MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 46678 bp
Accession: NZ_CP081762 Location: 1118518..1165195 Organism: Escherichia coli strain CX21 Replicon: chromosome
Accession: NZ_CP081762 Location: 1118518..1165195 Organism: Escherichia coli strain CX21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O46_RS05450 (1114460) | 1114460..1115824 | - | 1365 | WP_000104466.1 | GntP family transporter | - |
| J6O46_RS05455 (1115913) | 1115913..1116689 | - | 777 | WP_001136936.1 | HPr family phosphocarrier protein | - |
| J6O46_RS05460 (1116694) | 1116694..1117332 | - | 639 | WP_001278994.1 | aldolase | - |
| J6O46_RS05465 (1117329) | 1117329..1118591 | - | 1263 | Protein_1074 | four-carbon acid sugar kinase family protein | - |
| J6O46_RS05470 (1118588) | 1118588..1119496 | - | 909 | WP_000847985.1 | NAD(P)-dependent oxidoreductase | - |
| J6O46_RS05475 (1119692) | 1119692..1120459 | + | 768 | WP_001300386.1 | DNA-binding transcriptional repressor YgbI | - |
| J6O46_RS05480 (1120510) | 1120510..1121166 | - | 657 | WP_001141341.1 | protein-serine/threonine phosphatase | - |
| J6O46_RS05485 (1121272) | 1121272..1123839 | - | 2568 | WP_089683204.1 | DNA mismatch repair protein MutS | - |
| J6O46_RS05490 (1123999) | 1123999..1125453 | + | 1455 | WP_001530776.1 | hypothetical protein | - |
| J6O46_RS05495 (1125465) | 1125465..1126040 | + | 576 | WP_004114867.1 | hypothetical protein | - |
| J6O46_RS05500 (1126130) | 1126130..1126696 | - | 567 | WP_016239675.1 | helix-turn-helix domain-containing protein | - |
| J6O46_RS05505 (1127679) | 1127679..1128104 | + | 426 | WP_004114857.1 | hypothetical protein | - |
| J6O46_RS05510 (1128250) | 1128250..1128570 | - | 321 | WP_000860569.1 | hypothetical protein | - |
| J6O46_RS05515 (1128597) | 1128597..1128983 | - | 387 | WP_223610843.1 | hypothetical protein | - |
| J6O46_RS05520 (1129032) | 1129032..1129304 | - | 273 | WP_004114852.1 | hypothetical protein | - |
| J6O46_RS05525 (1129494) | 1129494..1130711 | - | 1218 | WP_147690689.1 | relaxase/mobilization nuclease domain-containing protein | - |
| J6O46_RS05530 (1130708) | 1130708..1131112 | - | 405 | WP_147690690.1 | ATP-binding protein | - |
| J6O46_RS05535 (1131289) | 1131289..1132233 | - | 945 | WP_023294352.1 | ankyrin repeat domain-containing protein | - |
| J6O46_RS05540 (1132249) | 1132249..1132689 | - | 441 | WP_016246254.1 | hypothetical protein | - |
| J6O46_RS05545 (1133046) | 1133046..1134032 | - | 987 | WP_147690691.1 | ankyrin repeat domain-containing protein | - |
| J6O46_RS05550 (1134552) | 1134552..1135207 | + | 656 | WP_223610844.1 | IS1 family transposase | - |
| J6O46_RS05555 (1135236) | 1135236..1135933 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| J6O46_RS05560 (1136039) | 1136039..1139278 | - | 3240 | WP_062921026.1 | type I restriction endonuclease subunit R | - |
| J6O46_RS05565 (1139337) | 1139337..1140581 | - | 1245 | WP_137578622.1 | restriction endonuclease subunit S | - |
| J6O46_RS05570 (1140578) | 1140578..1142125 | - | 1548 | WP_097337720.1 | class I SAM-dependent DNA methyltransferase | - |
| J6O46_RS05575 (1142382) | 1142382..1142606 | + | 225 | Protein_1096 | integrase core domain-containing protein | - |
| J6O46_RS05580 (1143342) | 1143342..1145462 | + | 2121 | WP_097365576.1 | AAA family ATPase | - |
