MGE detailed information
MGE type: Mobilizable plasmid MGE length: 48592 bp
Accession: NZ_CP082123 Location: 1..48592 Organism: Escherichia coli strain PC-NDM34 Replicon: plasmid pIncI
Accession: NZ_CP082123 Location: 1..48592 Organism: Escherichia coli strain PC-NDM34 Replicon: plasmid pIncI
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5P75_RS24670 (46) | 46..1077 | + | 1032 | WP_023518831.1 | plasmid replication initiator RepA | - |
| K5P75_RS24675 (1773) | 1773..1913 | + | 141 | WP_032072206.1 | hypothetical protein | - |
| K5P75_RS24680 (2146) | 2146..2655 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| K5P75_RS24685 (2711) | 2711..3313 | - | 603 | WP_001703912.1 | ProQ/FINO family protein | - |
| K5P75_RS24690 (3667) | 3667..5013 | + | 1347 | WP_039052405.1 | protein YagA | - |
| K5P75_RS24695 (5568) | 5568..5870 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| K5P75_RS24700 (5867) | 5867..6493 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| K5P75_RS24705 (6681) | 6681..7952 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| K5P75_RS24710 (7952) | 7952..8389 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| K5P75_RS24715 (8386) | 8386..8634 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| K5P75_RS24720 (9052) | 9052..9954 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| K5P75_RS25570 (9958) | 9958..10044 | + | 87 | Protein_11 | hypothetical protein | - |
| K5P75_RS24725 (10049) | 10049..10384 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| K5P75_RS24730 (10722) | 10722..11702 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| K5P75_RS24735 (11705) | 11705..12127 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| K5P75_RS24740 (12131) | 12131..12441 | + | 311 | Protein_15 | hypothetical protein | - |
| K5P75_RS24745 (12517) | 12517..13200 | + | 684 | WP_000086127.1 | DNA methylase | - |
| K5P75_RS24750 (13201) | 13201..13422 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| K5P75_RS24755 (13352) | 13352..13870 | + | 519 | WP_202864534.1 | DUF1380 family protein | - |
| K5P75_RS24760 (13915) | 13915..14685 | + | 771 | WP_011264064.1 | hypothetical protein | - |
| K5P75_RS24765 (15103) | 15103..15528 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| K5P75_RS24770 (15575) | 15575..15997 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| K5P75_RS24775 (15994) | 15994..16185 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| K5P75_RS24780 (16256) | 16256..16570 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| K5P75_RS24785 (17606) | 17606..19507 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| K5P75_RS24790 (19690) | 19690..20979 | + | 1290 | Protein_25 | hypothetical protein | - |
| K5P75_RS24795 (21032) | 21032..21466 | + | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| K5P75_RS24800 (21463) | 21463..22182 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| K5P75_RS24805 (22179) | 22179..22775 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| K5P75_RS24810 (23237) | 23237..23737 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| K5P75_RS24815 (24466) | 24466..24900 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| K5P75_RS24820 (24994) | 24994..25260 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| K5P75_RS24825 (25437) | 25437..25826 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| K5P75_RS24830 (25823) | 25823..26725 | + | 903 | WP_011264057.1 | Recombination-promoting nuclease RpnA | VF |
| K5P75_RS24835 (26787) | 26787..26993 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| K5P75_RS24840 (27024) | 27024..27275 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| K5P75_RS24850 (27855) | 27855..28703 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| K5P75_RS24855 (28790) | 28790..29125 | - | 336 | WP_021529212.1 | hypothetical protein | - |
| K5P75_RS24860 (29359) | 29359..29691 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| K5P75_RS24865 (29702) | 29702..32401 | + | 2700 | WP_011264053.1 | Protein TraI | Relaxase |
| K5P75_RS24870 (32439) | 32439..34730 | - | 2292 | WP_011264051.1 | F-type conjugative transfer protein TrbC | - |
| K5P75_RS24875 (34723) | 34723..35793 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| K5P75_RS24880 (35812) | 35812..37020 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (37200) | 37200..37257 | - | 58 | NuclAT_1 | - | - |
| - (37200) | 37200..37257 | - | 58 | NuclAT_1 | - | - |
| - (37200) | 37200..37257 | - | 58 | NuclAT_1 | - | - |
| - (37200) | 37200..37257 | - | 58 | NuclAT_1 | - | - |
| K5P75_RS24885 (37327) | 37327..38109 | - | 783 | WP_023063753.1 | protein FinQ | - |
| K5P75_RS24890 (38305) | 38305..38622 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| K5P75_RS24895 (38619) | 38619..39152 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| K5P75_RS24900 (39246) | 39246..40391 | - | 1146 | WP_039023136.1 | Beta-lactamase | ARG |
| K5P75_RS25575 (41596) | 41596..41694 | + | 99 | Protein_48 | ethanolamine utilization protein EutE | - |
| K5P75_RS24910 (41766) | 41766..41975 | - | 210 | WP_134892286.1 | HEAT repeat domain-containing protein | - |
| K5P75_RS24915 (42367) | 42367..42543 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| K5P75_RS24920 (42608) | 42608..42904 | - | 297 | WP_011264046.1 | DinQ-like type I toxin DqlB | - |
| K5P75_RS24925 (43204) | 43204..43455 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| K5P75_RS24930 (43527) | 43527..43679 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (43731) | 43731..43791 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43731) | 43731..43791 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43731) | 43731..43791 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43731) | 43731..43791 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| K5P75_RS24935 (44000) | 44000..44374 | + | 375 | WP_223349261.1 | hypothetical protein | - |
| K5P75_RS24940 (44527) | 44527..45684 | + | 1158 | Protein_55 | IS1380 family transposase ISEcp1 | Transposase |
| K5P75_RS24945 (45740) | 45740..46437 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| K5P75_RS24950 (46448) | 46448..46756 | - | 309 | WP_039023235.1 | transcription termination/antitermination NusG family protein | - |
| K5P75_RS24955 (47198) | 47198..47485 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| K5P75_RS25580 (47523) | 47523..47681 | - | 159 | Protein_59 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|