MGE detailed information
MGE type: Prophage MGE length: 41166 bp
Accession: NZ_CP081711 Location: 2268108..2309273 Organism: Escherichia coli strain AH21 Replicon: chromosome
Accession: NZ_CP081711 Location: 2268108..2309273 Organism: Escherichia coli strain AH21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O42_RS10845 (2264007) | 2264007..2265227 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| J6O42_RS10850 (2265352) | 2265352..2266047 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| J6O42_RS10855 (2266000) | 2266000..2267292 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| J6O42_RS10860 (2267451) | 2267451..2268065 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| J6O42_RS10865 (2268108) | 2268108..2268962 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| J6O42_RS10870 (2268964) | 2268964..2269581 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| J6O42_RS10875 (2269592) | 2269592..2272015 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| J6O42_RS10880 (2272076) | 2272076..2274502 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| J6O42_RS10885 (2274701) | 2274701..2275006 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| J6O42_RS10890 (2275114) | 2275114..2275824 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| J6O42_RS10895 (2275827) | 2275827..2276387 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| J6O42_RS10900 (2276422) | 2276422..2276763 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| J6O42_RS10905 (2276898) | 2276898..2277224 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| J6O42_RS10910 (2277430) | 2277430..2278644 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| J6O42_RS10915 (2278656) | 2278656..2279675 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| J6O42_RS10920 (2279863) | 2279863..2281143 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| J6O42_RS10925 (2281178) | 2281178..2281429 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| J6O42_RS10930 (2281502) | 2281502..2282896 | - | 1395 | Protein_2132 | 3'-5' exoribonuclease | - |
| J6O42_RS10940 (2284255) | 2284255..2284797 | - | 543 | Protein_2134 | hypothetical protein | - |
| J6O42_RS10945 (2284787) | 2284787..2285038 | + | 252 | Protein_2135 | DUF977 family protein | - |
| J6O42_RS10950 (2285035) | 2285035..2285220 | + | 186 | Protein_2136 | class I SAM-dependent methyltransferase | - |
| J6O42_RS10955 (2285275) | 2285275..2285972 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| J6O42_RS10960 (2285980) | 2285980..2286301 | + | 322 | Protein_2138 | SAM-dependent methyltransferase | - |
| J6O42_RS10965 (2286779) | 2286779..2287200 | + | 422 | Protein_2139 | hypothetical protein | - |
| J6O42_RS10970 (2287528) | 2287528..2288508 | + | 981 | Protein_2140 | IS5 family transposase ISKpn26 | Transposase |
| J6O42_RS10975 (2289056) | 2289056..2290078 | + | 1023 | Protein_2141 | ISNCY family transposase ISCARN112 | Transposase |
| J6O42_RS10980 (2290199) | 2290199..2290348 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| J6O42_RS10985 (2290785) | 2290785..2291117 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| J6O42_RS10990 (2291320) | 2291320..2291625 | - | 306 | WP_001326990.1 | protein YdfV | - |
| J6O42_RS10995 (2291650) | 2291650..2291889 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| J6O42_RS11000 (2291889) | 2291889..2292176 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| J6O42_RS11005 (2292248) | 2292248..2292403 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| J6O42_RS11010 (2292517) | 2292517..2294052 | - | 1536 | WP_001000406.1 | IS66 family transposase ISSgsp1 | Transposase |
| J6O42_RS11015 (2294102) | 2294102..2294449 | - | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| J6O42_RS11025 (2295065) | 2295065..2295316 | + | 252 | WP_000980994.1 | protein Rem | - |
| J6O42_RS11030 (2295383) | 2295383..2295661 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| J6O42_RS11035 (2295663) | 2295663..2296712 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| J6O42_RS11040 (2296726) | 2296726..2297478 | + | 753 | WP_001047135.1 | antitermination protein | - |
| J6O42_RS11045 (2297756) | 2297756..2297845 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| J6O42_RS11050 (2297900) | 2297900..2298112 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| J6O42_RS11055 (2298413) | 2298413..2298628 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| J6O42_RS11060 (2298992) | 2298992..2299162 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| J6O42_RS11065 (2299382) | 2299382..2299597 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| J6O42_RS11070 (2299602) | 2299602..2299913 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| J6O42_RS11075 (2299910) | 2299910..2300443 | + | 534 | WP_001092971.1 | lysozyme | - |
| J6O42_RS11080 (2300440) | 2300440..2300937 | + | 498 | WP_032191976.1 | DUF2514 domain-containing protein | - |
| J6O42_RS11085 (2301300) | 2301300..2301512 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| J6O42_RS11090 (2301523) | 2301523..2301711 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| J6O42_RS11095 (2301714) | 2301714..2301779 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| J6O42_RS11100 (2301859) | 2301859..2302014 | + | 156 | WP_001309517.1 | protein YnfN | - |
| J6O42_RS11105 (2302186) | 2302186..2302359 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| J6O42_RS11110 (2302511) | 2302511..2302921 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| J6O42_RS11115 (2302979) | 2302979..2303212 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| J6O42_RS11120 (2303601) | 2303601..2303858 | + | 258 | WP_001310828.1 | terminase small subunit | - |
| J6O42_RS11125 (2303833) | 2303833..2305092 | + | 1260 | Protein_2170 | phage tail protein | - |
| J6O42_RS11130 (2305179) | 2305179..2305391 | + | 213 | Protein_2171 | hypothetical protein | - |
| J6O42_RS11135 (2305391) | 2305391..2305966 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| J6O42_RS11140 (2306064) | 2306064..2306654 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| J6O42_RS11145 (2306971) | 2306971..2307204 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| J6O42_RS11150 (2307273) | 2307273..2307386 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| J6O42_RS11155 (2307990) | 2307990..2309273 | + | 1284 | Protein_2176 | MHS family MFS transporter YdfJ | - |
| J6O42_RS11160 (2309362) | 2309362..2310822 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| J6O42_RS11165 (2310857) | 2310857..2311060 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| J6O42_RS11170 (2311237) | 2311237..2311923 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| J6O42_RS11175 (2312012) | 2312012..2312758 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|