MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP082824 Location: 4332022..4351274 Organism: Escherichia coli strain SCAID URN1-2021 (19/278) Replicon: chromosome
Accession: NZ_CP082824 Location: 4332022..4351274 Organism: Escherichia coli strain SCAID URN1-2021 (19/278) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8B79_RS21175 (4327501) | 4327501..4328004 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| K8B79_RS21180 (4328017) | 4328017..4328547 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| K8B79_RS21185 (4328557) | 4328557..4331193 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| K8B79_RS21190 (4331260) | 4331260..4331985 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| K8B79_RS21195 (4332022) | 4332022..4332561 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| K8B79_RS21200 (4332626) | 4332626..4333174 | - | 549 | WP_001774144.1 | Type-1 fimbrial protein, A chain | VF |
| K8B79_RS21205 (4333656) | 4333656..4334252 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| K8B79_RS21210 (4334730) | 4334730..4335332 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| K8B79_RS21215 (4336788) | 4336788..4337504 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| K8B79_RS21220 (4337524) | 4337524..4338630 | + | 1107 | WP_001774143.1 | N-acetylneuraminate epimerase | - |
| K8B79_RS21225 (4338695) | 4338695..4339675 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| K8B79_RS26570 (4339785) | 4339785..4339990 | + | 206 | Protein_4186 | HNH endonuclease | - |
| K8B79_RS21230 (4340258) | 4340258..4341498 | - | 1241 | Protein_4187 | helicase YjhR | - |
| K8B79_RS26575 (4341614) | 4341614..4341745 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| K8B79_RS21240 (4342236) | 4342236..4342493 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| K8B79_RS21245 (4342505) | 4342505..4343050 | + | 546 | WP_001540600.1 | N-acetyltransferase | Antitoxin Detail |
| K8B79_RS21250 (4343106) | 4343106..4343852 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| K8B79_RS21255 (4344021) | 4344021..4344239 | + | 219 | Protein_4192 | hypothetical protein | - |
| K8B79_RS21260 (4344277) | 4344277..4344393 | + | 117 | Protein_4193 | VOC family protein | - |
| K8B79_RS21265 (4344638) | 4344638..4345759 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| K8B79_RS21270 (4345756) | 4345756..4346034 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| K8B79_RS21275 (4346046) | 4346046..4347359 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| K8B79_RS21280 (4347372) | 4347372..4348178 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| K8B79_RS21285 (4348309) | 4348309..4348740 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| K8B79_RS21290 (4348752) | 4348752..4349384 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| K8B79_RS21295 (4349401) | 4349401..4350183 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| K8B79_RS21300 (4350486) | 4350486..4351274 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| K8B79_RS21305 (4351279) | 4351279..4352184 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| K8B79_RS21310 (4352195) | 4352195..4354162 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| K8B79_RS21315 (4354269) | 4354269..4355618 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|