MGE detailed information
MGE type: Prophage MGE length: 81958 bp
Accession: NZ_CP081767 Location: 1187568..1269525 Organism: Escherichia coli strain 0H18 Replicon: chromosome
Accession: NZ_CP081767 Location: 1187568..1269525 Organism: Escherichia coli strain 0H18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O59_RS05815 (1186219) | 1186219..1186842 | + | 624 | WP_016243807.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| J6O59_RS05820 (1186846) | 1186846..1187535 | + | 690 | WP_016243806.1 | hypothetical protein | - |
| J6O59_RS05825 (1187568) | 1187568..1188737 | - | 1170 | WP_016243805.1 | Putative defective protein IntQ ; Integrase | Integrase |
| J6O59_RS05830 (1188698) | 1188698..1188904 | - | 207 | WP_001331174.1 | hypothetical protein | - |
| J6O59_RS05835 (1188964) | 1188964..1189179 | - | 216 | WP_001331173.1 | hypothetical protein | - |
| J6O59_RS05840 (1189176) | 1189176..1189538 | - | 363 | WP_001222408.1 | phage protein | - |
| J6O59_RS05845 (1189529) | 1189529..1190065 | - | 537 | WP_000008202.1 | 5'-deoxynucleotidase | - |
| J6O59_RS05850 (1190193) | 1190193..1191017 | - | 825 | WP_000081294.1 | YfdQ family protein | - |
| J6O59_RS05855 (1191082) | 1191082..1191444 | - | 363 | WP_000135680.1 | protein YfdP | - |
| J6O59_RS05860 (1191459) | 1191459..1191769 | - | 311 | Protein_1146 | hypothetical protein | - |
| J6O59_RS05865 (1192045) | 1192045..1192320 | - | 276 | WP_021563905.1 | hypothetical protein | - |
| J6O59_RS05870 (1192527) | 1192527..1193153 | - | 627 | WP_000450737.1 | LexA family transcriptional regulator | - |
| J6O59_RS05875 (1193251) | 1193251..1193451 | + | 201 | WP_000205494.1 | Cro/CI family transcriptional regulator | - |
| J6O59_RS05880 (1193489) | 1193489..1194046 | + | 558 | WP_000515869.1 | protein YmfL | - |
| J6O59_RS05885 (1194222) | 1194222..1194401 | + | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| J6O59_RS05890 (1194391) | 1194391..1195332 | + | 942 | WP_000104954.1 | helix-turn-helix domain-containing protein | - |
| J6O59_RS05895 (1195329) | 1195329..1195823 | + | 495 | WP_077125183.1 | PerC family transcriptional regulator | - |
| J6O59_RS05900 (1195823) | 1195823..1196476 | + | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| J6O59_RS05905 (1196473) | 1196473..1196799 | + | 327 | WP_000210170.1 | LexA family transcriptional regulator | - |
| J6O59_RS05910 (1196796) | 1196796..1197185 | + | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| J6O59_RS05915 (1197205) | 1197205..1198014 | + | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| J6O59_RS05920 (1198022) | 1198022..1199011 | + | 990 | WP_061157959.1 | DUF968 domain-containing protein | - |
| J6O59_RS05925 (1199029) | 1199029..1199370 | + | 342 | WP_001205460.1 | antiterminator Q family protein | - |
| J6O59_RS05930 (1199383) | 1199383..1199931 | - | 549 | WP_001131905.1 | hypothetical protein | - |
| J6O59_RS05935 (1199918) | 1199918..1200844 | - | 927 | WP_000868396.1 | hypothetical protein | - |
| J6O59_RS05940 (1201025) | 1201025..1201312 | + | 288 | WP_223276187.1 | hypothetical protein | - |
| J6O59_RS05945 (1201463) | 1201463..1202515 | + | 1053 | WP_016243801.1 | site-specific DNA-methyltransferase | - |
| J6O59_RS05950 (1202583) | 1202583..1202798 | + | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| J6O59_RS05955 (1202798) | 1202798..1203295 | + | 498 | WP_001135250.1 | lysozyme RrrD | - |
| J6O59_RS27125 (1203292) | 1203292..1203759 | + | 468 | WP_016243800.1 | lysis protein | - |
