MGE detailed information
MGE type: Mobilizable plasmid MGE length: 160986 bp
Accession: NZ_CP082294 Location: 1..160986 Organism: Pantoea agglomerans strain CQ10 Replicon: plasmid p2_CQ10
Accession: NZ_CP082294 Location: 1..160986 Organism: Pantoea agglomerans strain CQ10 Replicon: plasmid p2_CQ10
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6R05_RS19555 (K6R05_19555) | 1..1074 | + | 1074 | WP_222925685.1 | RepB family plasmid replication initiator protein | - |
| K6R05_RS19560 (K6R05_19560) | 2512..3699 | - | 1188 | WP_222925686.1 | diguanylate phosphodiesterase | - |
| K6R05_RS19565 (K6R05_19565) | 4018..5802 | - | 1785 | WP_161736649.1 | Phytochrome-like protein cph2 | VF |
| K6R05_RS19570 (K6R05_19570) | 6315..6539 | - | 225 | WP_013356498.1 | DUF3606 domain-containing protein | - |
| K6R05_RS19575 (K6R05_19575) | 6911..7150 | + | 240 | WP_161736648.1 | transcriptional regulator | - |
| K6R05_RS19580 (K6R05_19580) | 7324..7812 | + | 489 | WP_222925687.1 | Hsp20 family protein | - |
| K6R05_RS19585 (K6R05_19585) | 7886..8650 | - | 765 | WP_161736646.1 | MerR family transcriptional regulator | - |
| K6R05_RS19590 (K6R05_19590) | 8851..9060 | - | 210 | WP_010256969.1 | CsbD family protein | - |
| K6R05_RS19595 (K6R05_19595) | 9233..10447 | - | 1215 | WP_222925688.1 | diguanylate phosphodiesterase | - |
| K6R05_RS19600 (K6R05_19600) | 11390..11623 | + | 234 | WP_161736644.1 | DNA polymerase V subunit | - |
| K6R05_RS19605 (K6R05_19605) | 11704..12033 | - | 330 | WP_222925689.1 | hypothetical protein | - |
| K6R05_RS19610 (K6R05_19610) | 12653..14311 | + | 1659 | WP_161736642.1 | Methyl-accepting chemotaxis protein III | VF |
| K6R05_RS19615 (K6R05_19615) | 14926..16851 | + | 1926 | WP_222925690.1 | Methyl-accepting chemotaxis protein I | VF |
| K6R05_RS19620 (K6R05_19620) | 16903..17703 | - | 801 | WP_161736677.1 | MBL fold metallo-hydrolase | - |
| K6R05_RS19625 (K6R05_19625) | 17781..18896 | - | 1116 | WP_222925691.1 | metallophosphoesterase | - |
| K6R05_RS19630 (K6R05_19630) | 19116..21443 | - | 2328 | WP_161736675.1 | FdhF/YdeP family oxidoreductase | - |
| K6R05_RS19635 (K6R05_19635) | 21970..22308 | - | 339 | WP_161736674.1 | cupin domain-containing protein | - |
| K6R05_RS19640 (K6R05_19640) | 22511..23239 | + | 729 | WP_222925692.1 | 2-phosphosulfolactate phosphatase | - |
| K6R05_RS19645 (K6R05_19645) | 23294..23641 | - | 348 | WP_013356513.1 | HNH nuclease YajD | - |
| K6R05_RS19650 (K6R05_19650) | 23874..24041 | - | 168 | WP_190285975.1 | hypothetical protein | - |
| K6R05_RS22215 | 24084..24212 | + | 129 | WP_262390934.1 | hypothetical protein | - |
| K6R05_RS19655 (K6R05_19655) | 24326..27430 | + | 3105 | WP_222925693.1 | Multidrug resistance protein MexB | VF |
| K6R05_RS19660 (K6R05_19660) | 27652..27828 | - | 177 | WP_009093122.1 | general stress protein | - |
| K6R05_RS19665 (K6R05_19665) | 28030..28323 | + | 294 | WP_161736671.1 | hypothetical protein | - |
| K6R05_RS19670 (K6R05_19670) | 28448..28687 | - | 240 | WP_161736679.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| K6R05_RS19675 (K6R05_19675) | 29046..31019 | + | 1974 | WP_222925694.1 | Aerotaxis receptor | VF |
