MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 86367 bp
Accession: NZ_CP081784 Location: 1..86367 Organism: Escherichia coli strain 0H26 Replicon: plasmid unnamed2
Accession: NZ_CP081784 Location: 1..86367 Organism: Escherichia coli strain 0H26 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O44_RS26165 (J6O44_26040) | 41..727 | + | 687 | WP_223596853.1 | site-specific integrase | - |
| J6O44_RS26170 (J6O44_26045) | 943..2493 | - | 1551 | WP_080402007.1 | SLC13 family permease | - |
| J6O44_RS26175 (J6O44_26050) | 2532..3530 | - | 999 | WP_059593788.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| J6O44_RS26180 (J6O44_26055) | 3553..4854 | - | 1302 | WP_059593790.1 | four-carbon acid sugar kinase family protein | - |
| J6O44_RS26185 (J6O44_26060) | 4887..5567 | - | 681 | WP_242658614.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| J6O44_RS26190 (J6O44_26065) | 5746..6744 | + | 999 | WP_059593794.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| J6O44_RS26195 (J6O44_26070) | 7201..7857 | + | 657 | WP_059593848.1 | MgtC/SapB family protein | - |
| J6O44_RS26200 (J6O44_26075) | 8055..8246 | - | 192 | WP_042313830.1 | hypothetical protein | - |
| J6O44_RS26205 (J6O44_26080) | 8757..9962 | + | 1206 | WP_059593797.1 | AAA family ATPase | - |
| J6O44_RS26210 (J6O44_26085) | 9962..10936 | + | 975 | WP_059593798.1 | ParB family protein | - |
| J6O44_RS26215 (J6O44_26090) | 11018..11200 | - | 183 | Protein_10 | DUF4113 domain-containing protein | - |
| J6O44_RS26220 (J6O44_26095) | 11204..11311 | + | 108 | Protein_11 | chromosome partitioning protein ParB | - |
| J6O44_RS26225 (J6O44_26100) | 11393..12667 | - | 1275 | WP_191221255.1 | Y-family DNA polymerase | - |
| J6O44_RS26230 (J6O44_26105) | 12667..13089 | - | 423 | WP_059593800.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| J6O44_RS26235 (J6O44_26110) | 13625..14560 | + | 936 | WP_059593802.1 | DUF1281 domain-containing protein | - |
| J6O44_RS26240 (J6O44_26115) | 14593..14940 | + | 348 | WP_059593804.1 | hypothetical protein | - |
| J6O44_RS26245 (J6O44_26120) | 15317..15997 | + | 681 | WP_058216376.1 | DNA methylase | - |
| J6O44_RS26250 (J6O44_26125) | 15997..16218 | + | 222 | WP_191221259.1 | hypothetical protein | - |
| J6O44_RS26255 (J6O44_26130) | 16229..16648 | + | 420 | WP_191221254.1 | DUF1380 family protein | - |
| J6O44_RS26260 (J6O44_26135) | 16704..17108 | + | 405 | WP_059593810.1 | DUF1380 family protein | - |
| J6O44_RS26265 (J6O44_26140) | 17176..17943 | + | 768 | WP_191221253.1 | hypothetical protein | - |
| J6O44_RS26270 (J6O44_26145) | 18361..18789 | + | 429 | WP_059593814.1 | antirestriction protein | - |
| J6O44_RS26275 (J6O44_26150) | 18856..19278 | + | 423 | WP_120773479.1 | DUF1380 family protein | - |
| J6O44_RS26280 (J6O44_26155) | 19322..19732 | + | 411 | WP_104652235.1 | DUF1380 domain-containing protein | - |
| J6O44_RS26285 (J6O44_26160) | 19746..19937 | + | 192 | WP_032934909.1 | hypothetical protein | - |
| J6O44_RS26290 (J6O44_26165) | 20106..20360 | + | 255 | WP_049040212.1 | DNA polymerase III subunit theta | - |
| J6O44_RS26295 | 20660..20808 | - | 149 | Protein_26 | hypothetical protein | - |
| J6O44_RS26300 (J6O44_26175) | 21112..21339 | + | 228 | WP_191221252.1 | hypothetical protein | - |
| J6O44_RS26305 (J6O44_26180) | 21433..21663 | + | 231 | WP_191221251.1 | hypothetical protein | - |
| J6O44_RS26310 (J6O44_26185) | 21715..23097 | + | 1383 | WP_191221250.1 | DUF3560 domain-containing protein | - |
| J6O44_RS26315 (J6O44_26190) | 23144..23707 | + | 564 | WP_191219947.1 | methyltransferase | - |
| J6O44_RS26320 (J6O44_26195) | 24486..24848 | + | 363 | WP_104652231.1 | hypothetical protein | - |
