MGE detailed information
MGE type: Genomic_island MGE length: 36356 bp
Accession: NZ_CP081713 Location: 3843354..3879709 Organism: Escherichia coli strain CX04 Replicon: chromosome
Accession: NZ_CP081713 Location: 3843354..3879709 Organism: Escherichia coli strain CX04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O07_RS18720 (3838378) | 3838378..3838803 | + | 426 | Protein_3674 | IS3 family transposase | - |
| J6O07_RS18725 (3839476) | 3839476..3840984 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| J6O07_RS18730 (3841065) | 3841065..3841553 | + | 489 | Protein_3676 | IS3 family transposase | - |
| J6O07_RS18735 (3841451) | 3841451..3842749 | - | 1299 | WP_000342159.1 | IS256 family transposase | - |
| J6O07_RS18740 (3842967) | 3842967..3843131 | - | 165 | Protein_3678 | transposase domain-containing protein | - |
| J6O07_RS18745 (3843076) | 3843076..3843339 | - | 264 | WP_001247776.1 | transposase | - |
| J6O07_RS18750 (3843354) | 3843354..3843617 | + | 264 | WP_001549018.1 | hypothetical protein | - |
| J6O07_RS18755 (3843846) | 3843846..3844127 | + | 282 | WP_000643628.1 | helix-turn-helix domain-containing protein | - |
| J6O07_RS18760 (3844162) | 3844162..3844731 | + | 570 | WP_000350435.1 | Spore protein SP21 | VF |
| J6O07_RS18765 (3844837) | 3844837..3847719 | + | 2883 | WP_000101612.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| J6O07_RS18770 (3847719) | 3847719..3847910 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| J6O07_RS18775 (3847971) | 3847971..3849698 | + | 1728 | WP_000412528.1 | FtsH/Yme1/Tma family ATP-dependent metallopeptidase | - |
| J6O07_RS18780 (3849786) | 3849786..3850244 | + | 459 | WP_001275372.1 | Spore protein SP21 | VF |
| J6O07_RS18785 (3850267) | 3850267..3851181 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| J6O07_RS18790 (3851284) | 3851284..3852171 | + | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| J6O07_RS18795 (3852261) | 3852261..3852872 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| J6O07_RS18800 (3852952) | 3852952..3854097 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| J6O07_RS18805 (3854087) | 3854087..3854527 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| J6O07_RS18810 (3854531) | 3854531..3856246 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| J6O07_RS18815 (3856243) | 3856243..3856740 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| J6O07_RS18820 (3856718) | 3856718..3857683 | + | 966 | WP_000196689.1 | zinc metalloprotease HtpX | - |
| J6O07_RS18825 (3857708) | 3857708..3858859 | + | 1152 | WP_000323729.1 | Putative serine protease HhoB | VF |
| J6O07_RS18830 (3859084) | 3859084..3859653 | - | 570 | Protein_3696 | IS5 family transposase ISPa16 | Transposase |
| J6O07_RS18835 (3860775) | 3860775..3861638 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| J6O07_RS18840 (3861730) | 3861730..3862551 | + | 822 | WP_000197388.1 | DUF932 domain-containing protein | - |
| J6O07_RS18845 (3862768) | 3862768..3863469 | + | 702 | WP_060616110.1 | WYL domain-containing protein | - |
| J6O07_RS18850 (3863510) | 3863510..3863746 | + | 237 | WP_001144031.1 | protein YpjK | - |
| J6O07_RS18855 (3863746) | 3863746..3864189 | + | 444 | WP_000649865.1 | hypothetical protein | - |
| J6O07_RS18860 (3864212) | 3864212..3864679 | + | 468 | WP_001385283.1 | protein YkfB | - |
| J6O07_RS18865 (3864756) | 3864756..3864995 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O07_RS18870 (3865093) | 3865093..3865551 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| J6O07_RS18875 (3865567) | 3865567..3866043 | + | 477 | WP_001549015.1 | RadC family protein | - |
| J6O07_RS18880 (3866052) | 3866052..3866273 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O07_RS18885 (3866292) | 3866292..3866609 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O07_RS18890 (3866630) | 3866630..3866971 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| J6O07_RS18895 (3867792) | 3867792..3869258 | - | 1467 | WP_000723924.1 | hypothetical protein | - |
| J6O07_RS18900 (3869574) | 3869574..3869963 | - | 390 | WP_223596848.1 | hypothetical protein | - |
| J6O07_RS18905 (3870207) | 3870207..3870293 | - | 87 | Protein_3711 | capsid protein | - |
| J6O07_RS18910 (3870498) | 3870498..3871271 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| J6O07_RS18915 (3871332) | 3871332..3871886 | - | 555 | WP_000905043.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| J6O07_RS18920 (3871916) | 3871916..3872485 | + | 570 | WP_002431159.1 | hypothetical protein | - |
| J6O07_RS18925 (3872485) | 3872485..3873078 | + | 594 | WP_000613358.1 | tail fiber assembly protein | - |
| J6O07_RS18930 (3873050) | 3873050..3873493 | - | 444 | WP_000978831.1 | tail fiber assembly protein | - |
| J6O07_RS18935 (3873493) | 3873493..3874116 | - | 624 | WP_000554682.1 | hypothetical protein | - |
| J6O07_RS18940 (3874120) | 3874120..3874704 | - | 585 | WP_016243480.1 | YmfQ family protein | - |
| J6O07_RS18945 (3874695) | 3874695..3875753 | - | 1059 | WP_016243479.1 | baseplate J/gp47 family protein | - |
| J6O07_RS18950 (3875740) | 3875740..3876165 | - | 426 | WP_042027905.1 | phage GP46 family protein | - |
| J6O07_RS18955 (3876165) | 3876165..3876713 | - | 549 | WP_001542670.1 | phage baseplate assembly protein V | - |
| J6O07_RS18960 (3876713) | 3876713..3877792 | - | 1080 | WP_016243477.1 | phage tail protein | - |
| J6O07_RS18965 (3877789) | 3877789..3879117 | - | 1329 | WP_016243476.1 | DNA circularization N-terminal domain-containing protein | - |
| J6O07_RS18970 (3879179) | 3879179..3879709 | - | 531 | WP_000679479.1 | hypothetical protein | - |
| J6O07_RS18975 (3879801) | 3879801..3881633 | - | 1833 | WP_016243475.1 | phage tail tape measure protein | - |
| J6O07_RS18980 (3881775) | 3881775..3882044 | - | 270 | WP_000661051.1 | phage tail assembly protein | - |
| J6O07_RS18985 (3882044) | 3882044..3882400 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| J6O07_RS18990 (3882400) | 3882400..3883896 | - | 1497 | WP_001759749.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| J6O07_RS18995 (3883880) | 3883880..3884049 | - | 170 | Protein_3729 | DUF2635 domain-containing protein | - |
| J6O07_RS19000 (3884058) | 3884058..3884618 | - | 561 | WP_016243473.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|