MGE detailed information
MGE type: Conjugative plasmid MGE length: 41441 bp
Accession: NZ_CP081945 Location: 1..41441 Organism: Pseudomonas sp. DR208 Replicon: plasmid pDR208
Accession: NZ_CP081945 Location: 1..41441 Organism: Pseudomonas sp. DR208 Replicon: plasmid pDR208
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5K89_RS28320 (K5K89_28320) | 64..636 | + | 573 | WP_222541775.1 | helix-turn-helix domain-containing protein | - |
| K5K89_RS28325 (K5K89_28325) | 638..1147 | + | 510 | WP_222541776.1 | hypothetical protein | - |
| K5K89_RS28330 (K5K89_28330) | 1158..2426 | + | 1269 | WP_222541777.1 | DUF1173 family protein | - |
| K5K89_RS28335 (K5K89_28335) | 3058..4341 | - | 1284 | WP_222541778.1 | Y-family DNA polymerase | - |
| K5K89_RS28340 (K5K89_28340) | 4331..4759 | - | 429 | WP_222541779.1 | S24 family peptidase | - |
| K5K89_RS28345 (K5K89_28345) | 5350..5646 | - | 297 | WP_011475354.1 | putative addiction module antidote protein | Antitoxin Detail |
| K5K89_RS28350 (K5K89_28350) | 5643..5945 | - | 303 | WP_011475355.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K5K89_RS28355 (K5K89_28355) | 6155..6373 | + | 219 | WP_219022106.1 | hypothetical protein | - |
| K5K89_RS28360 (K5K89_28360) | 6437..6598 | + | 162 | WP_169882213.1 | hypothetical protein | - |
| K5K89_RS28365 (K5K89_28365) | 6793..7089 | + | 297 | WP_222541780.1 | hypothetical protein | - |
| K5K89_RS28370 (K5K89_28370) | 7095..7388 | + | 294 | WP_222541781.1 | hypothetical protein | - |
| K5K89_RS28375 (K5K89_28375) | 7510..7752 | + | 243 | WP_110973482.1 | hypothetical protein | - |
| K5K89_RS28380 (K5K89_28380) | 7804..9486 | + | 1683 | WP_222541782.1 | DNA cytosine methyltransferase | - |
| K5K89_RS28385 (K5K89_28385) | 9568..9786 | + | 219 | WP_110973480.1 | hypothetical protein | - |
| K5K89_RS28390 (K5K89_28390) | 9798..10217 | + | 420 | WP_222541783.1 | hypothetical protein | - |
| K5K89_RS28395 (K5K89_28395) | 10857..11285 | + | 429 | WP_222541784.1 | hypothetical protein | - |
| K5K89_RS28400 (K5K89_28400) | 11333..11845 | + | 513 | WP_219022110.1 | single-stranded DNA-binding protein | - |
| K5K89_RS28405 (K5K89_28405) | 12040..12867 | + | 828 | WP_219022099.1 | DUF932 domain-containing protein | - |
| K5K89_RS28410 (K5K89_28410) | 12922..13344 | + | 423 | WP_222541785.1 | hypothetical protein | - |
| K5K89_RS28415 (K5K89_28415) | 13368..13697 | + | 330 | WP_222541786.1 | TrfB-related DNA-binding protein | - |
| K5K89_RS28420 (K5K89_28420) | 13690..13962 | + | 273 | WP_222541787.1 | hypothetical protein | - |
| K5K89_RS28425 (K5K89_28425) | 14217..14486 | + | 270 | WP_219022095.1 | antirestriction protein ArdR | - |
| K5K89_RS28430 (K5K89_28430) | 15221..16024 | - | 804 | WP_219022094.1 | SprT-like domain-containing protein | - |
| K5K89_RS28435 (K5K89_28435) | 16163..16549 | - | 387 | WP_019694541.1 | hypothetical protein | - |
