MGE detailed information
MGE type: Genomic_island MGE length: 17719 bp
Accession: NZ_CP082773 Location: 3602404..3620122 Organism: Escherichia coli O99:H6 strain CU42ET-1 Replicon: chromosome
Accession: NZ_CP082773 Location: 3602404..3620122 Organism: Escherichia coli O99:H6 strain CU42ET-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8B87_RS17215 (3598537) | 3598537..3598878 | + | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| K8B87_RS17220 (3598940) | 3598940..3599230 | - | 291 | WP_001117834.1 | RnfH family protein | - |
| K8B87_RS17225 (3599220) | 3599220..3599657 | - | 438 | WP_001339419.1 | type II toxin-antitoxin system toxin RatA | - |
| K8B87_RS17230 (3599828) | 3599828..3600310 | + | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| K8B87_RS17240 (3601092) | 3601092..3602333 | + | 1242 | WP_087602716.1 | integrase | - |
| K8B87_RS17245 (3602404) | 3602404..3603267 | - | 864 | WP_087602717.1 | hypothetical protein | - |
| K8B87_RS17250 (3603393) | 3603393..3603605 | + | 213 | WP_013365117.1 | AlpA family transcriptional regulator | - |
| K8B87_RS17255 (3603632) | 3603632..3605146 | + | 1515 | WP_087602718.1 | YfjI family protein | - |
| K8B87_RS17260 (3605411) | 3605411..3606109 | + | 699 | WP_087602719.1 | inovirus Gp2 family protein | - |
| K8B87_RS17265 (3606471) | 3606471..3607625 | - | 1155 | WP_087602720.1 | UvrD-helicase domain-containing protein | - |
| K8B87_RS17270 (3607618) | 3607618..3609276 | - | 1659 | WP_087602721.1 | AAA family ATPase | - |
| K8B87_RS17275 (3609331) | 3609331..3609786 | - | 456 | WP_087602722.1 | TolC family protein | - |
| K8B87_RS17280 (3610109) | 3610109..3611209 | + | 1101 | WP_087602723.1 | nucleotide-binding protein | - |
| K8B87_RS17285 (3611245) | 3611245..3612375 | + | 1131 | WP_087602724.1 | DUF4238 domain-containing protein | - |
| K8B87_RS17290 (3612749) | 3612749..3613423 | + | 675 | WP_087603050.1 | hypothetical protein | - |
| K8B87_RS17295 (3613650) | 3613650..3614513 | + | 864 | WP_070713199.1 | GTPase family protein | - |
| K8B87_RS17300 (3614608) | 3614608..3615432 | + | 825 | WP_087603040.1 | DUF932 domain-containing protein | - |
| K8B87_RS17305 (3615641) | 3615641..3616351 | + | 711 | WP_070713206.1 | DeoR family transcriptional regulator | - |
| K8B87_RS17310 (3616377) | 3616377..3616913 | + | 537 | WP_087603039.1 | DUF4339 domain-containing protein | - |
| K8B87_RS17315 (3616955) | 3616955..3617392 | + | 438 | WP_023301392.1 | hypothetical protein | - |
| K8B87_RS17320 (3617459) | 3617459..3617869 | + | 411 | WP_087603038.1 | hypothetical protein | - |
| K8B87_RS17325 (3617947) | 3617947..3618183 | + | 237 | WP_087603037.1 | DUF905 domain-containing protein | - |
| K8B87_RS17330 (3618264) | 3618264..3618722 | + | 459 | WP_087603036.1 | antirestriction protein | - |
| K8B87_RS17335 (3618738) | 3618738..3619214 | + | 477 | WP_087603035.1 | RadC family protein | - |
| K8B87_RS17340 (3619223) | 3619223..3619444 | + | 222 | WP_087603034.1 | DUF987 domain-containing protein | - |
| K8B87_RS17345 (3619464) | 3619464..3619781 | + | 318 | WP_087603033.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| K8B87_RS17350 (3619802) | 3619802..3620122 | + | 321 | WP_087603032.1 | TA system toxin CbtA family protein | Toxin Detail |
| K8B87_RS17355 (3620252) | 3620252..3620929 | + | 678 | WP_032154903.1 | IS66-like element accessory protein TnpA | - |
| K8B87_RS17360 (3620929) | 3620929..3621276 | + | 348 | WP_234257607.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| K8B87_RS17365 (3621296) | 3621296..3622867 | + | 1572 | WP_021563310.1 | IS66 family transposase | - |
| K8B87_RS17370 (3623667) | 3623667..3624644 | + | 978 | WP_000993119.1 | glutarate dioxygenase GlaH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|