| J6O44_RS26325 (J6O44_26200) | 24934..25200 | + | 267 | WP_008324972.1 | hypothetical protein | - |
| J6O44_RS26330 (J6O44_26205) | 25217..26038 | + | 822 | WP_008324970.1 | DUF932 domain-containing protein | - |
| J6O44_RS26335 (J6O44_26210) | 26074..26604 | - | 531 | WP_191219944.1 | lytic transglycosylase domain-containing protein | - |
| J6O44_RS26340 (J6O44_26215) | 27270..27662 | + | 393 | WP_008324961.1 | relaxosome protein TraM | - |
| J6O44_RS26345 (J6O44_26220) | 27695..28336 | - | 642 | WP_191219943.1 | Arc family DNA-binding protein | - |
| J6O44_RS26350 (J6O44_26225) | 28533..28886 | + | 354 | WP_104652443.1 | type IV conjugative transfer system pilin TraA | - |
| J6O44_RS26355 (J6O44_26230) | 28889..29191 | + | 303 | WP_104652433.1 | type IV conjugative transfer system protein TraL | - |
| J6O44_RS26360 (J6O44_26235) | 29197..29781 | + | 585 | WP_008324957.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| J6O44_RS26365 (J6O44_26240) | 29793..30533 | + | 741 | WP_223584557.1 | type-F conjugative transfer system secretin TraK | - |
| J6O44_RS26370 (J6O44_26245) | 30530..31927 | + | 1398 | WP_104652431.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| J6O44_RS26375 (J6O44_26250) | 31936..32418 | + | 483 | WP_137366884.1 | hypothetical protein | - |
| J6O44_RS26380 (J6O44_26255) | 32415..32819 | + | 405 | WP_223584549.1 | hypothetical protein | - |
| J6O44_RS26385 (J6O44_26260) | 32880..33437 | + | 558 | WP_104652359.1 | type IV conjugative transfer system lipoprotein TraV | - |
| J6O44_RS26390 (J6O44_26265) | 33434..36037 | + | 2604 | WP_104652358.1 | type IV secretion system protein TraC | - |
| J6O44_RS26395 (J6O44_26270) | 36034..36450 | + | 417 | WP_008325088.1 | type-F conjugative transfer system protein TrbI | - |
| J6O44_RS26400 (J6O44_26275) | 36447..37082 | + | 636 | WP_104652357.1 | type-F conjugative transfer system protein TraW | - |
| J6O44_RS26405 (J6O44_26280) | 37079..37399 | + | 321 | WP_008325090.1 | hypothetical protein | - |
| J6O44_RS26410 (J6O44_26285) | 37474..38019 | + | 546 | WP_191226008.1 | hypothetical protein | - |
| J6O44_RS26415 (J6O44_26290) | 38127..38348 | + | 222 | WP_104652355.1 | hypothetical protein | - |
| J6O44_RS26420 (J6O44_26295) | 38404..38727 | + | 324 | WP_008325099.1 | hypothetical protein | - |
| J6O44_RS26425 (J6O44_26300) | 38724..39722 | + | 999 | WP_008325100.1 | conjugal transfer pilus assembly protein TraU | - |
| J6O44_RS26430 (J6O44_26305) | 39733..40353 | + | 621 | WP_008325101.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| J6O44_RS26435 (J6O44_26310) | 40350..42206 | + | 1857 | WP_223584544.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| J6O44_RS26440 (J6O44_26315) | 42203..42985 | + | 783 | WP_223584540.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| J6O44_RS26445 (J6O44_26320) | 42996..43445 | + | 450 | WP_137366881.1 | hypothetical protein | - |
| J6O44_RS26450 (J6O44_26325) | 43442..43669 | + | 228 | WP_008324899.1 | hypothetical protein | - |
| J6O44_RS26455 (J6O44_26330) | 43659..44258 | + | 600 | WP_008324897.1 | F-type conjugal transfer protein TrbB | - |
| J6O44_RS26460 (J6O44_26335) | 44276..44452 | + | 177 | WP_155398668.1 | hypothetical protein | - |
| J6O44_RS26465 (J6O44_26340) | 44445..45809 | + | 1365 | WP_104652350.1 | conjugal transfer pilus assembly protein TraH | - |
| J6O44_RS26470 (J6O44_26345) | 45809..49042 | + | 3234 | WP_191219939.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| J6O44_RS26475 (J6O44_26350) | 49051..49761 | + | 711 | WP_223584538.1 | hypothetical protein | - |
| J6O44_RS26480 (J6O44_26355) | 49908..50639 | + | 732 | WP_223584537.1 | conjugal transfer complement resistance protein TraT | - |
