MGE detailed information
MGE type: Genomic_island MGE length: 16025 bp
Accession: NZ_CP082824 Location: 4289367..4305391 Organism: Escherichia coli strain SCAID URN1-2021 (19/278) Replicon: chromosome
Accession: NZ_CP082824 Location: 4289367..4305391 Organism: Escherichia coli strain SCAID URN1-2021 (19/278) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8B79_RS20985 (4284788) | 4284788..4285810 | - | 1023 | WP_000106007.1 | zinc-binding alcohol dehydrogenase family protein | - |
| K8B79_RS20990 (4285949) | 4285949..4286854 | + | 906 | WP_000091596.1 | GntR family transcriptional regulator | - |
| K8B79_RS20995 (4287025) | 4287025..4288676 | - | 1652 | Protein_4139 | Na+/H+ antiporter | - |
| K8B79_RS21000 (4289367) | 4289367..4290338 | + | 972 | WP_001774149.1 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
| K8B79_RS21005 (4290402) | 4290402..4290875 | + | 474 | WP_001235681.1 | TRAP transporter small permease | - |
| K8B79_RS21010 (4290872) | 4290872..4292143 | + | 1272 | WP_000118640.1 | TRAP transporter large permease | - |
| K8B79_RS21015 (4292186) | 4292186..4293850 | - | 1665 | WP_001774148.1 | Methyl-accepting chemotaxis protein I | VF |
| K8B79_RS21020 (4294227) | 4294227..4296377 | + | 2151 | WP_001314407.1 | pyruvate/proton symporter BtsT | - |
| K8B79_RS21025 (4296495) | 4296495..4296698 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| K8B79_RS21030 (4296709) | 4296709..4297665 | + | 957 | WP_001297640.1 | GTPase | - |
| K8B79_RS21035 (4297751) | 4297751..4297942 | - | 192 | WP_001513538.1 | hypothetical protein | - |
| K8B79_RS21040 (4297983) | 4297983..4298951 | - | 969 | WP_001513537.1 | hypothetical protein | - |
| K8B79_RS21045 (4299092) | 4299092..4301524 | + | 2433 | WP_001513536.1 | DEAD/DEAH box helicase family protein | - |
| K8B79_RS21050 (4301591) | 4301591..4303060 | + | 1470 | WP_001387312.1 | type I restriction-modification system subunit M | - |
| K8B79_RS21055 (4303060) | 4303060..4304829 | + | 1770 | WP_001513535.1 | restriction endonuclease subunit S | - |
| - (4304979) | 4304979..4305055 | - | 77 | NuclAT_8 | - | Antitoxin Detail |
| - (4304979) | 4304979..4305055 | - | 77 | NuclAT_8 | - | Antitoxin Detail |
| - (4304979) | 4304979..4305055 | - | 77 | NuclAT_8 | - | Antitoxin Detail |
| - (4304979) | 4304979..4305055 | - | 77 | NuclAT_8 | - | Antitoxin Detail |
| - (4304979) | 4304979..4305055 | - | 77 | NuclAT_9 | - | Antitoxin Detail |
| - (4304979) | 4304979..4305055 | - | 77 | NuclAT_9 | - | Antitoxin Detail |
| - (4304979) | 4304979..4305055 | - | 77 | NuclAT_9 | - | Antitoxin Detail |
| - (4304979) | 4304979..4305055 | - | 77 | NuclAT_9 | - | Antitoxin Detail |
| K8B79_RS21060 (4305050) | 4305050..4305391 | + | 342 | WP_000132614.1 | endoribonuclease SymE | Toxin Detail |
| K8B79_RS26560 (4305438) | 4305438..4306601 | - | 1164 | WP_224153787.1 | DUF1524 domain-containing protein | - |
| K8B79_RS26565 (4306655) | 4306655..4307531 | - | 877 | Protein_4154 | DUF262 domain-containing protein | - |
| K8B79_RS21075 (4307937) | 4307937..4308857 | - | 921 | WP_001513532.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| K8B79_RS21080 (4309042) | 4309042..4310322 | + | 1281 | WP_001338077.1 | DUF445 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|