MGE detailed information
MGE type: IScluster/Tn MGE length: 20026 bp
Accession: NZ_CP081712 Location: 48610..68635 Organism: Escherichia coli strain AH21 Replicon: plasmid unnamed1
Accession: NZ_CP081712 Location: 48610..68635 Organism: Escherichia coli strain AH21 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O42_RS23225 (J6O42_23125) | 45812..46438 | + | 627 | WP_000816147.1 | dimethylsulfoxide reductase subunit B | - |
| J6O42_RS23230 (J6O42_23130) | 46431..47207 | + | 777 | WP_000544912.1 | dimethyl sulfoxide reductase anchor subunit | - |
| J6O42_RS23235 (J6O42_23135) | 47262..47858 | + | 597 | WP_001139856.1 | Tat proofreading chaperone DmsD | - |
| J6O42_RS23240 (J6O42_23140) | 47888..48385 | + | 498 | WP_000019701.1 | 4Fe-4S binding protein | - |
| J6O42_RS23245 (J6O42_23145) | 48610..49590 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O42_RS23250 (J6O42_23150) | 50219..50440 | + | 222 | WP_000542385.1 | hypothetical protein | - |
| J6O42_RS23255 (J6O42_23155) | 50448..51479 | + | 1032 | WP_001471764.1 | site-specific integrase | - |
| J6O42_RS23260 (J6O42_23160) | 51530..51841 | + | 312 | WP_001224243.1 | hypothetical protein | - |
| J6O42_RS23265 (J6O42_23165) | 52089..52391 | + | 303 | Protein_67 | Ref family protein | - |
| J6O42_RS23270 (J6O42_23170) | 52424..55078 | - | 2655 | Protein_68 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| J6O42_RS23275 (J6O42_23175) | 55135..55718 | + | 584 | Protein_69 | IS1 family transposase | - |
| J6O42_RS23280 (J6O42_23180) | 55736..56758 | + | 1023 | Protein_70 | IS30 family transposase IS30D | Transposase |
| J6O42_RS23425 (J6O42_23185) | 56801..57214 | + | 414 | WP_242426044.1 | IS30 family transposase IS30D | Transposase |
| J6O42_RS23285 (J6O42_23190) | 57308..58363 | + | 1056 | WP_001493054.1 | Dyp-type peroxidase | - |
| J6O42_RS23290 (J6O42_23195) | 58365..59171 | + | 807 | WP_001061052.1 | family 1 encapsulin nanocompartment shell protein | - |
| J6O42_RS23295 (J6O42_23200) | 59223..60074 | - | 852 | WP_000159625.1 | RNA polymerase sigma factor RpoH | - |
| J6O42_RS23300 (J6O42_23205) | 60673..60674 | - | 2 | WP_001743396.1 | IS1 family transposase IS1A | Transposase |
| J6O42_RS23305 (J6O42_23210) | 60973..62028 | + | 1056 | Protein_76 | FAD-dependent oxidoreductase | - |
| J6O42_RS23310 (J6O42_23215) | 62235..62932 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| J6O42_RS23315 (J6O42_23220) | 63033..63314 | - | 282 | WP_000639435.1 | hypothetical protein | - |
| J6O42_RS23320 (J6O42_23225) | 63463..63708 | + | 246 | WP_163396968.1 | hypothetical protein | - |
| J6O42_RS23325 (J6O42_23230) | 63766..64554 | - | 789 | WP_001063461.1 | site-specific integrase | - |
| J6O42_RS23330 (J6O42_23235) | 64574..65245 | - | 672 | WP_000796235.1 | hypothetical protein | - |
| J6O42_RS23335 (J6O42_23240) | 66179..66409 | + | 231 | WP_001261275.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| J6O42_RS23340 (J6O42_23245) | 66406..66822 | + | 417 | WP_000754567.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| J6O42_RS23345 (J6O42_23250) | 67073..68119 | + | 1047 | WP_032182506.1 | IS481 family transposase ISKpn28 | Transposase |
| J6O42_RS23350 (J6O42_23255) | 68111..68680 | - | 570 | Protein_85 | IS5 family transposase IS903B | Transposase |
| J6O42_RS23355 (J6O42_23260) | 68992..69426 | + | 435 | WP_000103648.1 | RidA family protein | - |
| J6O42_RS23360 (J6O42_23265) | 69431..70105 | + | 675 | WP_000175734.1 | DUF1028 domain-containing protein | - |
| J6O42_RS23365 (J6O42_23270) | 70121..71278 | + | 1158 | WP_000633254.1 | acetylornithine deacetylase | - |
| J6O42_RS23370 (J6O42_23275) | 71449..72597 | + | 1149 | WP_000252877.1 | ABC transporter ATP-binding protein | - |
| J6O42_RS23375 (J6O42_23280) | 72616..73599 | + | 984 | WP_001471744.1 | NAD(P)H-quinone oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|