MGE detailed information
MGE type: Genomic_island MGE length: 26806 bp
Accession: NZ_CP081719 Location: 4409821..4436626 Organism: Escherichia coli strain CX05 Replicon: chromosome
Accession: NZ_CP081719 Location: 4409821..4436626 Organism: Escherichia coli strain CX05 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O38_RS21595 (4406263) | 4406263..4406982 | + | 720 | WP_001102105.1 | (Fe-S)-binding protein | - |
| J6O38_RS21600 (4406993) | 4406993..4408420 | + | 1428 | WP_001547749.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| J6O38_RS21605 (4408413) | 4408413..4409108 | + | 696 | WP_000370411.1 | lactate utilization protein C | - |
| J6O38_RS21610 (4409158) | 4409158..4409571 | - | 414 | Protein_4236 | gluconate permease | - |
| J6O38_RS21615 (4409821) | 4409821..4410801 | + | 981 | WP_001547750.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O38_RS21620 (4410950) | 4410950..4411642 | + | 693 | Protein_4238 | Tyrosine-protein kinase etk | VF |
| J6O38_RS21625 (4411762) | 4411762..4413060 | - | 1299 | WP_016239723.1 | bifunctional acid phosphatase/4-phytase | - |
| J6O38_RS21630 (4413140) | 4413140..4413232 | - | 93 | WP_000270305.1 | cytochrome bd-II oxidase subunit CbdX | - |
| J6O38_RS21635 (4413245) | 4413245..4414381 | - | 1137 | WP_000460803.1 | cytochrome d ubiquinol oxidase subunit II | - |
| J6O38_RS21640 (4414393) | 4414393..4415352 | - | 960 | Protein_4242 | cytochrome ubiquinol oxidase subunit I | - |
| J6O38_RS21650 (4415890) | 4415890..4416501 | - | 612 | WP_001547754.1 | inovirus Gp2 family protein | - |
| J6O38_RS21655 (4416906) | 4416906..4417112 | - | 207 | WP_001547758.1 | AlpA family phage regulatory protein | - |
| J6O38_RS21660 (4417562) | 4417562..4418488 | + | 927 | WP_001547760.1 | hypothetical protein | - |
| J6O38_RS21665 (4418595) | 4418595..4419458 | + | 864 | WP_016239725.1 | GTPase family protein | - |
| J6O38_RS21670 (4419550) | 4419550..4420371 | + | 822 | WP_223610821.1 | DUF932 domain-containing protein | - |
| J6O38_RS21675 (4420588) | 4420588..4421289 | + | 702 | WP_016239437.1 | WYL domain-containing protein | - |
| J6O38_RS21680 (4421330) | 4421330..4421566 | + | 237 | WP_001144031.1 | protein YpjK | - |
| J6O38_RS21685 (4421566) | 4421566..4422009 | + | 444 | WP_001547764.1 | lipoprotein YafY | - |
| J6O38_RS21690 (4422032) | 4422032..4422499 | + | 468 | WP_001385283.1 | protein YkfB | - |
| J6O38_RS21695 (4422576) | 4422576..4422815 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O38_RS21700 (4422913) | 4422913..4423371 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| J6O38_RS21705 (4423387) | 4423387..4423863 | + | 477 | WP_000811693.1 | RadC family protein | - |
| J6O38_RS21710 (4423872) | 4423872..4424093 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O38_RS21715 (4424112) | 4424112..4424438 | + | 327 | WP_001548930.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O38_RS21720 (4424528) | 4424528..4424905 | + | 378 | WP_000854726.1 | TA system toxin CbtA family protein | Toxin Detail |
| J6O38_RS21725 (4424902) | 4424902..4425390 | + | 489 | WP_001547769.1 | DUF5983 family protein | - |
| J6O38_RS21730 (4425402) | 4425402..4425599 | + | 198 | WP_000839269.1 | DUF957 domain-containing protein | - |
| J6O38_RS21735 (4425684) | 4425684..4426526 | + | 843 | WP_001547770.1 | DUF4942 domain-containing protein | - |
| J6O38_RS21740 (4427275) | 4427275..4428813 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| J6O38_RS21745 (4429179) | 4429179..4430513 | + | 1335 | WP_099483623.1 | cadaverine/lysine antiporter | - |
| J6O38_RS21750 (4430593) | 4430593..4432740 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| J6O38_RS21755 (4432799) | 4432799..4434256 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| J6O38_RS21760 (4434493) | 4434493..4436010 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| J6O38_RS21765 (4436129) | 4436129..4436302 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| J6O38_RS21770 (4436330) | 4436330..4436626 | - | 297 | WP_001425728.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| J6O38_RS21775 (4436853) | 4436853..4437125 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| J6O38_RS21780 (4437137) | 4437137..4437367 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| J6O38_RS21785 (4437548) | 4437548..4439179 | + | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| J6O38_RS21790 (4439176) | 4439176..4439895 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|