MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 118592 bp
Accession: NZ_CP082821 Location: 5707670..5826261 Organism: Pseudomonas aeruginosa strain SCAID PLC1-2021 (16/222) Replicon: chromosome
Accession: NZ_CP082821 Location: 5707670..5826261 Organism: Pseudomonas aeruginosa strain SCAID PLC1-2021 (16/222) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8B72_RS27490 (K8B72_27490) | 5706445..5707305 | + | 861 | WP_023094840.1 | ParA family protein | - |
| K8B72_RS27495 (K8B72_27495) | 5707307..5708044 | + | 738 | WP_003134063.1 | hypothetical protein | - |
| K8B72_RS27500 (K8B72_27500) | 5708041..5708538 | + | 498 | WP_003134065.1 | hypothetical protein | - |
| K8B72_RS27505 (K8B72_27505) | 5708535..5709365 | + | 831 | WP_003134067.1 | hypothetical protein | - |
| K8B72_RS27510 (K8B72_27510) | 5709362..5710048 | + | 687 | WP_003134069.1 | hypothetical protein | - |
| K8B72_RS27515 (K8B72_27515) | 5710048..5710749 | + | 702 | WP_003134071.1 | DUF2786 domain-containing protein | - |
| K8B72_RS27520 (K8B72_27520) | 5710746..5711453 | + | 708 | WP_003134072.1 | HNH endonuclease signature motif containing protein | - |
| K8B72_RS27525 (K8B72_27525) | 5711437..5711661 | + | 225 | WP_003134074.1 | hypothetical protein | - |
| K8B72_RS27530 (K8B72_27530) | 5711658..5713004 | + | 1347 | WP_003134077.1 | replicative DNA helicase | - |
| K8B72_RS27535 (K8B72_27535) | 5713001..5713186 | + | 186 | WP_003157042.1 | hypothetical protein | - |
| K8B72_RS27540 (K8B72_27540) | 5713176..5713703 | + | 528 | WP_003134079.1 | hypothetical protein | - |
| K8B72_RS27545 (K8B72_27545) | 5713700..5713957 | + | 258 | WP_003134081.1 | hypothetical protein | - |
| K8B72_RS27550 (K8B72_27550) | 5713950..5714444 | + | 495 | WP_003134082.1 | hypothetical protein | - |
| K8B72_RS27555 (K8B72_27555) | 5714437..5714670 | + | 234 | WP_003134084.1 | hypothetical protein | - |
| K8B72_RS27560 (K8B72_27560) | 5714670..5715686 | + | 1017 | WP_023094841.1 | nucleoid-associated protein YejK | - |
| K8B72_RS27565 (K8B72_27565) | 5715689..5715937 | + | 249 | WP_016254076.1 | Arc family DNA-binding protein | - |
| K8B72_RS27570 (K8B72_27570) | 5715934..5717670 | + | 1737 | WP_031690666.1 | ParB family protein | - |
| K8B72_RS27575 (K8B72_27575) | 5717698..5718465 | + | 768 | WP_003134101.1 | DUF2857 domain-containing protein | - |
| K8B72_RS27580 (K8B72_27580) | 5718462..5719787 | + | 1326 | WP_003134103.1 | STY4528 family pathogenicity island replication protein | - |
| K8B72_RS27585 (K8B72_27585) | 5719899..5720312 | - | 414 | WP_153570846.1 | hypothetical protein | - |
| K8B72_RS27590 (K8B72_27590) | 5720323..5720463 | + | 141 | WP_153549538.1 | hypothetical protein | - |
| K8B72_RS27595 (K8B72_27595) | 5720620..5721348 | + | 729 | WP_023094843.1 | TIGR03761 family integrating conjugative element protein | - |
| K8B72_RS27600 (K8B72_27600) | 5721354..5721887 | + | 534 | WP_003134105.1 | DUF3158 family protein | - |
| K8B72_RS27605 (K8B72_27605) | 5721901..5722389 | + | 489 | WP_003134107.1 | single-stranded DNA-binding protein | - |
| K8B72_RS27610 (K8B72_27610) | 5722493..5722687 | + | 195 | WP_031632157.1 | hypothetical protein | - |
| K8B72_RS27615 (K8B72_27615) | 5722939..5723106 | + | 168 | Protein_5469 | CrpP family protein | - |
