MGE detailed information
MGE type: IScluster/Tn MGE length: 9521 bp
Accession: NZ_CP082178 Location: 1529399..1538919 Organism: Xanthomonas fragariae strain SHQP01 Replicon: chromosome
Accession: NZ_CP082178 Location: 1529399..1538919 Organism: Xanthomonas fragariae strain SHQP01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K4A87_RS07125 (K4A87_07115) | 1524474..1525931 | + | 1458 | WP_208591598.1 | IMP dehydrogenase | - |
| K4A87_RS07130 (K4A87_07120) | 1526057..1527622 | + | 1566 | WP_208590565.1 | glutamine-hydrolyzing GMP synthase | - |
| K4A87_RS07135 (K4A87_07125) | 1527929..1529130 | + | 1202 | Protein_1328 | tyrosine-type recombinase/integrase | - |
| K4A87_RS07140 (K4A87_07130) | 1529399..1530612 | + | 1214 | WP_208590567.1 | IS3 family transposase ISAzsp1 | Transposase |
| K4A87_RS07155 (K4A87_07145) | 1533027..1533560 | + | 534 | Protein_1332 | IS701 family transposase ISAzvi8 | Transposase |
| K4A87_RS07160 (K4A87_07150) | 1533644..1534138 | - | 495 | WP_208590579.1 | hypothetical protein | - |
| K4A87_RS07165 (K4A87_07155) | 1534708..1534989 | + | 282 | WP_002805735.1 | TraK family protein | - |
| K4A87_RS07170 (K4A87_07160) | 1535356..1535655 | + | 300 | WP_238135661.1 | Arc family DNA-binding protein | Antitoxin Detail |
| K4A87_RS07175 (K4A87_07165) | 1535652..1536071 | + | 420 | WP_208590583.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K4A87_RS07180 | 1536404..1536511 | + | 108 | WP_238135662.1 | helix-turn-helix domain-containing protein | - |
| K4A87_RS07185 | 1536750..1536845 | + | 96 | Protein_1338 | IS30 family transposase | - |
| K4A87_RS07190 (K4A87_07175) | 1536995..1537225 | + | 231 | Protein_1339 | transposase | - |
| K4A87_RS07195 (K4A87_07180) | 1537290..1538261 | + | 972 | WP_208590244.1 | IS5 family transposase IS1646 | Transposase |
| K4A87_RS07200 (K4A87_07185) | 1538390..1538970 | + | 581 | Protein_1341 | IS5/IS1182 family transposase | - |
| K4A87_RS07205 (K4A87_07190) | 1539063..1539437 | - | 375 | WP_208590590.1 | Mth938-like domain-containing protein | - |
| K4A87_RS07210 (K4A87_07195) | 1539454..1539759 | - | 306 | WP_208590591.1 | ribosome assembly RNA-binding protein YhbY | - |
| K4A87_RS07215 (K4A87_07200) | 1539826..1540458 | + | 633 | WP_208590599.1 | 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE | - |
| K4A87_RS07220 (K4A87_07205) | 1540520..1542460 | + | 1941 | WP_208590606.1 | ATP-dependent zinc metalloprotease FtsH | - |
| K4A87_RS07225 (K4A87_07210) | 1542882..1543784 | + | 903 | WP_208590608.1 | dihydropteroate synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|