MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 137838 bp
Accession: NZ_CP082296 Location: 1..137838 Organism: Pantoea agglomerans strain CQ10 Replicon: plasmid p4_CQ10
Accession: NZ_CP082296 Location: 1..137838 Organism: Pantoea agglomerans strain CQ10 Replicon: plasmid p4_CQ10
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6R05_RS20910 (K6R05_20910) | 13..1275 | + | 1263 | WP_222925834.1 | hypothetical protein | - |
| K6R05_RS20915 (K6R05_20915) | 1275..1931 | + | 657 | WP_222925835.1 | hypothetical protein | - |
| K6R05_RS20920 (K6R05_20920) | 2159..2836 | + | 678 | WP_262390943.1 | hypothetical protein | - |
| K6R05_RS20925 (K6R05_20925) | 3306..4361 | + | 1056 | WP_222925836.1 | putative urea ABC transporter substrate-binding protein | - |
| K6R05_RS20930 (K6R05_20930) | 4386..5201 | + | 816 | WP_222925837.1 | ABC transporter permease | - |
| K6R05_RS20935 (K6R05_20935) | 5198..5983 | + | 786 | WP_222925838.1 | Bicarbonate transport ATP-binding protein CmpD | VF |
| K6R05_RS20940 (K6R05_20940) | 5980..6708 | + | 729 | WP_222925839.1 | urea carboxylase-associated family protein | - |
| K6R05_RS20945 (K6R05_20945) | 6719..7354 | + | 636 | WP_222925840.1 | urea carboxylase-associated family protein | - |
| K6R05_RS20950 (K6R05_20950) | 7483..11088 | + | 3606 | WP_222925841.1 | urea carboxylase | - |
| K6R05_RS20955 (K6R05_20955) | 11193..12098 | - | 906 | WP_161734634.1 | HTH-type transcriptional regulator DsdC | VF |
| K6R05_RS20960 (K6R05_20960) | 12198..12971 | + | 774 | WP_222925842.1 | 2OG-Fe(II) oxygenase family protein | - |
| K6R05_RS20965 (K6R05_20965) | 13359..14396 | + | 1038 | WP_222925843.1 | AraC family transcriptional regulator | - |
| K6R05_RS20970 (K6R05_20970) | 14338..15393 | - | 1056 | WP_222925868.1 | alpha/beta fold hydrolase | - |
| K6R05_RS20975 (K6R05_20975) | 15654..16862 | - | 1209 | WP_222925869.1 | aldose 1-epimerase family protein | - |
| K6R05_RS20980 (K6R05_20980) | 17230..17787 | + | 558 | WP_222925844.1 | peroxiredoxin | - |
| K6R05_RS20985 (K6R05_20985) | 17812..19053 | + | 1242 | WP_222925845.1 | thioredoxin family protein | - |
| K6R05_RS20990 (K6R05_20990) | 19125..19679 | + | 555 | WP_161734687.1 | sigma-70 family RNA polymerase sigma factor | - |
| K6R05_RS20995 (K6R05_20995) | 19666..20307 | + | 642 | WP_222925846.1 | DUF1109 domain-containing protein | - |
| K6R05_RS21000 (K6R05_21000) | 20390..21541 | - | 1152 | WP_222925847.1 | MFS transporter | - |
| K6R05_RS21005 (K6R05_21005) | 21662..22432 | + | 771 | WP_161734612.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| K6R05_RS21010 (K6R05_21010) | 22589..22999 | + | 411 | WP_222925848.1 | GFA family protein | - |
| K6R05_RS21015 (K6R05_21015) | 23016..23501 | - | 486 | WP_161734609.1 | DUF1641 domain-containing protein | - |
| K6R05_RS21020 (K6R05_21020) | 23501..26473 | - | 2973 | WP_222925849.1 | formate dehydrogenase subunit alpha | - |
| K6R05_RS21025 (K6R05_21025) | 27272..27892 | + | 621 | WP_222925850.1 | response regulator | - |
| K6R05_RS21030 (K6R05_21030) | 27921..33461 | - | 5541 | WP_222925851.1 | Sensor histidine kinase TmoS | VF |
| K6R05_RS21035 (K6R05_21035) | 33461..33844 | - | 384 | WP_222925852.1 | Response regulator protein TodT | VF |
| K6R05_RS21040 (K6R05_21040) | 33888..34142 | - | 255 | WP_161734595.1 | XapX domain-containing protein | - |