| K8B72_RS27620 (K8B72_27620) | 5723172..5723390 | - | 219 | WP_023094844.1 | hypothetical protein | - |
| K8B72_RS27625 (K8B72_27625) | 5723407..5723601 | - | 195 | WP_023094845.1 | hypothetical protein | - |
| K8B72_RS27630 (K8B72_27630) | 5723617..5724027 | - | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| K8B72_RS27635 (K8B72_27635) | 5724027..5724257 | - | 231 | WP_031634724.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| K8B72_RS27640 (K8B72_27640) | 5724575..5726494 | + | 1920 | WP_003134111.1 | type I DNA topoisomerase | - |
| K8B72_RS27645 (K8B72_27645) | 5726676..5727254 | + | 579 | WP_023094847.1 | hypothetical protein | - |
| K8B72_RS27650 (K8B72_27650) | 5727371..5727976 | - | 606 | WP_023094848.1 | LysE family translocator | - |
| K8B72_RS27655 (K8B72_27655) | 5728098..5728967 | + | 870 | WP_023094849.1 | LysR family transcriptional regulator | - |
| K8B72_RS27660 (K8B72_27660) | 5729405..5731300 | + | 1896 | WP_176603688.1 | hypothetical protein | - |
| K8B72_RS27665 (K8B72_27665) | 5731297..5733270 | + | 1974 | WP_003134119.1 | DEAD/DEAH box helicase | - |
| K8B72_RS27670 (K8B72_27670) | 5733358..5734470 | + | 1113 | WP_023094851.1 | TcpQ domain-containing protein | - |
| K8B72_RS27675 (K8B72_27675) | 5734470..5736179 | + | 1710 | WP_003134120.1 | PilN family type IVB pilus formation outer membrane protein | - |
| K8B72_RS27680 (K8B72_27680) | 5736183..5737508 | + | 1326 | WP_003134121.1 | type 4b pilus protein PilO2 | - |
| K8B72_RS27685 (K8B72_27685) | 5737498..5738031 | + | 534 | WP_003134123.1 | type IV pilus biogenesis protein PilP | - |
| K8B72_RS27690 (K8B72_27690) | 5738040..5739620 | + | 1581 | WP_003134124.1 | ATPase, T2SS/T4P/T4SS family | - |
| K8B72_RS27695 (K8B72_27695) | 5739620..5740699 | + | 1080 | WP_003109360.1 | type II secretion system F family protein | - |
| K8B72_RS27700 (K8B72_27700) | 5740721..5741251 | + | 531 | WP_003099765.1 | type 4 pilus major pilin | - |
| K8B72_RS27705 (K8B72_27705) | 5741248..5742189 | + | 942 | WP_003134125.1 | ATPase, T2SS/T4P/T4SS family | - |
| K8B72_RS27710 (K8B72_27710) | 5742194..5743522 | + | 1329 | WP_003134127.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| K8B72_RS27715 (K8B72_27715) | 5743551..5743988 | + | 438 | WP_003134129.1 | type IV pilus biogenesis protein PilM | - |
| K8B72_RS27720 (K8B72_27720) | 5744795..5745634 | - | 840 | WP_023094852.1 | hypothetical protein | - |
| K8B72_RS27725 (K8B72_27725) | 5745761..5746939 | + | 1179 | WP_023094853.1 | hypothetical protein | - |
| K8B72_RS27730 (K8B72_27730) | 5746936..5749200 | + | 2265 | WP_003134145.1 | Mov34/MPN/PAD-1 family protein | - |
| K8B72_RS27735 (K8B72_27735) | 5749286..5750371 | + | 1086 | WP_023094854.1 | MBL fold metallo-hydrolase | - |
| K8B72_RS27740 (K8B72_27740) | 5750368..5751195 | + | 828 | WP_023094855.1 | hypothetical protein | - |
| K8B72_RS27745 (K8B72_27745) | 5751589..5751978 | + | 390 | WP_016264238.1 | hypothetical protein | - |
| K8B72_RS27750 (K8B72_27750) | 5752051..5752230 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| K8B72_RS34475 | 5752232..5752366 | + | 135 | WP_003109366.1 | hypothetical protein | - |