| K6R05_RS19680 (K6R05_19680) | 31124..32140 | + | 1017 | WP_107320469.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| K6R05_RS19685 (K6R05_19685) | 32415..33194 | + | 780 | WP_222925695.1 | MBL fold metallo-hydrolase | - |
| K6R05_RS19690 (K6R05_19690) | 33270..34262 | + | 993 | WP_222925696.1 | HTH-type transcriptional regulator CdhR | VF |
| K6R05_RS19695 (K6R05_19695) | 34353..34754 | - | 402 | WP_161736736.1 | H-NS family nucleoid-associated regulatory protein | - |
| K6R05_RS19700 (K6R05_19700) | 35029..36600 | + | 1572 | WP_161736737.1 | sensor domain-containing diguanylate cyclase | - |
| K6R05_RS19705 (K6R05_19705) | 36656..37108 | + | 453 | WP_262390935.1 | VOC family protein | - |
| K6R05_RS19710 (K6R05_19710) | 37333..37734 | - | 402 | WP_098049800.1 | H-NS family nucleoid-associated regulatory protein | - |
| K6R05_RS19715 (K6R05_19715) | 38943..39128 | + | 186 | WP_135911148.1 | DUF2256 domain-containing protein | - |
| K6R05_RS19720 (K6R05_19720) | 39173..39475 | - | 303 | WP_161736744.1 | hypothetical protein | - |
| K6R05_RS19725 (K6R05_19725) | 39588..40130 | - | 543 | WP_222925698.1 | YfaZ family outer membrane protein | - |
| K6R05_RS19730 (K6R05_19730) | 40193..40429 | - | 237 | WP_161736740.1 | YgdI/YgdR family lipoprotein | - |
| K6R05_RS19735 (K6R05_19735) | 40814..41233 | + | 420 | WP_253418486.1 | DUF1090 family protein | - |
| K6R05_RS19740 (K6R05_19740) | 41891..42271 | + | 381 | WP_222925699.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| K6R05_RS19745 (K6R05_19745) | 42985..43266 | - | 282 | WP_161736743.1 | hypothetical protein | - |
| K6R05_RS19750 (K6R05_19750) | 43937..44410 | - | 474 | WP_222925700.1 | WbuC family cupin fold metalloprotein | - |
| K6R05_RS19755 (K6R05_19755) | 44734..44958 | + | 225 | WP_222925701.1 | FeoA domain-containing protein | - |
| K6R05_RS19760 (K6R05_19760) | 44958..47285 | + | 2328 | WP_222925702.1 | Fe(2+) transporter FeoB | VF |
| K6R05_RS19765 (K6R05_19765) | 47400..48395 | - | 996 | WP_237566751.1 | alpha/beta hydrolase | - |
| K6R05_RS19770 (K6R05_19770) | 48753..49133 | + | 381 | WP_222925703.1 | hypothetical protein | - |
| K6R05_RS19775 (K6R05_19775) | 49598..50638 | - | 1041 | WP_222925704.1 | tyrosine-type recombinase/integrase | - |
| K6R05_RS19780 (K6R05_19780) | 51575..52045 | + | 471 | WP_161736457.1 | SgcJ/EcaC family oxidoreductase | - |
| K6R05_RS19785 (K6R05_19785) | 52350..53561 | - | 1212 | WP_222925705.1 | monooxygenase | - |
| K6R05_RS19790 (K6R05_19790) | 53554..55014 | - | 1461 | WP_222925719.1 | MFS transporter | - |
| K6R05_RS19795 (K6R05_19795) | 55277..56689 | - | 1413 | WP_222925706.1 | LLM class flavin-dependent oxidoreductase | - |
| K6R05_RS19800 (K6R05_19800) | 56758..58170 | - | 1413 | WP_222925707.1 | FAD-dependent oxidoreductase | - |
| K6R05_RS19805 (K6R05_19805) | 58197..59369 | - | 1173 | WP_222925708.1 | FMNH2-dependent alkanesulfonate monooxygenase | - |
| K6R05_RS19810 (K6R05_19810) | 59644..61533 | + | 1890 | WP_161736452.1 | Transcriptional regulatory protein ZraR | VF |
| K6R05_RS19815 (K6R05_19815) | 61629..62576 | + | 948 | WP_161736451.1 | sulfonate ABC transporter substrate-binding protein | - |
