MGE detailed information
MGE type: IScluster/Tn MGE length: 12736 bp
Accession: NZ_CP082178 Location: 1377444..1390179 Organism: Xanthomonas fragariae strain SHQP01 Replicon: chromosome
Accession: NZ_CP082178 Location: 1377444..1390179 Organism: Xanthomonas fragariae strain SHQP01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K4A87_RS06500 (K4A87_06440) | 1372895..1373527 | - | 633 | WP_208590274.1 | uracil phosphoribosyltransferase | - |
| K4A87_RS06505 | 1373873..1374336 | + | 464 | Protein_1208 | phosphoesterase | - |
| K4A87_RS06510 (K4A87_06455) | 1374472..1375179 | + | 708 | WP_208590286.1 | glycosyltransferase | - |
| K4A87_RS06515 (K4A87_06460) | 1375276..1376772 | - | 1497 | WP_208590293.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| K4A87_RS06520 (K4A87_06465) | 1376894..1377325 | + | 432 | WP_208590296.1 | Lrp/AsnC family transcriptional regulator | - |
| K4A87_RS06525 (K4A87_06470) | 1377444..1378657 | + | 1214 | WP_208590298.1 | IS3 family transposase ISAzsp1 | Transposase |
| K4A87_RS06530 (K4A87_06475) | 1378925..1379209 | + | 285 | WP_208590300.1 | hypothetical protein | - |
| K4A87_RS06535 (K4A87_06480) | 1379260..1380231 | + | 972 | WP_208590244.1 | IS5 family transposase IS1646 | Transposase |
| K4A87_RS06540 (K4A87_06485) | 1380418..1381431 | + | 1014 | Protein_1215 | IS701 family transposase ISAzvi8 | Transposase |
| K4A87_RS06550 (K4A87_06495) | 1381786..1382520 | + | 735 | WP_238135654.1 | hypothetical protein | - |
| K4A87_RS06560 | 1384199..1384489 | - | 291 | WP_238135655.1 | IS5 family transposase IS1421 | Transposase |
| K4A87_RS06565 (K4A87_06510) | 1384925..1385730 | + | 806 | WP_208591587.1 | IS5 family transposase | - |
| K4A87_RS06570 (K4A87_06515) | 1385755..1386069 | + | 315 | WP_238135656.1 | hypothetical protein | - |
| K4A87_RS06575 (K4A87_06520) | 1386397..1387884 | + | 1488 | WP_208590304.1 | hypothetical protein ; Integrase | Integrase |
| K4A87_RS06580 (K4A87_06525) | 1387930..1388247 | - | 318 | WP_208590306.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| K4A87_RS06585 (K4A87_06530) | 1388247..1388609 | - | 363 | WP_208590308.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K4A87_RS06595 (K4A87_06540) | 1390432..1392597 | + | 2166 | WP_208587611.1 | type I secretion system permease/ATPase | - |
| K4A87_RS06600 (K4A87_06545) | 1392594..1394015 | + | 1422 | WP_238135657.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| K4A87_RS06605 (K4A87_06550) | 1394361..1395044 | + | 684 | WP_208590314.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|