| K8B72_RS27755 (K8B72_27755) | 5752690..5753178 | + | 489 | WP_023094856.1 | STY4534 family ICE replication protein | - |
| K8B72_RS27760 (K8B72_27760) | 5753316..5753474 | + | 159 | WP_003134147.1 | hypothetical protein | - |
| K8B72_RS27765 (K8B72_27765) | 5753548..5753745 | + | 198 | WP_023094857.1 | hypothetical protein | - |
| K8B72_RS27770 (K8B72_27770) | 5754230..5754937 | + | 708 | WP_003134149.1 | hypothetical protein | - |
| K8B72_RS27775 (K8B72_27775) | 5755173..5755523 | + | 351 | WP_003134150.1 | hypothetical protein | - |
| K8B72_RS27780 (K8B72_27780) | 5755580..5756212 | + | 633 | WP_003134151.1 | DUF3275 family protein | - |
| K8B72_RS27785 (K8B72_27785) | 5756209..5756484 | + | 276 | WP_003117060.1 | hypothetical protein | - |
| K8B72_RS27790 (K8B72_27790) | 5756554..5756916 | + | 363 | WP_003134152.1 | hypothetical protein | - |
| K8B72_RS27795 (K8B72_27795) | 5756984..5757238 | + | 255 | WP_003134153.1 | hypothetical protein | - |
| K8B72_RS27800 (K8B72_27800) | 5757330..5757935 | + | 606 | WP_003134154.1 | hypothetical protein | - |
| K8B72_RS27805 (K8B72_27805) | 5757965..5759410 | + | 1446 | WP_003134155.1 | DUF6094 domain-containing protein | - |
| K8B72_RS27810 (K8B72_27810) | 5759515..5761764 | + | 2250 | WP_003134156.1 | DEAD/DEAH box helicase | - |
| K8B72_RS27815 (K8B72_27815) | 5761873..5762094 | - | 222 | WP_049874674.1 | hypothetical protein | - |
| K8B72_RS27820 (K8B72_27820) | 5762583..5763818 | - | 1236 | WP_031690673.1 | helix-turn-helix domain-containing protein | - |
| K8B72_RS27825 (K8B72_27825) | 5764074..5764343 | + | 270 | WP_023094860.1 | YtcA family lipoprotein | - |
| K8B72_RS27830 (K8B72_27830) | 5764356..5765435 | + | 1080 | WP_023094861.1 | multidrug transporter subunit MdtN | - |
| K8B72_RS27835 (K8B72_27835) | 5765419..5767455 | + | 2037 | WP_003086207.1 | FUSC family protein | - |
| K8B72_RS34355 | 5767674..5767821 | + | 148 | Protein_5515 | IS3 family transposase | - |
| K8B72_RS27840 (K8B72_27840) | 5767871..5768470 | + | 600 | WP_003086204.1 | substrate binding domain-containing protein | - |
| K8B72_RS34360 | 5768606..5768692 | + | 87 | Protein_5517 | hypothetical protein | - |
| K8B72_RS27845 (K8B72_27845) | 5768706..5769158 | + | 453 | WP_014603646.1 | halogenase | - |
| K8B72_RS27850 (K8B72_27850) | 5769487..5770377 | - | 891 | WP_003086197.1 | LysR family transcriptional regulator | - |
| K8B72_RS27855 (K8B72_27855) | 5770775..5772295 | - | 1521 | WP_031690674.1 | MFS transporter | - |
| K8B72_RS27860 (K8B72_27860) | 5772311..5773519 | - | 1209 | WP_223106312.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| K8B72_RS27865 (K8B72_27865) | 5773509..5774942 | - | 1434 | WP_225525655.1 | efflux transporter outer membrane subunit | - |
| K8B72_RS27870 (K8B72_27870) | 5775157..5775741 | - | 585 | WP_031632454.1 | isochorismatase family protein | - |
| K8B72_RS27875 (K8B72_27875) | 5775843..5776577 | - | 735 | WP_071535248.1 | pirin family protein | - |
| K8B72_RS27880 (K8B72_27880) | 5776951..5777562 | - | 612 | WP_023094864.1 | glutathione S-transferase family protein | - |
| K8B72_RS27885 (K8B72_27885) | 5777593..5778450 | + | 858 | WP_003086189.1 | alpha/beta hydrolase | - |
| K8B72_RS27890 (K8B72_27890) | 5778833..5780281 | - | 1449 | WP_003134163.1 | catalase KatA | - |
