MGE detailed information
MGE type: Genomic_island MGE length: 38363 bp
Accession: NZ_CP081767 Location: 3876172..3914534 Organism: Escherichia coli strain 0H18 Replicon: chromosome
Accession: NZ_CP081767 Location: 3876172..3914534 Organism: Escherichia coli strain 0H18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O59_RS18940 (3871829) | 3871829..3872254 | + | 426 | Protein_3715 | IS3 family transposase | - |
| J6O59_RS18945 (3872927) | 3872927..3874435 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| J6O59_RS18950 (3874516) | 3874516..3874695 | + | 180 | Protein_3717 | DDE-type integrase/transposase/recombinase | - |
| J6O59_RS18955 (3874977) | 3874977..3876053 | + | 1077 | WP_000227969.1 | IS110 family transposase | - |
| J6O59_RS18960 (3876070) | 3876070..3876378 | + | 309 | Protein_3719 | IS3 family transposase ISLad1 | Transposase |
| J6O59_RS18965 (3876276) | 3876276..3877574 | - | 1299 | WP_000342159.1 | IS256 family transposase ISSoEn2 | Transposase |
| J6O59_RS18970 (3877792) | 3877792..3877956 | - | 165 | Protein_3721 | transposase domain-containing protein | - |
| J6O59_RS18975 (3877901) | 3877901..3878164 | - | 264 | WP_001247776.1 | transposase | - |
| J6O59_RS18980 (3878179) | 3878179..3878442 | + | 264 | WP_001549018.1 | hypothetical protein | - |
| J6O59_RS18985 (3878671) | 3878671..3878952 | + | 282 | WP_000643628.1 | helix-turn-helix domain-containing protein | - |
| J6O59_RS18990 (3878987) | 3878987..3879556 | + | 570 | WP_000350435.1 | Spore protein SP21 | VF |
| J6O59_RS18995 (3879662) | 3879662..3882544 | + | 2883 | WP_000101612.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| J6O59_RS19000 (3882544) | 3882544..3882735 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| J6O59_RS19005 (3882796) | 3882796..3884523 | + | 1728 | WP_000412528.1 | FtsH/Yme1/Tma family ATP-dependent metallopeptidase | - |
| J6O59_RS19010 (3884611) | 3884611..3885069 | + | 459 | WP_001275372.1 | Spore protein SP21 | VF |
| J6O59_RS19015 (3885092) | 3885092..3886006 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| J6O59_RS19020 (3886109) | 3886109..3886996 | + | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| J6O59_RS19025 (3887086) | 3887086..3887697 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| J6O59_RS19030 (3887777) | 3887777..3888922 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| J6O59_RS19035 (3888912) | 3888912..3889352 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| J6O59_RS19040 (3889356) | 3889356..3891071 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| J6O59_RS19045 (3891068) | 3891068..3891565 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| J6O59_RS19050 (3891543) | 3891543..3892508 | + | 966 | WP_000196689.1 | zinc metalloprotease HtpX | - |
| J6O59_RS19055 (3892533) | 3892533..3893684 | + | 1152 | WP_000323729.1 | Putative serine protease HhoB | VF |
| J6O59_RS19060 (3893909) | 3893909..3894478 | - | 570 | Protein_3739 | IS5 family transposase ISPa16 | Transposase |
| J6O59_RS19065 (3895600) | 3895600..3896463 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| J6O59_RS19070 (3896555) | 3896555..3897376 | + | 822 | WP_000197388.1 | DUF932 domain-containing protein | - |
| J6O59_RS19075 (3897593) | 3897593..3898294 | + | 702 | WP_000189411.1 | WYL domain-containing protein | - |
| J6O59_RS19080 (3898335) | 3898335..3898571 | + | 237 | WP_001144031.1 | protein YpjK | - |
| J6O59_RS19085 (3898571) | 3898571..3899014 | + | 444 | WP_001547764.1 | lipoprotein YafY | - |
| J6O59_RS19090 (3899037) | 3899037..3899504 | + | 468 | WP_001547765.1 | protein YkfB | - |
| J6O59_RS19095 (3899581) | 3899581..3899820 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O59_RS19100 (3899918) | 3899918..3900376 | + | 459 | WP_001548150.1 | antirestriction protein | - |
| J6O59_RS19105 (3900392) | 3900392..3900868 | + | 477 | WP_000811693.1 | RadC family protein | - |
| J6O59_RS19110 (3900877) | 3900877..3901098 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O59_RS19115 (3901117) | 3901117..3901434 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O59_RS19120 (3901455) | 3901455..3901796 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| J6O59_RS19125 (3902617) | 3902617..3904083 | - | 1467 | WP_000723924.1 | hypothetical protein | - |
| J6O59_RS19130 (3904399) | 3904399..3904788 | - | 390 | WP_223596848.1 | hypothetical protein | - |
| J6O59_RS19135 (3905032) | 3905032..3905118 | - | 87 | Protein_3754 | capsid protein | - |
| J6O59_RS19140 (3905323) | 3905323..3906096 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| J6O59_RS19145 (3906157) | 3906157..3906711 | - | 555 | WP_000905043.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| J6O59_RS19150 (3906741) | 3906741..3907310 | + | 570 | WP_002431159.1 | hypothetical protein | - |
| J6O59_RS19155 (3907310) | 3907310..3907903 | + | 594 | WP_000613358.1 | tail fiber assembly protein | - |
| J6O59_RS19160 (3907875) | 3907875..3908318 | - | 444 | WP_000978831.1 | tail fiber assembly protein | - |
| J6O59_RS19165 (3908318) | 3908318..3908941 | - | 624 | WP_000554682.1 | hypothetical protein | - |
| J6O59_RS19170 (3908945) | 3908945..3909529 | - | 585 | WP_016243480.1 | YmfQ family protein | - |
| J6O59_RS19175 (3909520) | 3909520..3910578 | - | 1059 | WP_016243479.1 | baseplate J/gp47 family protein | - |
| J6O59_RS19180 (3910565) | 3910565..3910990 | - | 426 | WP_042027905.1 | phage GP46 family protein | - |
| J6O59_RS19185 (3910990) | 3910990..3911538 | - | 549 | WP_001542670.1 | phage baseplate assembly protein V | - |
| J6O59_RS19190 (3911538) | 3911538..3912617 | - | 1080 | WP_016243477.1 | phage tail protein | - |
| J6O59_RS19195 (3912614) | 3912614..3913942 | - | 1329 | WP_016243476.1 | DNA circularization N-terminal domain-containing protein | - |
| J6O59_RS19200 (3914004) | 3914004..3914534 | - | 531 | WP_000679479.1 | hypothetical protein | - |
| J6O59_RS19205 (3914626) | 3914626..3916458 | - | 1833 | WP_016243475.1 | phage tail tape measure protein | - |
| J6O59_RS19210 (3916600) | 3916600..3916869 | - | 270 | WP_000661051.1 | phage tail assembly protein | - |
| J6O59_RS19215 (3916869) | 3916869..3917225 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| J6O59_RS19220 (3917225) | 3917225..3918721 | - | 1497 | WP_001759749.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| J6O59_RS19225 (3918705) | 3918705..3918875 | - | 171 | WP_016243474.1 | DUF2635 domain-containing protein | - |
| J6O59_RS19230 (3918884) | 3918884..3919444 | - | 561 | WP_016243473.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|