| K6R05_RS19820 (K6R05_19820) | 62934..64067 | + | 1134 | WP_222925709.1 | glutathione-independent formaldehyde dehydrogenase | - |
| K6R05_RS22220 | 64405..64611 | + | 207 | WP_262390936.1 | antitoxin | - |
| K6R05_RS19825 (K6R05_19825) | 64663..64950 | - | 288 | Protein_56 | HigA family addiction module antitoxin | - |
| K6R05_RS19830 (K6R05_19830) | 65221..65916 | + | 696 | WP_222925710.1 | haloacid dehalogenase type II | - |
| K6R05_RS19835 (K6R05_19835) | 65954..67483 | - | 1530 | WP_161736625.1 | hypothetical protein | VF |
| K6R05_RS19840 (K6R05_19840) | 67630..67995 | - | 366 | WP_161736624.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF | - |
| K6R05_RS19845 (K6R05_19845) | 67992..68312 | - | 321 | WP_222925711.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE | - |
| K6R05_RS19850 (K6R05_19850) | 68312..69979 | - | 1668 | WP_222925712.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
| K6R05_RS19855 (K6R05_19855) | 69979..70881 | - | 903 | WP_161736621.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase | - |
| K6R05_RS19860 (K6R05_19860) | 70881..72860 | - | 1980 | WP_222925713.1 | Bifunctional polymyxin resistance protein ArnA | VF |
| K6R05_RS19865 (K6R05_19865) | 72857..73840 | - | 984 | WP_222925714.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| K6R05_RS19870 (K6R05_19870) | 73842..74978 | - | 1137 | WP_222925715.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| K6R05_RS19875 (K6R05_19875) | 75672..76250 | + | 579 | WP_222925720.1 | YceI family protein | - |
| K6R05_RS19880 (K6R05_19880) | 76277..77062 | - | 786 | WP_222925716.1 | hypothetical protein | - |
| K6R05_RS19885 (K6R05_19885) | 77059..77508 | - | 450 | WP_253418431.1 | sigma-70 family RNA polymerase sigma factor | - |
| K6R05_RS19890 (K6R05_19890) | 77596..78132 | - | 537 | WP_161736616.1 | tetratricopeptide repeat protein | - |
| K6R05_RS19895 (K6R05_19895) | 78276..79289 | - | 1014 | WP_222925717.1 | Gfo/Idh/MocA family oxidoreductase | - |
| K6R05_RS19900 (K6R05_19900) | 79397..80407 | + | 1011 | WP_161736614.1 | LacI family DNA-binding transcriptional regulator | - |
| K6R05_RS19905 (K6R05_19905) | 81036..81467 | + | 432 | WP_222925648.1 | PACE efflux transporter | - |
| K6R05_RS19910 (K6R05_19910) | 81713..81916 | + | 204 | WP_150015823.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| K6R05_RS22225 | 82105..86253 | - | 4149 | WP_262390932.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| K6R05_RS19925 (K6R05_19925) | 86877..87125 | - | 249 | WP_161736942.1 | DUF333 domain-containing protein | - |
| K6R05_RS19930 (K6R05_19930) | 87745..90672 | + | 2928 | WP_222925649.1 | Adhesin/invasin TibA autotransporter | VF |
| K6R05_RS19935 (K6R05_19935) | 90713..91027 | + | 315 | WP_222925650.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| K6R05_RS19940 (K6R05_19940) | 91575..92210 | - | 636 | WP_161736945.1 | Transcriptional activator protein BglJ | VF |
| K6R05_RS19945 (K6R05_19945) | 92247..92837 | - | 591 | WP_161736946.1 | helix-turn-helix domain-containing protein | - |
| K6R05_RS19950 (K6R05_19950) | 93885..94202 | + | 318 | WP_161736960.1 | hypothetical protein | - |