| J6O59_RS05970 (1203747) | 1203747..1203899 | + | 153 | WP_001139675.1 | hypothetical protein | - |
| J6O59_RS05975 (1204041) | 1204041..1204217 | - | 177 | WP_001205130.1 | hypothetical protein | - |
| J6O59_RS05980 (1204575) | 1204575..1205069 | + | 495 | WP_000373425.1 | DUF1441 family protein | - |
| J6O59_RS05985 (1205069) | 1205069..1207171 | + | 2103 | WP_023307630.1 | phage terminase large subunit family protein | - |
| J6O59_RS05990 (1207168) | 1207168..1207380 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| J6O59_RS05995 (1207380) | 1207380..1208888 | + | 1509 | WP_016243798.1 | phage portal protein | - |
| J6O59_RS06000 (1208833) | 1208833..1210860 | + | 2028 | WP_016243797.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| J6O59_RS06005 (1210947) | 1210947..1211270 | + | 324 | WP_001097050.1 | DUF2190 family protein | - |
| J6O59_RS06010 (1211263) | 1211263..1211538 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| J6O59_RS06015 (1211550) | 1211550..1212128 | + | 579 | WP_000677102.1 | phage tail protein | - |
| J6O59_RS06020 (1212125) | 1212125..1212526 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| J6O59_RS06025 (1212537) | 1212537..1213280 | + | 744 | WP_000211129.1 | phage tail protein | - |
| J6O59_RS06030 (1213341) | 1213341..1213727 | + | 387 | WP_001300035.1 | phage minor tail protein G | - |
| J6O59_RS06035 (1213736) | 1213736..1214065 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| J6O59_RS06040 (1214037) | 1214037..1217102 | + | 3066 | WP_052994248.1 | phage tail tape measure protein | - |
| J6O59_RS06045 (1217102) | 1217102..1217431 | + | 330 | WP_000447253.1 | phage tail protein | - |
| J6O59_RS06050 (1217441) | 1217441..1218139 | + | 699 | WP_104457560.1 | phage minor tail protein L | - |
| J6O59_RS06055 (1218145) | 1218145..1218888 | + | 744 | WP_223584383.1 | C40 family peptidase | - |
| J6O59_RS06060 (1218786) | 1218786..1219433 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| J6O59_RS06065 (1219494) | 1219494..1222991 | + | 3498 | WP_016243793.1 | host specificity protein J | - |
| J6O59_RS06070 (1223062) | 1223062..1223661 | + | 600 | WP_001233071.1 | Outer membrane protein X | VF |
| J6O59_RS06075 (1223726) | 1223726..1226686 | + | 2961 | WP_000279163.1 | phage tail protein | - |
| J6O59_RS06080 (1226686) | 1226686..1227270 | + | 585 | WP_016243792.1 | tail fiber assembly protein | - |
| J6O59_RS06085 (1227340) | 1227340..1228113 | - | 774 | WP_000355482.1 | hypothetical protein | - |
| J6O59_RS06090 (1228520) | 1228520..1229953 | + | 1434 | WP_001288444.1 | DNA cytosine methyltransferase | - |
| J6O59_RS06095 (1229988) | 1229988..1231202 | - | 1215 | WP_012602456.1 | type II restriction endonuclease | - |
| J6O59_RS06100 (1231632) | 1231632..1231961 | - | 330 | WP_016243791.1 | TA system toxin CbtA family protein | Toxin Detail |
| J6O59_RS06105 (1231982) | 1231982..1232302 | - | 321 | WP_016243790.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| J6O59_RS06110 (1232320) | 1232320..1232541 | - | 222 | WP_016243789.1 | DUF987 domain-containing protein | - |
| J6O59_RS06115 (1232550) | 1232550..1233032 | - | 483 | WP_016243788.1 | DNA repair protein RadC | - |
| J6O59_RS06120 (1233041) | 1233041..1233499 | - | 459 | WP_016243787.1 | antirestriction protein | - |
| J6O59_RS06125 (1233662) | 1233662..1233753 | - | 92 | Protein_1198 | DUF905 domain-containing protein | - |
| J6O59_RS06130 (1233987) | 1233987..1234723 | + | 737 | Protein_1199 | IS3 family transposase IS629 | Transposase |