| K6R05_RS21045 (K6R05_21045) | 34145..34366 | - | 222 | WP_222925853.1 | DUF1427 family protein | - |
| K6R05_RS21050 (K6R05_21050) | 34429..35121 | - | 693 | WP_010670331.1 | hydrolase | - |
| K6R05_RS21055 (K6R05_21055) | 35411..37288 | + | 1878 | WP_222925854.1 | amidohydrolase | - |
| K6R05_RS21060 (K6R05_21060) | 37291..37713 | + | 423 | WP_161734587.1 | DoxX family protein | - |
| K6R05_RS21065 (K6R05_21065) | 37700..39328 | + | 1629 | WP_222925855.1 | MFS transporter | - |
| K6R05_RS21070 (K6R05_21070) | 39379..40200 | + | 822 | WP_161734582.1 | alpha/beta hydrolase | - |
| K6R05_RS21075 (K6R05_21075) | 40242..40967 | - | 726 | WP_161734580.1 | pirin family protein | - |
| K6R05_RS21080 (K6R05_21080) | 41131..42111 | - | 981 | WP_161734578.1 | LacI family DNA-binding transcriptional regulator | - |
| K6R05_RS21085 (K6R05_21085) | 42180..43241 | - | 1062 | WP_222925856.1 | sugar phosphate isomerase/epimerase | - |
| K6R05_RS21090 (K6R05_21090) | 43228..44496 | - | 1269 | WP_222925857.1 | MFS transporter | - |
| K6R05_RS21095 (K6R05_21095) | 44642..45553 | - | 912 | WP_222925858.1 | DMT family transporter | - |
| K6R05_RS21100 (K6R05_21100) | 45783..46799 | + | 1017 | WP_222925859.1 | Lipoate-protein ligase A | VF |
| K6R05_RS21105 (K6R05_21105) | 46982..47194 | - | 213 | WP_003855207.1 | RNA chaperone/antiterminator CspA | - |
| K6R05_RS21110 (K6R05_21110) | 47618..48814 | - | 1197 | WP_161734568.1 | MFS transporter | - |
| K6R05_RS21115 (K6R05_21115) | 49119..49868 | + | 750 | WP_161734566.1 | NAD(P)-dependent oxidoreductase | - |
| K6R05_RS21120 (K6R05_21120) | 49983..50876 | - | 894 | WP_161734564.1 | ABC transporter six-transmembrane domain-containing protein | - |
| K6R05_RS21125 (K6R05_21125) | 50981..51565 | + | 585 | WP_222925860.1 | HTH-type transcriptional repressor KstR2 | VF |
| K6R05_RS21130 (K6R05_21130) | 52029..53414 | + | 1386 | WP_222925861.1 | Diaminobutyrate--2-oxoglutarate aminotransferase | VF |
| K6R05_RS21135 (K6R05_21135) | 53429..54895 | + | 1467 | WP_161736891.1 | aspartate aminotransferase family protein | - |
| K6R05_RS21140 (K6R05_21140) | 55861..57174 | - | 1314 | WP_222925862.1 | MFS transporter | - |
| K6R05_RS21145 (K6R05_21145) | 57382..57693 | + | 312 | WP_222925870.1 | VF530 family protein | - |
| K6R05_RS21150 (K6R05_21150) | 57765..59414 | - | 1650 | WP_222925863.1 | malate dehydrogenase (quinone) | - |
| K6R05_RS21155 (K6R05_21155) | 59766..61355 | + | 1590 | WP_222925864.1 | sensor histidine kinase | - |
| K6R05_RS21160 (K6R05_21160) | 61352..62071 | + | 720 | WP_222925865.1 | Transcriptional regulatory protein DcuR | VF |
| K6R05_RS21165 (K6R05_21165) | 62065..63027 | - | 963 | WP_161736156.1 | FAD:protein FMN transferase | - |
| K6R05_RS21170 (K6R05_21170) | 63090..65870 | - | 2781 | WP_161736157.1 | Fumarate reductase flavoprotein subunit | VF |
| K6R05_RS21175 (K6R05_21175) | 66461..67969 | + | 1509 | WP_161736158.1 | anion permease | - |
| K6R05_RS21180 (K6R05_21180) | 68126..69772 | + | 1647 | WP_222925866.1 | class I fumarate hydratase FumA | - |
| K6R05_RS21185 (K6R05_21185) | 70157..70813 | - | 657 | WP_222925801.1 | putative sugar epimerase YhfK | VF |
| K6R05_RS21190 (K6R05_21190) | 70903..71970 | - | 1068 | WP_222925802.1 | SDR family oxidoreductase | - |
| K6R05_RS21195 (K6R05_21195) | 72071..72973 | + | 903 | WP_222925803.1 | HTH-type transcriptional regulator PgrR | VF |
