MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 46678 bp
Accession: NZ_CP081724 Location: 1118516..1165193 Organism: Escherichia coli strain CX07 Replicon: chromosome
Accession: NZ_CP081724 Location: 1118516..1165193 Organism: Escherichia coli strain CX07 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O12_RS05460 (1114458) | 1114458..1115822 | - | 1365 | WP_000104466.1 | GntP family transporter | - |
| J6O12_RS05465 (1115911) | 1115911..1116687 | - | 777 | WP_001136936.1 | HPr family phosphocarrier protein | - |
| J6O12_RS05470 (1116692) | 1116692..1117330 | - | 639 | WP_001278994.1 | aldolase | - |
| J6O12_RS05475 (1117327) | 1117327..1118589 | - | 1263 | Protein_1076 | four-carbon acid sugar kinase family protein | - |
| J6O12_RS05480 (1118586) | 1118586..1119494 | - | 909 | WP_000847985.1 | NAD(P)-dependent oxidoreductase | - |
| J6O12_RS05485 (1119690) | 1119690..1120457 | + | 768 | WP_001300386.1 | DNA-binding transcriptional repressor YgbI | - |
| J6O12_RS05490 (1120508) | 1120508..1121164 | - | 657 | WP_001141341.1 | protein-serine/threonine phosphatase | - |
| J6O12_RS05495 (1121270) | 1121270..1123837 | - | 2568 | WP_089683204.1 | DNA mismatch repair protein MutS | - |
| J6O12_RS05500 (1123997) | 1123997..1125451 | + | 1455 | WP_001530776.1 | hypothetical protein | - |
| J6O12_RS05505 (1125463) | 1125463..1126038 | + | 576 | WP_004114867.1 | hypothetical protein | - |
| J6O12_RS05510 (1126128) | 1126128..1126694 | - | 567 | WP_016239675.1 | helix-turn-helix domain-containing protein | - |
| J6O12_RS05515 (1127677) | 1127677..1128102 | + | 426 | WP_004114857.1 | hypothetical protein | - |
| J6O12_RS05520 (1128248) | 1128248..1128568 | - | 321 | WP_000860569.1 | hypothetical protein | - |
| J6O12_RS05525 (1128595) | 1128595..1128981 | - | 387 | WP_223610843.1 | hypothetical protein | - |
| J6O12_RS05530 (1129030) | 1129030..1129302 | - | 273 | WP_004114852.1 | hypothetical protein | - |
| J6O12_RS05535 (1129492) | 1129492..1130709 | - | 1218 | WP_147690689.1 | relaxase/mobilization nuclease domain-containing protein | - |
| J6O12_RS05540 (1130706) | 1130706..1131110 | - | 405 | WP_147690690.1 | ATP-binding protein | - |
| J6O12_RS05545 (1131287) | 1131287..1132231 | - | 945 | WP_023294352.1 | ankyrin repeat domain-containing protein | - |
| J6O12_RS05550 (1132247) | 1132247..1132687 | - | 441 | WP_016246254.1 | hypothetical protein | - |
| J6O12_RS05555 (1133044) | 1133044..1134030 | - | 987 | WP_147690691.1 | ankyrin repeat domain-containing protein | - |
| J6O12_RS05560 (1134550) | 1134550..1135205 | + | 656 | WP_223610844.1 | IS1 family transposase | - |
| J6O12_RS05565 (1135234) | 1135234..1135931 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| J6O12_RS05570 (1136037) | 1136037..1139276 | - | 3240 | WP_062921026.1 | type I restriction endonuclease subunit R | - |
| J6O12_RS05575 (1139335) | 1139335..1140579 | - | 1245 | WP_137578622.1 | restriction endonuclease subunit S | - |
| J6O12_RS05580 (1140576) | 1140576..1142123 | - | 1548 | WP_097337720.1 | class I SAM-dependent DNA methyltransferase | - |
| J6O12_RS05585 (1142380) | 1142380..1142604 | + | 225 | Protein_1098 | integrase core domain-containing protein | - |
| J6O12_RS05590 (1143340) | 1143340..1145460 | + | 2121 | WP_097365576.1 | AAA family ATPase | - |