| K6R05_RS19955 (K6R05_19955) | 94212..94433 | + | 222 | WP_222925651.1 | hypothetical protein | - |
| K6R05_RS19960 (K6R05_19960) | 94505..95068 | + | 564 | WP_262390933.1 | Major fimbrial subunit SMF-1 | VF |
| K6R05_RS19965 (K6R05_19965) | 95130..95867 | + | 738 | WP_222925652.1 | putative fimbrial chaperone YadV | VF |
| K6R05_RS19970 (K6R05_19970) | 95894..98479 | + | 2586 | WP_222925653.1 | Outer membrane usher protein HtrE | VF |
| K6R05_RS19975 (K6R05_19975) | 98492..99553 | + | 1062 | WP_161736965.1 | S-fimbrial protein subunit SfaG | VF |
| K6R05_RS19980 (K6R05_19980) | 99610..100272 | + | 663 | WP_222925654.1 | Transcriptional regulatory protein RcsB | VF |
| K6R05_RS19985 (K6R05_19985) | 100312..101634 | + | 1323 | WP_161736323.1 | TolC family outer membrane protein | - |
| K6R05_RS19990 (K6R05_19990) | 101660..102919 | + | 1260 | WP_161736322.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| K6R05_RS19995 (K6R05_19995) | 102937..105120 | + | 2184 | WP_222925655.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| K6R05_RS20000 (K6R05_20000) | 105113..105544 | + | 432 | WP_161736320.1 | DcrB-related protein | - |
| K6R05_RS20005 (K6R05_20005) | 105621..106118 | - | 498 | WP_161736319.1 | FidL-like protein | - |
| K6R05_RS20010 (K6R05_20010) | 106115..106948 | - | 834 | WP_161736318.1 | winged helix-turn-helix domain-containing protein | - |
| K6R05_RS20015 (K6R05_20015) | 107267..107881 | + | 615 | WP_161736317.1 | HTH-type transcriptional regulator BetI | VF |
| K6R05_RS20020 (K6R05_20020) | 108119..109402 | + | 1284 | WP_222925656.1 | beta-ketoacyl-ACP synthase II | - |
| K6R05_RS20025 (K6R05_20025) | 109642..110529 | + | 888 | WP_222925657.1 | ROK family protein | - |
| K6R05_RS20030 (K6R05_20030) | 110634..111584 | - | 951 | WP_222925658.1 | Recombination-promoting nuclease RpnD | VF |
| K6R05_RS20035 (K6R05_20035) | 112046..112831 | - | 786 | WP_222925659.1 | MipA/OmpV family protein | - |
| K6R05_RS20040 (K6R05_20040) | 112961..113656 | + | 696 | WP_222925660.1 | Response regulator ArlR | VF |
| K6R05_RS20045 (K6R05_20045) | 113653..114822 | + | 1170 | WP_222925661.1 | ATP-binding protein | - |
| K6R05_RS20050 (K6R05_20050) | 114916..116049 | + | 1134 | WP_222925662.1 | efflux RND transporter periplasmic adaptor subunit | - |
| K6R05_RS20055 (K6R05_20055) | 116046..119090 | + | 3045 | WP_222925663.1 | efflux RND transporter permease subunit | - |
| K6R05_RS20060 (K6R05_20060) | 119152..119397 | - | 246 | WP_013356609.1 | hypothetical protein | - |
| K6R05_RS20065 (K6R05_20065) | 119469..120374 | - | 906 | WP_161736309.1 | LysR family transcriptional regulator | - |
| K6R05_RS20070 (K6R05_20070) | 120479..121261 | + | 783 | WP_222925664.1 | acetolactate decarboxylase | - |
| K6R05_RS20075 (K6R05_20075) | 121276..122955 | + | 1680 | WP_222925665.1 | acetolactate synthase AlsS | - |
| K6R05_RS20080 (K6R05_20080) | 122977..123750 | + | 774 | WP_161736306.1 | Diacetyl reductase [(S)-acetoin forming] | VF |
| K6R05_RS20085 (K6R05_20085) | 123955..125409 | + | 1455 | WP_222925666.1 | Flagellin | VF |
| K6R05_RS20090 (K6R05_20090) | 125747..127060 | + | 1314 | WP_161736640.1 | CitMHS family transporter | - |
