MGE detailed information
MGE type: Genomic_island MGE length: 38362 bp
Accession: NZ_CP081774 Location: 3876172..3914533 Organism: Escherichia coli strain 0H24 Replicon: chromosome
Accession: NZ_CP081774 Location: 3876172..3914533 Organism: Escherichia coli strain 0H24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O11_RS18915 (3871829) | 3871829..3872254 | + | 426 | Protein_3710 | IS3 family transposase | - |
| J6O11_RS18920 (3872927) | 3872927..3874435 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| J6O11_RS18925 (3874516) | 3874516..3874695 | + | 180 | Protein_3712 | DDE-type integrase/transposase/recombinase | - |
| J6O11_RS18930 (3874977) | 3874977..3876053 | + | 1077 | WP_000227969.1 | IS110 family transposase | - |
| J6O11_RS18935 (3876070) | 3876070..3876378 | + | 309 | Protein_3714 | IS3 family transposase ISLad1 | Transposase |
| J6O11_RS18940 (3876276) | 3876276..3877574 | - | 1299 | WP_000342159.1 | IS256 family transposase ISSoEn2 | Transposase |
| J6O11_RS18945 (3877792) | 3877792..3877956 | - | 165 | Protein_3716 | transposase domain-containing protein | - |
| J6O11_RS18950 (3877901) | 3877901..3878164 | - | 264 | WP_001247776.1 | transposase | - |
| J6O11_RS18955 (3878179) | 3878179..3878442 | + | 264 | WP_001549018.1 | hypothetical protein | - |
| J6O11_RS18960 (3878671) | 3878671..3878952 | + | 282 | WP_000643628.1 | helix-turn-helix domain-containing protein | - |
| J6O11_RS18965 (3878987) | 3878987..3879556 | + | 570 | WP_000350435.1 | Small heat shock protein IbpA | VF |
| J6O11_RS18970 (3879662) | 3879662..3882544 | + | 2883 | WP_000101612.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | VF |
| J6O11_RS18975 (3882544) | 3882544..3882735 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| J6O11_RS18980 (3882796) | 3882796..3884523 | + | 1728 | WP_000412528.1 | FtsH/Yme1/Tma family ATP-dependent metallopeptidase | - |
| J6O11_RS18985 (3884611) | 3884611..3885069 | + | 459 | WP_001275372.1 | hypothetical protein | VF |
| J6O11_RS18990 (3885092) | 3885092..3886006 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| J6O11_RS18995 (3886109) | 3886109..3886996 | + | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| J6O11_RS19000 (3887086) | 3887086..3887697 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| J6O11_RS19005 (3887777) | 3887777..3888922 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| J6O11_RS19010 (3888912) | 3888912..3889352 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| J6O11_RS19015 (3889356) | 3889356..3891071 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| J6O11_RS19020 (3891068) | 3891068..3891565 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| J6O11_RS19025 (3891543) | 3891543..3892508 | + | 966 | WP_000196689.1 | zinc metalloprotease HtpX | - |
| J6O11_RS19030 (3892533) | 3892533..3893684 | + | 1152 | WP_000323729.1 | hypothetical protein | VF |
| J6O11_RS19035 (3893909) | 3893909..3894478 | - | 570 | Protein_3734 | IS5 family transposase ISPa16 | Transposase |
| J6O11_RS19040 (3895600) | 3895600..3896463 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| J6O11_RS19045 (3896555) | 3896555..3897376 | + | 822 | WP_000197388.1 | DUF932 domain-containing protein | - |
| J6O11_RS19050 (3897593) | 3897593..3898294 | + | 702 | WP_000189411.1 | WYL domain-containing protein | - |
| J6O11_RS19055 (3898335) | 3898335..3898571 | + | 237 | WP_001144031.1 | protein YpjK | - |
| J6O11_RS19060 (3898571) | 3898571..3899014 | + | 444 | WP_001547764.1 | lipoprotein YafY | - |
| J6O11_RS19065 (3899037) | 3899037..3899504 | + | 468 | WP_001547765.1 | protein YkfB | - |
| J6O11_RS19070 (3899580) | 3899580..3899819 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O11_RS19075 (3899917) | 3899917..3900375 | + | 459 | WP_001548150.1 | antirestriction protein | - |
| J6O11_RS19080 (3900391) | 3900391..3900867 | + | 477 | WP_000811693.1 | RadC family protein | - |
| J6O11_RS19085 (3900876) | 3900876..3901097 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O11_RS19090 (3901116) | 3901116..3901433 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O11_RS19095 (3901454) | 3901454..3901795 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| J6O11_RS19100 (3902616) | 3902616..3904082 | - | 1467 | WP_000723924.1 | hypothetical protein | - |
| J6O11_RS19105 (3904398) | 3904398..3904817 | - | 420 | WP_001333214.1 | hypothetical protein | - |
| J6O11_RS19110 (3905031) | 3905031..3905117 | - | 87 | Protein_3749 | capsid protein | - |
| J6O11_RS19115 (3905322) | 3905322..3906095 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| J6O11_RS19120 (3906156) | 3906156..3906710 | - | 555 | WP_000905043.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| J6O11_RS19125 (3906740) | 3906740..3907309 | + | 570 | WP_002431159.1 | hypothetical protein | - |
| J6O11_RS19130 (3907309) | 3907309..3907902 | + | 594 | WP_000613358.1 | tail fiber assembly protein | - |
| J6O11_RS19135 (3907874) | 3907874..3908317 | - | 444 | WP_000978831.1 | tail fiber assembly protein | - |
| J6O11_RS19140 (3908317) | 3908317..3908940 | - | 624 | WP_000554682.1 | hypothetical protein | - |
| J6O11_RS19145 (3908944) | 3908944..3909528 | - | 585 | WP_016243480.1 | YmfQ family protein | - |
| J6O11_RS19150 (3909519) | 3909519..3910577 | - | 1059 | WP_016243479.1 | baseplate J/gp47 family protein | - |
| J6O11_RS19155 (3910564) | 3910564..3910989 | - | 426 | WP_042027905.1 | phage GP46 family protein | - |
| J6O11_RS19160 (3910989) | 3910989..3911537 | - | 549 | WP_001542670.1 | phage baseplate assembly protein V | - |
| J6O11_RS19165 (3911537) | 3911537..3912616 | - | 1080 | WP_016243477.1 | phage tail protein | - |
| J6O11_RS19170 (3912613) | 3912613..3913941 | - | 1329 | WP_016243476.1 | DNA circularization N-terminal domain-containing protein | - |
| J6O11_RS19175 (3914003) | 3914003..3914533 | - | 531 | WP_000679479.1 | hypothetical protein | - |
| J6O11_RS19180 (3914625) | 3914625..3916457 | - | 1833 | WP_016243475.1 | phage tail tape measure protein | - |
| J6O11_RS19185 (3916599) | 3916599..3916868 | - | 270 | WP_000661051.1 | phage tail assembly protein | - |
| J6O11_RS19190 (3916868) | 3916868..3917224 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| J6O11_RS19195 (3917224) | 3917224..3918720 | - | 1497 | WP_001759749.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| J6O11_RS19200 (3918704) | 3918704..3918874 | - | 171 | WP_016243474.1 | DUF2635 domain-containing protein | - |
| J6O11_RS19205 (3918883) | 3918883..3919443 | - | 561 | WP_016243473.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|