MGE detailed information
MGE type: IScluster/Tn MGE length: 11480 bp
Accession: NZ_CP081711 Location: 2282970..2294449 Organism: Escherichia coli strain AH21 Replicon: chromosome
Accession: NZ_CP081711 Location: 2282970..2294449 Organism: Escherichia coli strain AH21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O42_RS10915 (2278656) | 2278656..2279675 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| J6O42_RS10920 (2279863) | 2279863..2281143 | - | 1281 | WP_000876958.1 | site-specific integrase | - |
| J6O42_RS10925 (2281178) | 2281178..2281429 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| J6O42_RS10930 (2281502) | 2281502..2282896 | - | 1395 | Protein_2132 | 3'-5' exoribonuclease | - |
| J6O42_RS10940 (2284255) | 2284255..2284797 | - | 543 | Protein_2134 | hypothetical protein | - |
| J6O42_RS10945 (2284787) | 2284787..2285038 | + | 252 | Protein_2135 | DUF977 family protein | - |
| J6O42_RS10950 (2285035) | 2285035..2285220 | + | 186 | Protein_2136 | class I SAM-dependent methyltransferase | - |
| J6O42_RS10955 (2285275) | 2285275..2285972 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| J6O42_RS10960 (2285980) | 2285980..2286301 | + | 322 | Protein_2138 | SAM-dependent methyltransferase | - |
| J6O42_RS10965 (2286779) | 2286779..2287200 | + | 422 | Protein_2139 | hypothetical protein | - |
| J6O42_RS10970 (2287528) | 2287528..2288508 | + | 981 | Protein_2140 | IS5 family transposase ISKpn26 | Transposase |
| J6O42_RS10975 (2289056) | 2289056..2290078 | + | 1023 | Protein_2141 | ISNCY family transposase ISCARN112 | Transposase |
| J6O42_RS10980 (2290199) | 2290199..2290348 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| J6O42_RS10985 (2290785) | 2290785..2291117 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| J6O42_RS10990 (2291320) | 2291320..2291625 | - | 306 | WP_001326990.1 | protein YdfV | - |
| J6O42_RS10995 (2291650) | 2291650..2291889 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| J6O42_RS11000 (2291889) | 2291889..2292176 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| J6O42_RS11005 (2292248) | 2292248..2292403 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| J6O42_RS11010 (2292517) | 2292517..2294052 | - | 1536 | WP_001000406.1 | IS66 family transposase ISSgsp1 | Transposase |
| J6O42_RS11015 (2294102) | 2294102..2294449 | - | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| J6O42_RS11025 (2295065) | 2295065..2295316 | + | 252 | WP_000980994.1 | protein Rem | - |
| J6O42_RS11030 (2295383) | 2295383..2295661 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| J6O42_RS11035 (2295663) | 2295663..2296712 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| J6O42_RS11040 (2296726) | 2296726..2297478 | + | 753 | WP_001047135.1 | antitermination protein | - |
| J6O42_RS11045 (2297756) | 2297756..2297845 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| J6O42_RS11050 (2297900) | 2297900..2298112 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| J6O42_RS11055 (2298413) | 2298413..2298628 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| J6O42_RS11060 (2298992) | 2298992..2299162 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|