MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 18368 bp
Accession: NZ_CP081745 Location: 1..18368 Organism: Escherichia coli strain CX15 Replicon: plasmid unnamed5
Accession: NZ_CP081745 Location: 1..18368 Organism: Escherichia coli strain CX15 Replicon: plasmid unnamed5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O52_RS25520 (J6O52_25435) | 1..1311 | + | 1311 | Protein_0 | DNA circularization N-terminal domain-containing protein | - |
| J6O52_RS25525 | 1308..2386 | + | 1079 | Protein_1 | baseplate protein | - |
| J6O52_RS25530 (J6O52_25455) | 2386..2934 | + | 549 | WP_001542670.1 | phage baseplate assembly protein V | - |
| J6O52_RS25535 (J6O52_25460) | 2934..3359 | + | 426 | WP_042027905.1 | phage GP46 family protein | - |
| J6O52_RS25540 (J6O52_25465) | 3346..4404 | + | 1059 | WP_016243479.1 | baseplate J/gp47 family protein | - |
| J6O52_RS25545 (J6O52_25470) | 4395..4979 | + | 585 | WP_016243480.1 | YmfQ family protein | - |
| J6O52_RS25550 (J6O52_25475) | 4983..5390 | + | 408 | Protein_6 | hypothetical protein | - |
| J6O52_RS25555 (J6O52_25480) | 5605..6048 | + | 444 | WP_000978831.1 | tail fiber assembly protein | - |
| J6O52_RS25560 (J6O52_25485) | 6020..6613 | - | 594 | WP_000613358.1 | tail fiber assembly protein | - |
| J6O52_RS25565 (J6O52_25490) | 6613..7182 | - | 570 | WP_002431159.1 | hypothetical protein | - |
| J6O52_RS25570 (J6O52_25495) | 7212..7766 | + | 555 | WP_000905043.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| J6O52_RS25575 (J6O52_25500) | 7827..8599 | - | 773 | Protein_11 | hypothetical protein | - |
| J6O52_RS25580 | 8804..8890 | + | 87 | Protein_12 | capsid protein | - |
| J6O52_RS25585 (J6O52_25505) | 9134..9523 | + | 390 | WP_223596848.1 | hypothetical protein | - |
| J6O52_RS25590 (J6O52_25510) | 9839..11305 | + | 1467 | WP_000723924.1 | hypothetical protein | - |
| J6O52_RS25595 (J6O52_25515) | 12124..12465 | - | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| J6O52_RS25600 (J6O52_25520) | 12486..12803 | - | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O52_RS25605 (J6O52_25525) | 12822..13043 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O52_RS25610 (J6O52_25530) | 13052..13529 | - | 478 | Protein_18 | RadC family protein | - |
| J6O52_RS25615 (J6O52_25535) | 13545..14003 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| J6O52_RS25620 (J6O52_25540) | 14101..14340 | - | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O52_RS25625 (J6O52_25545) | 14418..14885 | - | 468 | WP_001385283.1 | protein YkfB | - |
| J6O52_RS25630 (J6O52_25550) | 14908..15351 | - | 444 | WP_223617416.1 | hypothetical protein | - |
| J6O52_RS25635 (J6O52_25555) | 15351..15587 | - | 237 | WP_001144031.1 | protein YpjK | - |
| J6O52_RS25640 (J6O52_25560) | 15628..16329 | - | 702 | Protein_24 | WYL domain-containing protein | - |
| J6O52_RS25645 (J6O52_25565) | 16548..17365 | - | 818 | Protein_25 | DUF945 domain-containing protein | - |
| J6O52_RS25650 (J6O52_25570) | 17457..18320 | - | 864 | Protein_26 | GTPase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|