| J6O59_RS06135 (1235396) | 1235396..1236904 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| J6O59_RS06140 (1236988) | 1236988..1237467 | + | 480 | Protein_1201 | IS3 family transposase ISEc25 | Transposase |
| J6O59_RS06145 (1237698) | 1237698..1238138 | - | 441 | WP_016243785.1 | hypothetical protein | - |
| J6O59_RS06150 (1238484) | 1238484..1240106 | + | 1623 | WP_016243784.1 | hypothetical protein | - |
| J6O59_RS06155 (1240728) | 1240728..1241195 | - | 468 | WP_016243783.1 | protein YfjT | - |
| J6O59_RS06160 (1241219) | 1241219..1241662 | - | 444 | WP_016243782.1 | hypothetical protein | - |
| J6O59_RS06165 (1241652) | 1241652..1241897 | - | 246 | WP_016243781.1 | protein YpjK | - |
| J6O59_RS06170 (1241938) | 1241938..1242639 | - | 702 | WP_016243780.1 | WYL domain-containing protein | - |
| J6O59_RS06175 (1242856) | 1242856..1243677 | - | 822 | WP_016243779.1 | DUF932 domain-containing protein | - |
| J6O59_RS06180 (1243769) | 1243769..1244632 | - | 864 | WP_016243778.1 | GTPase family protein | - |
| J6O59_RS06185 (1245060) | 1245060..1245965 | + | 906 | WP_016243777.1 | WYL domain-containing protein | - |
| J6O59_RS06190 (1245965) | 1245965..1249243 | + | 3279 | WP_016243776.1 | helicase-related protein | - |
| J6O59_RS06195 (1249240) | 1249240..1249941 | + | 702 | WP_115186673.1 | DUF4391 domain-containing protein | - |
| J6O59_RS06200 (1249938) | 1249938..1252640 | + | 2703 | WP_115186674.1 | ATP-binding domain-containing protein | - |
| J6O59_RS06205 (1252715) | 1252715..1253407 | + | 693 | WP_223584384.1 | site-specific DNA-methyltransferase | - |
| J6O59_RS06210 (1253364) | 1253364..1254515 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| J6O59_RS06215 (1254529) | 1254529..1255908 | + | 1380 | WP_223584481.1 | DNA methyltransferase | - |
| J6O59_RS06220 (1255919) | 1255919..1258990 | + | 3072 | WP_115186676.1 | DEAD/DEAH box helicase family protein | - |
| J6O59_RS06225 (1259310) | 1259310..1261961 | + | 2652 | WP_115186677.1 | AAA family ATPase | - |
| J6O59_RS06230 (1261982) | 1261982..1262179 | + | 198 | WP_016243766.1 | ATP-binding protein | - |
| J6O59_RS06235 (1262183) | 1262183..1262863 | + | 681 | WP_016243765.1 | ATP-binding protein | - |
| J6O59_RS06240 (1262951) | 1262951..1263214 | + | 264 | WP_223584385.1 | ATP-binding protein | - |
| J6O59_RS06245 (1263291) | 1263291..1263911 | - | 621 | WP_016243764.1 | inovirus Gp2 family protein | - |
| J6O59_RS06250 (1264140) | 1264140..1265368 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| J6O59_RS06255 (1265490) | 1265490..1266887 | - | 1398 | WP_024191360.1 | YfjI family protein | - |
| J6O59_RS06260 (1267010) | 1267010..1267222 | - | 213 | WP_001549567.1 | AlpA family transcriptional regulator | - |
| J6O59_RS06265 (1267348) | 1267348..1268226 | + | 879 | WP_016243762.1 | hypothetical protein | - |
| J6O59_RS06270 (1268284) | 1268284..1269525 | - | 1242 | WP_016243761.1 | Prophage integrase IntA ; Integrase | Integrase |
| J6O59_RS06280 (1270306) | 1270306..1270788 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| J6O59_RS06285 (1270959) | 1270959..1271396 | + | 438 | WP_001341638.1 | type II toxin-antitoxin system toxin RatA | - |
| J6O59_RS06290 (1271386) | 1271386..1271676 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| J6O59_RS06295 (1271738) | 1271738..1272079 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| J6O59_RS06300 (1272228) | 1272228..1273889 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|