MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 46678 bp
Accession: NZ_CP081719 Location: 1118519..1165196 Organism: Escherichia coli strain CX05 Replicon: chromosome
Accession: NZ_CP081719 Location: 1118519..1165196 Organism: Escherichia coli strain CX05 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O38_RS05460 (1114461) | 1114461..1115825 | - | 1365 | WP_000104466.1 | GntP family transporter | - |
| J6O38_RS05465 (1115914) | 1115914..1116690 | - | 777 | WP_001136936.1 | HPr family phosphocarrier protein | - |
| J6O38_RS05470 (1116695) | 1116695..1117333 | - | 639 | WP_001278994.1 | aldolase | - |
| J6O38_RS05475 (1117330) | 1117330..1118592 | - | 1263 | Protein_1076 | four-carbon acid sugar kinase family protein | - |
| J6O38_RS05480 (1118589) | 1118589..1119497 | - | 909 | WP_000847985.1 | NAD(P)-dependent oxidoreductase | - |
| J6O38_RS05485 (1119693) | 1119693..1120460 | + | 768 | WP_001300386.1 | DNA-binding transcriptional repressor YgbI | - |
| J6O38_RS05490 (1120511) | 1120511..1121167 | - | 657 | WP_001141341.1 | protein-serine/threonine phosphatase | - |
| J6O38_RS05495 (1121273) | 1121273..1123840 | - | 2568 | WP_089683204.1 | DNA mismatch repair protein MutS | - |
| J6O38_RS05500 (1124000) | 1124000..1125454 | + | 1455 | WP_001530776.1 | hypothetical protein | - |
| J6O38_RS05505 (1125466) | 1125466..1126041 | + | 576 | WP_004114867.1 | hypothetical protein | - |
| J6O38_RS05510 (1126131) | 1126131..1126697 | - | 567 | WP_016239675.1 | helix-turn-helix domain-containing protein | - |
| J6O38_RS05515 (1127680) | 1127680..1128105 | + | 426 | WP_004114857.1 | hypothetical protein | - |
| J6O38_RS05520 (1128251) | 1128251..1128571 | - | 321 | WP_000860569.1 | hypothetical protein | - |
| J6O38_RS05525 (1128598) | 1128598..1128984 | - | 387 | WP_223610843.1 | hypothetical protein | - |
| J6O38_RS05530 (1129033) | 1129033..1129305 | - | 273 | WP_004114852.1 | hypothetical protein | - |
| J6O38_RS05535 (1129495) | 1129495..1130712 | - | 1218 | WP_147690689.1 | relaxase/mobilization nuclease domain-containing protein | - |
| J6O38_RS05540 (1130709) | 1130709..1131113 | - | 405 | WP_147690690.1 | ATP-binding protein | - |
| J6O38_RS05545 (1131290) | 1131290..1132234 | - | 945 | WP_023294352.1 | ankyrin repeat domain-containing protein | - |
| J6O38_RS05550 (1132250) | 1132250..1132690 | - | 441 | WP_016246254.1 | hypothetical protein | - |
| J6O38_RS05555 (1133047) | 1133047..1134033 | - | 987 | WP_147690691.1 | ankyrin repeat domain-containing protein | - |
| J6O38_RS05560 (1134553) | 1134553..1135208 | + | 656 | WP_223610844.1 | IS1 family transposase | - |
| J6O38_RS05565 (1135237) | 1135237..1135934 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| J6O38_RS05570 (1136040) | 1136040..1139279 | - | 3240 | WP_062921026.1 | type I restriction endonuclease subunit R | - |
| J6O38_RS05575 (1139338) | 1139338..1140582 | - | 1245 | WP_137578622.1 | restriction endonuclease subunit S | - |
| J6O38_RS05580 (1140579) | 1140579..1142126 | - | 1548 | WP_097337720.1 | class I SAM-dependent DNA methyltransferase | - |
| J6O38_RS05585 (1142383) | 1142383..1142607 | + | 225 | Protein_1098 | integrase core domain-containing protein | - |
| J6O38_RS05590 (1143343) | 1143343..1145463 | + | 2121 | WP_097365576.1 | AAA family ATPase | - |