| K6R05_RS20095 (K6R05_20095) | 127226..128065 | + | 840 | WP_161736639.1 | MBL fold metallo-hydrolase | - |
| K6R05_RS20100 (K6R05_20100) | 128224..128475 | + | 252 | WP_222925667.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | Antitoxin Detail |
| K6R05_RS20105 (K6R05_20105) | 128472..128726 | + | 255 | WP_161736637.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| K6R05_RS20110 (K6R05_20110) | 128800..131337 | - | 2538 | WP_222925668.1 | UvrABC system protein A | VF |
| K6R05_RS20115 (K6R05_20115) | 131558..131950 | - | 393 | WP_222925669.1 | transcriptional regulator | - |
| K6R05_RS20120 (K6R05_20120) | 131950..132051 | - | 102 | WP_260059782.1 | type II toxin-antitoxin system HigB family toxin | - |
| K6R05_RS20125 (K6R05_20125) | 132305..133768 | - | 1464 | WP_222925670.1 | YsnF/AvaK domain-containing protein | - |
| K6R05_RS20130 (K6R05_20130) | 134045..134614 | - | 570 | WP_222925671.1 | Pyridoxine/pyridoxamine 5'-phosphate oxidase | VF |
| K6R05_RS20135 (K6R05_20135) | 134868..135446 | + | 579 | WP_222925672.1 | GNAT family protein | - |
| K6R05_RS20140 (K6R05_20140) | 135506..137635 | - | 2130 | WP_222925673.1 | EAL domain-containing protein | - |
| K6R05_RS20145 (K6R05_20145) | 138063..138302 | - | 240 | WP_161736630.1 | transcriptional regulator | - |
| K6R05_RS20150 (K6R05_20150) | 138718..140100 | - | 1383 | WP_222925674.1 | Methyl-accepting chemotaxis protein II | VF |
| K6R05_RS20155 (K6R05_20155) | 140448..142229 | + | 1782 | WP_222925675.1 | GGDEF and EAL domain-containing protein | - |
| K6R05_RS20160 (K6R05_20160) | 142254..143837 | - | 1584 | WP_161736553.1 | diguanylate cyclase | - |
| K6R05_RS20165 (K6R05_20165) | 144234..144443 | - | 210 | WP_061061018.1 | hypothetical protein | - |
| K6R05_RS20170 (K6R05_20170) | 144920..145831 | + | 912 | WP_222925676.1 | N-acetyltransferase | - |
| K6R05_RS20175 (K6R05_20175) | 145833..146078 | - | 246 | WP_161736555.1 | hypothetical protein | - |
| K6R05_RS20180 (K6R05_20180) | 146294..146827 | + | 534 | WP_161736556.1 | SRPBCC family protein | - |
| K6R05_RS20185 (K6R05_20185) | 146828..147994 | + | 1167 | WP_222925677.1 | zinc-dependent alcohol dehydrogenase | - |
| K6R05_RS20190 (K6R05_20190) | 148316..148861 | + | 546 | WP_222925678.1 | chorismate mutase | - |
| K6R05_RS20195 (K6R05_20195) | 148884..150074 | + | 1191 | WP_222925679.1 | cytochrome P450 | - |
| K6R05_RS20200 (K6R05_20200) | 150103..151107 | - | 1005 | WP_222925680.1 | substrate-binding domain-containing protein | - |
| K6R05_RS20205 (K6R05_20205) | 151137..152546 | - | 1410 | WP_222925681.1 | sucrose-6-phosphate hydrolase | - |
| K6R05_RS20210 (K6R05_20210) | 152546..153916 | - | 1371 | WP_161736562.1 | sucrose-specific PTS transporter subunit IIBC | - |
| K6R05_RS20215 (K6R05_20215) | 153984..155519 | - | 1536 | WP_222925682.1 | carbohydrate porin | - |
| K6R05_RS20220 (K6R05_20220) | 155680..156606 | - | 927 | WP_222925683.1 | aminoimidazole riboside kinase | - |
| K6R05_RS20225 (K6R05_20225) | 156827..157798 | - | 972 | WP_222925684.1 | ParB family protein | - |
| K6R05_RS20230 (K6R05_20230) | 157795..158997 | - | 1203 | WP_161736566.1 | Plasmid partition protein A | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|