MGE detailed information
MGE type: Genomic_island MGE length: 56225 bp
Accession: NZ_CP082824 Location: 4557142..4613366 Organism: Escherichia coli strain SCAID URN1-2021 (19/278) Replicon: chromosome
Accession: NZ_CP082824 Location: 4557142..4613366 Organism: Escherichia coli strain SCAID URN1-2021 (19/278) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8B79_RS22295 (4552581) | 4552581..4553274 | + | 694 | Protein_4396 | IS1 family transposase | - |
| K8B79_RS22300 (4553892) | 4553892..4554236 | + | 345 | Protein_4397 | alcohol dehydrogenase catalytic domain-containing protein | - |
| K8B79_RS22305 (4554309) | 4554309..4555465 | + | 1157 | WP_100183773.1 | IS3 family transposase | - |
| K8B79_RS22310 (4555486) | 4555486..4555671 | + | 186 | Protein_4399 | transposase domain-containing protein | - |
| K8B79_RS22315 (4555806) | 4555806..4557134 | + | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| K8B79_RS22320 (4557142) | 4557142..4557717 | + | 576 | WP_001774140.1 | SLATT domain-containing protein | - |
| K8B79_RS22325 (4558270) | 4558270..4558995 | - | 726 | WP_000020778.1 | TatD family hydrolase | - |
| K8B79_RS22330 (4558992) | 4558992..4560296 | - | 1305 | WP_000192872.1 | hypothetical protein | - |
| K8B79_RS22335 (4560293) | 4560293..4561045 | - | 753 | WP_000537317.1 | hypothetical protein | - |
| K8B79_RS22340 (4561045) | 4561045..4562829 | - | 1785 | WP_000269403.1 | P-loop NTPase fold protein | - |
| K8B79_RS22345 (4562961) | 4562961..4564316 | - | 1356 | WP_223091998.1 | hypothetical protein | - |
| K8B79_RS22350 (4564555) | 4564555..4565031 | - | 477 | Protein_4407 | hypothetical protein | - |
| K8B79_RS22355 (4565031) | 4565031..4565375 | - | 345 | Protein_4408 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| K8B79_RS22360 (4566055) | 4566055..4566246 | + | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| K8B79_RS22365 (4566299) | 4566299..4566532 | - | 234 | WP_000124176.1 | hypothetical protein | - |
| K8B79_RS22370 (4566628) | 4566628..4567127 | - | 500 | Protein_4411 | DNA-binding protein | - |
| K8B79_RS22375 (4567478) | 4567478..4568596 | + | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| K8B79_RS22380 (4568736) | 4568736..4569422 | + | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| K8B79_RS22385 (4569477) | 4569477..4570235 | + | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| K8B79_RS22390 (4570219) | 4570219..4570944 | + | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| K8B79_RS22395 (4570956) | 4570956..4571225 | + | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| K8B79_RS22400 (4571253) | 4571253..4571750 | + | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| K8B79_RS22405 (4571779) | 4571779..4572975 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| K8B79_RS22410 (4573260) | 4573260..4573541 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| K8B79_RS22415 (4573563) | 4573563..4574348 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| K8B79_RS22420 (4574409) | 4574409..4575926 | + | 1518 | WP_001773853.1 | Aldehyde-alcohol dehydrogenase | VF |
| K8B79_RS22425 (4575950) | 4575950..4576249 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| K8B79_RS22430 (4576260) | 4576260..4576835 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| K8B79_RS22435 (4576884) | 4576884..4579436 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| K8B79_RS22440 (4579545) | 4579545..4580462 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| K8B79_RS22445 (4580599) | 4580599..4581504 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| K8B79_RS22450 (4581990) | 4581990..4582529 | + | 540 | WP_001332064.1 | maturase | - |
| K8B79_RS22455 (4582596) | 4582596..4583078 | + | 483 | WP_001362989.1 | reverse transcriptase domain-containing protein | - |
| K8B79_RS22460 (4583628) | 4583628..4584890 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| K8B79_RS22465 (4584907) | 4584907..4585962 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator Btr | VF |
| K8B79_RS22470 (4586091) | 4586091..4587242 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| K8B79_RS22475 (4587287) | 4587287..4587832 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| K8B79_RS22480 (4588189) | 4588189..4588533 | - | 345 | WP_001773854.1 | Transposon Tn10 TetD protein | VF |
| K8B79_RS26585 (4588784) | 4588784..4589176 | - | 393 | WP_224156610.1 | TetR family transcriptional regulator | - |
| K8B79_RS22490 (4589276) | 4589276..4590424 | - | 1149 | Protein_4435 | Multidrug resistance protein MexB | VF |
| K8B79_RS22495 (4590524) | 4590524..4590784 | + | 261 | Protein_4436 | IS3 family transposase IS2 | Transposase |
| K8B79_RS26590 (4590776) | 4590776..4590838 | - | 63 | Protein_4437 | IS3 family transposase IS2 | Transposase |
| K8B79_RS26710 (4590967) | 4590967..4591092 | - | 126 | WP_000831909.1 | hypothetical protein | - |
| K8B79_RS22505 (4591089) | 4591089..4591322 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| K8B79_RS22510 (4591391) | 4591391..4591966 | - | 576 | WP_000991593.1 | hypothetical protein | - |
| K8B79_RS22515 (4592313) | 4592313..4593044 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| K8B79_RS22520 (4594497) | 4594497..4595720 | - | 1224 | WP_001773856.1 | hypothetical protein | - |
| K8B79_RS22525 (4595821) | 4595821..4596704 | + | 884 | Protein_4443 | 50S ribosome-binding GTPase | - |
| K8B79_RS22530 (4596907) | 4596907..4597587 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| K8B79_RS22535 (4597735) | 4597735..4598412 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| K8B79_RS22540 (4598418) | 4598418..4598651 | + | 234 | WP_001278283.1 | DUF905 family protein | - |
| K8B79_RS22545 (4598741) | 4598741..4599559 | + | 819 | WP_001773857.1 | DUF932 domain-containing protein | - |
| K8B79_RS22550 (4599650) | 4599650..4600135 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| K8B79_RS22555 (4600151) | 4600151..4600627 | + | 477 | WP_001186786.1 | RadC family protein | - |
| K8B79_RS22560 (4600690) | 4600690..4600911 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| K8B79_RS22565 (4601074) | 4601074..4601442 | + | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| K8B79_RS22570 (4601532) | 4601532..4601906 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| K8B79_RS22575 (4601903) | 4601903..4602391 | + | 489 | WP_000777545.1 | DUF5983 family protein | - |
| K8B79_RS22580 (4602403) | 4602403..4602600 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| K8B79_RS22585 (4602697) | 4602697..4603266 | + | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| K8B79_RS22590 (4604015) | 4604015..4605553 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| K8B79_RS22595 (4605919) | 4605919..4607253 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| K8B79_RS22600 (4607333) | 4607333..4609480 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| K8B79_RS22605 (4609539) | 4609539..4610996 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| K8B79_RS22610 (4611233) | 4611233..4612750 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| K8B79_RS22615 (4612869) | 4612869..4613042 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| K8B79_RS22620 (4613070) | 4613070..4613366 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| K8B79_RS22625 (4613595) | 4613595..4613867 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| K8B79_RS22630 (4613879) | 4613879..4614109 | - | 231 | WP_000373293.1 | 4Fe-4S mono-cluster protein YjdI | - |
| K8B79_RS22635 (4614290) | 4614290..4615921 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| K8B79_RS22640 (4615918) | 4615918..4616637 | + | 720 | WP_001540474.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|