| J6O38_RS05595 (1145465) | 1145465..1147216 | + | 1752 | WP_223610845.1 | ATP-dependent helicase | - |
| J6O38_RS05600 (1147334) | 1147334..1147564 | + | 231 | WP_097365577.1 | hypothetical protein | - |
| J6O38_RS05605 (1147670) | 1147670..1148104 | + | 435 | Protein_1102 | IS3 family transposase ISKpn20 | Transposase |
| J6O38_RS05610 (1148631) | 1148631..1148765 | + | 135 | WP_000611926.1 | hypothetical protein | - |
| J6O38_RS05615 (1148842) | 1148842..1149195 | + | 354 | WP_000015499.1 | nitrous oxide-stimulated promoter family protein | - |
| J6O38_RS05620 (1149232) | 1149232..1151310 | - | 2079 | WP_001297144.1 | Formate hydrogenlyase transcriptional activator FhlA | VF |
| J6O38_RS05625 (1151384) | 1151384..1152394 | - | 1011 | WP_001059936.1 | hydrogenase maturation carbamoyl dehydratase HypE | - |
| J6O38_RS05630 (1152391) | 1152391..1153512 | - | 1122 | WP_001212982.1 | hydrogenase formation protein HypD | - |
| J6O38_RS05635 (1153512) | 1153512..1153784 | - | 273 | WP_000334881.1 | hydrogenase 3 maturation protein HypC | - |
| J6O38_RS05640 (1153775) | 1153775..1154647 | - | 873 | WP_000337665.1 | hydrogenase nickel incorporation protein HypB | - |
| J6O38_RS05645 (1154651) | 1154651..1155001 | - | 351 | WP_001299100.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| J6O38_RS05650 (1155213) | 1155213..1155674 | + | 462 | WP_000158056.1 | formate hydrogenlyase regulator HycA | - |
| J6O38_RS05655 (1155799) | 1155799..1156410 | + | 612 | WP_001079186.1 | formate hydrogenlyase subunit HycB | - |
| J6O38_RS05660 (1156407) | 1156407..1158233 | + | 1827 | WP_001274388.1 | formate hydrogenlyase subunit 3 | - |
| J6O38_RS05665 (1158236) | 1158236..1159159 | + | 924 | WP_000115200.1 | formate hydrogenlyase subunit HycD | - |
| J6O38_RS05670 (1159177) | 1159177..1160886 | + | 1710 | WP_001288140.1 | formate hydrogenlyase subunit HycE | - |
| J6O38_RS05675 (1160896) | 1160896..1161438 | + | 543 | WP_000493792.1 | formate hydrogenlyase subunit HycF | - |
| J6O38_RS05680 (1161438) | 1161438..1162205 | + | 768 | WP_000067401.1 | formate hydrogenlyase subunit HycG | - |
| J6O38_RS05685 (1162202) | 1162202..1162612 | + | 411 | WP_001291918.1 | formate hydrogenlyase assembly protein HycH | - |
| J6O38_RS05690 (1162605) | 1162605..1163075 | + | 471 | WP_000132961.1 | hydrogenase maturation peptidase HycI | - |
| J6O38_RS05695 (1163100) | 1163100..1163861 | + | 762 | WP_001026446.1 | hypothetical protein | - |
| J6O38_RS05700 (1164035) | 1164035..1164346 | + | 312 | WP_000547564.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| J6O38_RS05705 (1164343) | 1164343..1164762 | + | 420 | WP_000126294.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| J6O38_RS05710 (1164876) | 1164876..1166300 | - | 1425 | WP_000110363.1 | 6-phospho-beta-glucosidase AscB | - |
| J6O38_RS05715 (1166309) | 1166309..1167766 | - | 1458 | WP_001107882.1 | PTS cellobiose/arbutin/salicin transporter subunit IIBC | - |
| J6O38_RS05720 (1168026) | 1168026..1169036 | + | 1011 | WP_001402444.1 | DNA-binding transcriptional regulator AscG | - |
| J6O38_RS05725 (1169185) | 1169185..1169712 | + | 528 | WP_001078777.1 | electron transport protein HydN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|