| K8B72_RS34365 | 5780682..5781734 | + | 1053 | Protein_5528 | IS5 family transposase | - |
| K8B72_RS27905 (K8B72_27905) | 5781863..5782543 | + | 681 | WP_003134165.1 | hypothetical protein | - |
| K8B72_RS27910 (K8B72_27910) | 5782554..5783309 | + | 756 | WP_003134166.1 | TIGR03759 family integrating conjugative element protein | - |
| K8B72_RS27915 (K8B72_27915) | 5783294..5783875 | + | 582 | WP_003134167.1 | hypothetical protein | - |
| K8B72_RS27920 (K8B72_27920) | 5783872..5784372 | + | 501 | WP_003134168.1 | integrating conjugative element protein | - |
| K8B72_RS27925 (K8B72_27925) | 5784381..5784650 | + | 270 | WP_003134169.1 | hypothetical protein | - |
| K8B72_RS27930 (K8B72_27930) | 5784655..5786886 | + | 2232 | WP_003134171.1 | type IV conjugative transfer system coupling protein TraD | - |
| K8B72_RS27935 (K8B72_27935) | 5786886..5787632 | + | 747 | WP_223106313.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| K8B72_RS27940 (K8B72_27940) | 5787643..5789124 | + | 1482 | WP_003134175.1 | UvrD-helicase domain-containing protein | - |
| K8B72_RS27945 (K8B72_27945) | 5789255..5790364 | + | 1110 | WP_003134177.1 | hypothetical protein | - |
| K8B72_RS27950 (K8B72_27950) | 5790408..5790674 | - | 267 | WP_223193886.1 | DUF2845 domain-containing protein | - |
| K8B72_RS27955 (K8B72_27955) | 5790892..5791191 | + | 300 | WP_003086170.1 | hypothetical protein | - |
| K8B72_RS27960 (K8B72_27960) | 5791285..5791623 | + | 339 | WP_023094867.1 | RAQPRD family integrative conjugative element protein | - |
| K8B72_RS27965 (K8B72_27965) | 5791620..5791859 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| K8B72_RS27970 (K8B72_27970) | 5791877..5792233 | + | 357 | WP_023094868.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| K8B72_RS27975 (K8B72_27975) | 5792244..5792630 | + | 387 | WP_003134190.1 | TIGR03750 family conjugal transfer protein | - |
| K8B72_RS27980 (K8B72_27980) | 5792627..5793286 | + | 660 | WP_003086164.1 | TIGR03746 family integrating conjugative element protein | - |
| K8B72_RS27985 (K8B72_27985) | 5793283..5794167 | + | 885 | WP_003134192.1 | TIGR03749 family integrating conjugative element protein | - |
| K8B72_RS27990 (K8B72_27990) | 5794151..5795656 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| K8B72_RS27995 (K8B72_27995) | 5795634..5796077 | + | 444 | WP_003134194.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| K8B72_RS28000 (K8B72_28000) | 5796077..5799019 | + | 2943 | WP_023094870.1 | conjugative transfer ATPase | - |
| K8B72_RS28005 (K8B72_28005) | 5799016..5799300 | + | 285 | WP_003134196.1 | hypothetical protein | - |
| K8B72_RS28010 (K8B72_28010) | 5799297..5799956 | + | 660 | WP_023094871.1 | DsbA family protein | - |
| K8B72_RS28015 (K8B72_28015) | 5799953..5800171 | - | 219 | WP_004347910.1 | hypothetical protein | - |
| K8B72_RS28020 (K8B72_28020) | 5800571..5801129 | + | 559 | Protein_5552 | recombinase family protein | - |
| K8B72_RS28025 (K8B72_28025) | 5801184..5801858 | - | 675 | WP_044286351.1 | hypothetical protein | - |
| K8B72_RS28030 (K8B72_28030) | 5801941..5802606 | - | 666 | WP_052155769.1 | DUF3218 family protein | - |