| K6R05_RS21200 (K6R05_21200) | 73294..74736 | + | 1443 | WP_161736163.1 | sugar porter family MFS transporter | - |
| K6R05_RS21205 (K6R05_21205) | 74841..75662 | + | 822 | WP_222925871.1 | TIM barrel protein | - |
| K6R05_RS21210 (K6R05_21210) | 75672..76682 | + | 1011 | WP_222925804.1 | Gfo/Idh/MocA family oxidoreductase | - |
| K6R05_RS21215 (K6R05_21215) | 76819..77292 | - | 474 | WP_222925805.1 | putative lipoprotein YiaD | VF |
| K6R05_RS21220 (K6R05_21220) | 77295..78503 | - | 1209 | WP_222925806.1 | Diguanylate cyclase DgcN | VF |
| K6R05_RS21225 (K6R05_21225) | 78505..79065 | - | 561 | WP_161736168.1 | YfiR family protein | - |
| K6R05_RS21230 (K6R05_21230) | 79426..82128 | - | 2703 | WP_161736169.1 | HTH-type transcriptional regulator MalT | VF |
| K6R05_RS21235 (K6R05_21235) | 82411..84813 | + | 2403 | WP_222925807.1 | maltodextrin phosphorylase | - |
| K6R05_RS21240 (K6R05_21240) | 84822..86888 | + | 2067 | WP_222925808.1 | 4-alpha-glucanotransferase | - |
| K6R05_RS21245 (K6R05_21245) | 87076..87546 | - | 471 | WP_222925809.1 | type II toxin-antitoxin system YhaV family toxin | Toxin Detail |
| K6R05_RS21250 (K6R05_21250) | 87553..87897 | - | 345 | WP_161736173.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
| K6R05_RS21255 (K6R05_21255) | 87996..88211 | - | 216 | WP_222925810.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| K6R05_RS21260 (K6R05_21260) | 88401..89333 | - | 933 | WP_222925811.1 | maltose operon protein MalM | - |
| K6R05_RS21265 (K6R05_21265) | 89432..90733 | - | 1302 | WP_222925812.1 | maltoporin | - |
| K6R05_RS21270 (K6R05_21270) | 90777..91886 | - | 1110 | WP_150015485.1 | Maltose/maltodextrin import ATP-binding protein MalK | VF |
| K6R05_RS21275 (K6R05_21275) | 92249..93439 | + | 1191 | WP_161735456.1 | maltose/maltodextrin ABC transporter substrate-binding protein MalE | - |
| K6R05_RS21280 (K6R05_21280) | 93498..95024 | + | 1527 | WP_222925813.1 | maltose ABC transporter permease MalF | - |
| K6R05_RS21285 (K6R05_21285) | 95057..95947 | + | 891 | WP_013196178.1 | maltose ABC transporter permease MalG | - |
| K6R05_RS21290 (K6R05_21290) | 96033..96641 | - | 609 | WP_161735452.1 | TetR/AcrR family transcriptional regulator | - |
| K6R05_RS21295 (K6R05_21295) | 96616..97233 | - | 618 | WP_161735451.1 | NAD(P)H-dependent oxidoreductase | - |
| K6R05_RS21300 (K6R05_21300) | 97331..98401 | - | 1071 | WP_161735449.1 | iron-containing alcohol dehydrogenase family protein | - |
| K6R05_RS21305 (K6R05_21305) | 98411..99079 | - | 669 | WP_013196174.1 | methionine ABC transporter permease | - |
| K6R05_RS21310 (K6R05_21310) | 99067..99855 | - | 789 | WP_161735445.1 | Methionine import ATP-binding protein MetN 2 | VF |
| K6R05_RS21315 (K6R05_21315) | 99848..100651 | - | 804 | WP_033785173.1 | D-methionine-binding lipoprotein MetQ | VF |
| K6R05_RS21320 (K6R05_21320) | 100687..101706 | - | 1020 | WP_161735443.1 | isopenicillin N synthase family oxygenase | - |
| K6R05_RS21325 (K6R05_21325) | 101837..104152 | - | 2316 | WP_222925814.1 | molybdopterin-dependent oxidoreductase | - |
| K6R05_RS21330 (K6R05_21330) | 104156..104824 | - | 669 | WP_222925815.1 | methionine ABC transporter permease | - |
| K6R05_RS21335 (K6R05_21335) | 104817..105842 | - | 1026 | WP_222925816.1 | Methionine import ATP-binding protein MetN | VF |