| K5K89_RS28440 (K5K89_28440) | 16553..17272 | - | 720 | WP_011475366.1 | StbB family protein | - |
| K5K89_RS28445 (K5K89_28445) | 17269..17724 | - | 456 | WP_222541788.1 | hypothetical protein | - |
| K5K89_RS28450 (K5K89_28450) | 18153..18545 | + | 393 | WP_261401117.1 | hypothetical protein | - |
| K5K89_RS28455 (K5K89_28455) | 18538..20094 | + | 1557 | WP_169882229.1 | type IV secretion system DNA-binding domain-containing protein | - |
| K5K89_RS28460 (K5K89_28460) | 20105..23041 | + | 2937 | WP_222541789.1 | RecBCD enzyme subunit RecD | Relaxase |
| K5K89_RS28465 (K5K89_28465) | 23117..23866 | + | 750 | WP_261401115.1 | hypothetical protein | - |
| K5K89_RS28470 (K5K89_28470) | 24189..24839 | - | 651 | WP_222541765.1 | hypothetical protein | - |
| K5K89_RS28475 (K5K89_28475) | 24887..25369 | - | 483 | WP_222541766.1 | hypothetical protein | - |
| K5K89_RS28480 (K5K89_28480) | 25384..25989 | - | 606 | WP_222541767.1 | Cardiolipin synthase A | VF |
| K5K89_RS28485 (K5K89_28485) | 25979..26308 | - | 330 | WP_219022087.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| K5K89_RS28490 (K5K89_28490) | 26338..27240 | - | 903 | WP_222541768.1 | hypothetical protein | VF |
| K5K89_RS28495 (K5K89_28495) | 27224..28252 | - | 1029 | WP_219022085.1 | hypothetical protein | VF |
| K5K89_RS28500 (K5K89_28500) | 28262..29545 | - | 1284 | WP_222541769.1 | hypothetical protein | VF |
| K5K89_RS28505 (K5K89_28505) | 29548..30339 | - | 792 | WP_219022083.1 | hypothetical protein | VF |
| K5K89_RS28510 (K5K89_28510) | 30365..31030 | - | 666 | WP_219022082.1 | type IV secretion system protein | - |
| K5K89_RS28515 (K5K89_28515) | 31034..31897 | - | 864 | WP_222541770.1 | type IV secretion system protein | - |
| K5K89_RS28520 (K5K89_28520) | 31885..32289 | - | 405 | WP_219022080.1 | hypothetical protein | - |
| K5K89_RS28525 (K5K89_28525) | 32282..32494 | - | 213 | WP_219022079.1 | hypothetical protein | - |
| K5K89_RS28530 (K5K89_28530) | 32522..33205 | - | 684 | WP_222541771.1 | type IV secretion system protein | - |
| K5K89_RS28535 (K5K89_28535) | 33205..35889 | - | 2685 | WP_257603924.1 | hypothetical protein | VF |
| K5K89_RS28540 (K5K89_28540) | 35876..36169 | - | 294 | WP_110973314.1 | VirB3 family type IV secretion system protein | - |
| K5K89_RS28545 (K5K89_28545) | 36173..36634 | - | 462 | WP_219022077.1 | TrbC/VirB2 family protein | - |
| K5K89_RS28550 (K5K89_28550) | 37573..38346 | + | 774 | WP_261401116.1 | hypothetical protein | VF |
| K5K89_RS28555 (K5K89_28555) | 38357..39274 | + | 918 | WP_222541772.1 | ParB/RepB/Spo0J family partition protein | - |
| K5K89_RS28560 (K5K89_28560) | 39271..39621 | + | 351 | WP_222541773.1 | TrfB-related DNA-binding protein | - |
| K5K89_RS28565 (K5K89_28565) | 39618..40118 | + | 501 | WP_222541774.1 | hypothetical protein | - |
| K5K89_RS28570 (K5K89_28570) | 40402..41031 | + | 630 | WP_219022072.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|