| J6O46_RS05585 (1145464) | 1145464..1147215 | + | 1752 | WP_223610845.1 | ATP-dependent helicase | - |
| J6O46_RS05590 (1147333) | 1147333..1147563 | + | 231 | WP_097365577.1 | hypothetical protein | - |
| J6O46_RS05595 (1147669) | 1147669..1148103 | + | 435 | Protein_1100 | IS3 family transposase ISKpn20 | Transposase |
| J6O46_RS05600 (1148630) | 1148630..1148764 | + | 135 | WP_000611926.1 | hypothetical protein | - |
| J6O46_RS05605 (1148841) | 1148841..1149194 | + | 354 | WP_000015499.1 | nitrous oxide-stimulated promoter family protein | - |
| J6O46_RS05610 (1149231) | 1149231..1151309 | - | 2079 | WP_001297144.1 | Formate hydrogenlyase transcriptional activator FhlA | VF |
| J6O46_RS05615 (1151383) | 1151383..1152393 | - | 1011 | WP_001059936.1 | hydrogenase maturation carbamoyl dehydratase HypE | - |
| J6O46_RS05620 (1152390) | 1152390..1153511 | - | 1122 | WP_001212982.1 | hydrogenase formation protein HypD | - |
| J6O46_RS05625 (1153511) | 1153511..1153783 | - | 273 | WP_000334881.1 | hydrogenase 3 maturation protein HypC | - |
| J6O46_RS05630 (1153774) | 1153774..1154646 | - | 873 | WP_000337665.1 | hydrogenase nickel incorporation protein HypB | - |
| J6O46_RS05635 (1154650) | 1154650..1155000 | - | 351 | WP_001299100.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| J6O46_RS05640 (1155212) | 1155212..1155673 | + | 462 | WP_000158056.1 | formate hydrogenlyase regulator HycA | - |
| J6O46_RS05645 (1155798) | 1155798..1156409 | + | 612 | WP_001079186.1 | formate hydrogenlyase subunit HycB | - |
| J6O46_RS05650 (1156406) | 1156406..1158232 | + | 1827 | WP_001274388.1 | formate hydrogenlyase subunit 3 | - |
| J6O46_RS05655 (1158235) | 1158235..1159158 | + | 924 | WP_000115200.1 | formate hydrogenlyase subunit HycD | - |
| J6O46_RS05660 (1159176) | 1159176..1160885 | + | 1710 | WP_001288140.1 | formate hydrogenlyase subunit HycE | - |
| J6O46_RS05665 (1160895) | 1160895..1161437 | + | 543 | WP_000493792.1 | formate hydrogenlyase subunit HycF | - |
| J6O46_RS05670 (1161437) | 1161437..1162204 | + | 768 | WP_000067401.1 | formate hydrogenlyase subunit HycG | - |
| J6O46_RS05675 (1162201) | 1162201..1162611 | + | 411 | WP_001291918.1 | formate hydrogenlyase assembly protein HycH | - |
| J6O46_RS05680 (1162604) | 1162604..1163074 | + | 471 | WP_000132961.1 | hydrogenase maturation peptidase HycI | - |
| J6O46_RS05685 (1163099) | 1163099..1163860 | + | 762 | WP_001026446.1 | hypothetical protein | - |
| J6O46_RS05690 (1164034) | 1164034..1164345 | + | 312 | WP_000547564.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| J6O46_RS05695 (1164342) | 1164342..1164761 | + | 420 | WP_000126294.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| J6O46_RS05700 (1164875) | 1164875..1166299 | - | 1425 | WP_000110363.1 | 6-phospho-beta-glucosidase AscB | - |
| J6O46_RS05705 (1166308) | 1166308..1167765 | - | 1458 | WP_001107882.1 | PTS cellobiose/arbutin/salicin transporter subunit IIBC | - |
| J6O46_RS05710 (1168025) | 1168025..1169035 | + | 1011 | WP_001402444.1 | DNA-binding transcriptional regulator AscG | - |
| J6O46_RS05715 (1169184) | 1169184..1169711 | + | 528 | WP_001078777.1 | electron transport protein HydN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|