| K8B72_RS28035 (K8B72_28035) | 5802620..5803618 | - | 999 | WP_023094874.1 | pesticin C-terminus-like muramidase | - |
| K8B72_RS28040 (K8B72_28040) | 5803882..5806848 | + | 2967 | WP_003134201.1 | Tn3 family transposase | - |
| K8B72_RS28045 (K8B72_28045) | 5808757..5809188 | + | 432 | WP_003134206.1 | TIGR03757 family integrating conjugative element protein | - |
| K8B72_RS28050 (K8B72_28050) | 5809188..5810126 | + | 939 | WP_003086152.1 | TIGR03756 family integrating conjugative element protein | - |
| K8B72_RS28055 (K8B72_28055) | 5810144..5811526 | + | 1383 | WP_003134207.1 | integrating conjugative element protein | - |
| K8B72_RS28060 (K8B72_28060) | 5811526..5811873 | + | 348 | WP_003134208.1 | hypothetical protein | - |
| K8B72_RS28065 (K8B72_28065) | 5811870..5813414 | + | 1545 | WP_003134209.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| K8B72_RS28070 (K8B72_28070) | 5813449..5813802 | - | 354 | WP_003134210.1 | DUF3742 family protein | - |
| K8B72_RS28075 (K8B72_28075) | 5813918..5814190 | + | 273 | WP_003125101.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| K8B72_RS28080 (K8B72_28080) | 5814194..5814544 | + | 351 | WP_003134211.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| K8B72_RS28085 (K8B72_28085) | 5815033..5815977 | - | 945 | WP_225319073.1 | toll/interleukin-1 receptor domain-containing protein | - |
| K8B72_RS28090 (K8B72_28090) | 5816140..5816580 | + | 441 | WP_063837802.1 | hypothetical protein | - |
| K8B72_RS28095 (K8B72_28095) | 5816619..5817296 | + | 678 | WP_003126718.1 | DNA adenine methylase | - |
| K8B72_RS28100 (K8B72_28100) | 5817296..5818129 | + | 834 | WP_023094878.1 | hypothetical protein | - |
| K8B72_RS28105 (K8B72_28105) | 5818064..5818744 | - | 681 | WP_069954859.1 | nitroreductase family protein | - |
| K8B72_RS28110 (K8B72_28110) | 5818722..5819327 | - | 606 | WP_023094879.1 | 7-cyano-7-deazaguanine synthase | - |
| K8B72_RS28115 (K8B72_28115) | 5819324..5820535 | - | 1212 | WP_003134214.1 | PfkB family carbohydrate kinase | - |
| K8B72_RS28120 (K8B72_28120) | 5820556..5820873 | - | 318 | WP_031690684.1 | hypothetical protein | - |
| K8B72_RS28125 (K8B72_28125) | 5821303..5823222 | + | 1920 | WP_023094881.1 | MobH family relaxase | - |
| K8B72_RS28130 (K8B72_28130) | 5823219..5824502 | + | 1284 | WP_003134216.1 | site-specific integrase | - |
| K8B72_RS28140 (K8B72_28140) | 5825008..5825874 | + | 867 | WP_003120956.1 | ParA family protein | - |
| K8B72_RS28145 (K8B72_28145) | 5825876..5826613 | + | 738 | WP_016852973.1 | hypothetical protein | - |
| K8B72_RS28150 (K8B72_28150) | 5826610..5827101 | + | 492 | WP_016852972.1 | hypothetical protein | - |
| K8B72_RS28155 (K8B72_28155) | 5827098..5827760 | + | 663 | WP_023082646.1 | hypothetical protein | - |
| K8B72_RS28160 (K8B72_28160) | 5827757..5828440 | + | 684 | WP_016852970.1 | hypothetical protein | - |
| K8B72_RS28165 (K8B72_28165) | 5828440..5829141 | + | 702 | WP_016852969.1 | DUF2786 domain-containing protein | - |
| K8B72_RS28170 (K8B72_28170) | 5829138..5829845 | + | 708 | WP_016852968.1 | HNH endonuclease signature motif containing protein | - |
| K8B72_RS28175 (K8B72_28175) | 5829829..5830047 | + | 219 | WP_003122068.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|