| J6O44_RS26485 (J6O44_26360) | 50646..50957 | - | 312 | WP_191219936.1 | CcdB family protein | - |
| J6O44_RS26490 (J6O44_26365) | 50954..51202 | - | 249 | WP_191219935.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| J6O44_RS26495 (J6O44_26370) | 51703..52854 | + | 1152 | WP_001254932.1 | IS30-like element IS30 family transposase | - |
| J6O44_RS26500 (J6O44_26375) | 52954..53262 | + | 309 | WP_193146064.1 | hypothetical protein | - |
| J6O44_RS26505 (J6O44_26380) | 53382..55913 | + | 2532 | WP_191226012.1 | type IV conjugative transfer system coupling protein TraD | - |
| J6O44_RS26510 (J6O44_26385) | 55910..61396 | + | 5487 | WP_191226010.1 | conjugative transfer relaxase/helicase TraI | - |
| J6O44_RS26515 (J6O44_26390) | 61433..62236 | + | 804 | WP_191219957.1 | DsbA family protein | - |
| J6O44_RS26520 (J6O44_26395) | 62325..62648 | + | 324 | WP_008324877.1 | hypothetical protein | - |
| J6O44_RS26525 (J6O44_26400) | 62681..63229 | + | 549 | WP_191219959.1 | DUF2726 domain-containing protein | - |
| J6O44_RS26530 (J6O44_26405) | 63754..63897 | - | 144 | WP_001767846.1 | hypothetical protein | - |
| J6O44_RS26535 (J6O44_26410) | 63933..66620 | - | 2688 | WP_223584562.1 | autotransporter domain-containing protein | - |
| J6O44_RS26540 (J6O44_26415) | 66630..69029 | - | 2400 | WP_223584561.1 | polysaccharide lyase 8 family protein | - |
| J6O44_RS26545 (J6O44_26420) | 69048..70052 | - | 1005 | WP_012291304.1 | hypothetical protein | - |
| J6O44_RS26550 (J6O44_26425) | 70097..71554 | - | 1458 | WP_052750737.1 | DUF2264 domain-containing protein | - |
| J6O44_RS26555 (J6O44_26430) | 71588..72622 | - | 1035 | WP_012291312.1 | glycoside hydrolase family 88 protein | - |
| J6O44_RS26560 (J6O44_26435) | 72702..73139 | - | 438 | WP_012291315.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| J6O44_RS26565 (J6O44_26440) | 73149..74015 | - | 867 | WP_023247564.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| J6O44_RS26570 (J6O44_26445) | 74005..74775 | - | 771 | WP_012291321.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| J6O44_RS26575 (J6O44_26450) | 74795..75268 | - | 474 | WP_023247562.1 | PTS sugar transporter subunit IIB | - |
| J6O44_RS26580 (J6O44_26455) | 75381..76169 | - | 789 | WP_012291328.1 | DeoR family transcriptional regulator | - |
| J6O44_RS26585 (J6O44_26460) | 76719..77741 | - | 1023 | WP_016246530.1 | IS110 family transposase | - |
| J6O44_RS26590 | 77855..77995 | - | 141 | Protein_85 | arsenical pump-driving ATPase | - |
| J6O44_RS26595 (J6O44_26470) | 78115..78687 | - | 573 | WP_001556711.1 | recombinase family protein | - |
| J6O44_RS26600 (J6O44_26475) | 78851..78991 | + | 141 | WP_160185462.1 | hypothetical protein | - |
| J6O44_RS26605 (J6O44_26480) | 79003..79707 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| J6O44_RS26610 (J6O44_26485) | 79759..80115 | + | 357 | Protein_89 | site-specific integrase | - |
| J6O44_RS26615 (J6O44_26490) | 80438..81427 | - | 990 | WP_191221256.1 | RepB family plasmid replication initiator protein | - |
| J6O44_RS26620 (J6O44_26495) | 82242..82511 | + | 270 | WP_048213818.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| J6O44_RS26625 (J6O44_26500) | 82515..83045 | + | 531 | WP_048213819.1 | GNAT family N-acetyltransferase | Toxin Detail |
| J6O44_RS26630 (J6O44_26505) | 83130..84134 | - | 1005 | WP_048213820.1 | hypothetical protein | - |
| J6O44_RS26635 (J6O44_26510) | 84139..84384 | - | 246 | WP_048213821.1 | hypothetical protein | - |
| J6O44_RS26640 (J6O44_26515) | 85380..85766 | + | 387 | WP_059593784.1 | hypothetical protein | - |
| J6O44_RS26645 (J6O44_26520) | 85778..86311 | + | 534 | WP_065212827.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|