25460 (135542) | 135542..135964 | + | 423 | WP_000271708.1 | DUF1380 family protein | - |
| K8B73_RS25465 (135961) | 135961..136152 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| K8B73_RS25475 (137115) | 137115..137345 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| K8B73_RS25480 (137397) | 137397..138758 | + | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|