| K6R05_RS21340 (K6R05_21340) | 105839..106651 | - | 813 | WP_222925817.1 | MetQ/NlpA family ABC transporter substrate-binding protein | - |
| K6R05_RS21345 (K6R05_21345) | 106870..108063 | + | 1194 | WP_222925818.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| K6R05_RS21350 (K6R05_21350) | 108359..109825 | + | 1467 | WP_095708080.1 | glycine betaine/L-proline transporter ProP | - |
| K6R05_RS21355 (K6R05_21355) | 109879..110466 | - | 588 | WP_222925819.1 | ABATE domain-containing protein | - |
| K6R05_RS21360 (K6R05_21360) | 110644..111510 | + | 867 | WP_222925820.1 | alpha/beta hydrolase | - |
| K6R05_RS21365 (K6R05_21365) | 111563..112111 | - | 549 | WP_222925821.1 | YbhB/YbcL family Raf kinase inhibitor-like protein | - |
| K6R05_RS21370 (K6R05_21370) | 112356..113234 | + | 879 | WP_222925822.1 | HTH-type transcriptional regulator DmlR | VF |
| K6R05_RS21375 (K6R05_21375) | 113240..114883 | - | 1644 | WP_222925823.1 | dihydroxyacetone kinase subunit DhaK | - |
| K6R05_RS21380 (K6R05_21380) | 115135..116283 | + | 1149 | WP_161735424.1 | Lactaldehyde reductase | VF |
| K6R05_RS21385 (K6R05_21385) | 116604..116777 | + | 174 | WP_008924737.1 | GhoT/OrtT family toxin | - |
| K6R05_RS21390 (K6R05_21390) | 116882..117052 | + | 171 | WP_202605013.1 | hypothetical protein | - |
| K6R05_RS21395 (K6R05_21395) | 117227..118426 | + | 1200 | WP_161735422.1 | MFS transporter | - |
| K6R05_RS21400 (K6R05_21400) | 118518..119438 | + | 921 | WP_222925824.1 | glutaminase B | - |
| K6R05_RS21405 (K6R05_21405) | 119588..120293 | - | 706 | Protein_100 | Recombination-promoting nuclease RpnA | VF |
| K6R05_RS21410 (K6R05_21410) | 120510..121448 | - | 939 | WP_222925825.1 | D-2-hydroxyacid dehydrogenase | - |
| K6R05_RS21415 (K6R05_21415) | 121666..122088 | + | 423 | WP_222925826.1 | DUF2946 domain-containing protein | - |
| K6R05_RS21420 (K6R05_21420) | 122134..123864 | + | 1731 | WP_222925827.1 | DUF2534 family protein | - |
| K6R05_RS21425 (K6R05_21425) | 123991..124668 | + | 678 | WP_161735412.1 | pirin family protein | - |
| K6R05_RS21430 (K6R05_21430) | 124711..124938 | - | 228 | WP_161735411.1 | hypothetical protein | - |
| K6R05_RS21435 (K6R05_21435) | 125110..125640 | + | 531 | WP_161735468.1 | YtfJ family protein | - |
| K6R05_RS21440 (K6R05_21440) | 125860..126768 | + | 909 | WP_222925872.1 | polyprenyl synthetase family protein | - |
| K6R05_RS21445 (K6R05_21445) | 126778..128073 | + | 1296 | WP_222925828.1 | glycosyltransferase | - |
| K6R05_RS21450 (K6R05_21450) | 128060..129220 | + | 1161 | WP_222925829.1 | lycopene beta-cyclase CrtY | - |
| K6R05_RS21455 (K6R05_21455) | 129217..130695 | + | 1479 | WP_161735405.1 | phytoene desaturase | - |
| K6R05_RS21460 (K6R05_21460) | 130692..131621 | + | 930 | WP_161735403.1 | phytoene/squalene synthase family protein | - |
| K6R05_RS21465 (K6R05_21465) | 131560..132087 | - | 528 | WP_161735401.1 | sterol desaturase family protein | - |
| K6R05_RS21470 (K6R05_21470) | 132298..133407 | - | 1110 | WP_222925830.1 | Protein FimF | VF |
| K6R05_RS21475 (K6R05_21475) | 133424..135964 | - | 2541 | WP_262390942.1 | Outer membrane usher protein YraJ | VF |
| K6R05_RS21480 (K6R05_21480) | 135999..136667 | - | 669 | WP_222925831.1 | putative fimbrial chaperone YraI | VF |
| K6R05_RS21485 (K6R05_21485) | 136722..137309 | - | 588 | WP_222925832.1 | Type-1 fimbrial protein, A chain | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|