| J6O12_RS05595 (1145462) | 1145462..1147213 | + | 1752 | WP_223610845.1 | ATP-dependent helicase | - |
| J6O12_RS05600 (1147331) | 1147331..1147561 | + | 231 | WP_097365577.1 | hypothetical protein | - |
| J6O12_RS05605 (1147667) | 1147667..1148101 | + | 435 | Protein_1102 | integrase core domain-containing protein | - |
| J6O12_RS05610 (1148628) | 1148628..1148762 | + | 135 | WP_000611926.1 | hypothetical protein | - |
| J6O12_RS05615 (1148839) | 1148839..1149192 | + | 354 | WP_000015499.1 | nitrous oxide-stimulated promoter family protein | - |
| J6O12_RS05620 (1149229) | 1149229..1151307 | - | 2079 | WP_001297144.1 | formate hydrogenlyase transcriptional activator FlhA | - |
| J6O12_RS05625 (1151381) | 1151381..1152391 | - | 1011 | WP_001059936.1 | hydrogenase maturation carbamoyl dehydratase HypE | - |
| J6O12_RS05630 (1152388) | 1152388..1153509 | - | 1122 | WP_001212982.1 | hydrogenase formation protein HypD | - |
| J6O12_RS05635 (1153509) | 1153509..1153781 | - | 273 | WP_000334881.1 | hydrogenase 3 maturation protein HypC | - |
| J6O12_RS05640 (1153772) | 1153772..1154644 | - | 873 | WP_000337665.1 | hydrogenase nickel incorporation protein HypB | - |
| J6O12_RS05645 (1154648) | 1154648..1154998 | - | 351 | WP_001299100.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| J6O12_RS05650 (1155210) | 1155210..1155671 | + | 462 | WP_000158056.1 | formate hydrogenlyase regulator HycA | - |
| J6O12_RS05655 (1155796) | 1155796..1156407 | + | 612 | WP_001079186.1 | formate hydrogenlyase subunit HycB | - |
| J6O12_RS05660 (1156404) | 1156404..1158230 | + | 1827 | WP_001274388.1 | formate hydrogenlyase subunit 3 | - |
| J6O12_RS05665 (1158233) | 1158233..1159156 | + | 924 | WP_000115200.1 | formate hydrogenlyase subunit HycD | - |
| J6O12_RS05670 (1159174) | 1159174..1160883 | + | 1710 | WP_001288140.1 | formate hydrogenlyase subunit HycE | - |
| J6O12_RS05675 (1160893) | 1160893..1161435 | + | 543 | WP_000493792.1 | formate hydrogenlyase subunit HycF | - |
| J6O12_RS05680 (1161435) | 1161435..1162202 | + | 768 | WP_000067401.1 | formate hydrogenlyase subunit HycG | - |
| J6O12_RS05685 (1162199) | 1162199..1162609 | + | 411 | WP_001291918.1 | formate hydrogenlyase assembly protein HycH | - |
| J6O12_RS05690 (1162602) | 1162602..1163072 | + | 471 | WP_000132961.1 | hydrogenase maturation peptidase HycI | - |
| J6O12_RS05695 (1163097) | 1163097..1163858 | + | 762 | WP_001026446.1 | hypothetical protein | - |
| J6O12_RS05700 (1164032) | 1164032..1164343 | + | 312 | WP_000547564.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| J6O12_RS05705 (1164340) | 1164340..1164759 | + | 420 | WP_000126294.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| J6O12_RS05710 (1164873) | 1164873..1166297 | - | 1425 | WP_000110363.1 | 6-phospho-beta-glucosidase AscB | - |
| J6O12_RS05715 (1166306) | 1166306..1167763 | - | 1458 | WP_001107882.1 | PTS cellobiose/arbutin/salicin transporter subunit IIBC | - |
| J6O12_RS05720 (1168023) | 1168023..1169033 | + | 1011 | WP_001402444.1 | DNA-binding transcriptional regulator AscG | - |
| J6O12_RS05725 (1169182) | 1169182..1169709 | + | 528 | WP_001078777.1 | electron transport protein HydN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|