MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 86367 bp
Accession: NZ_CP081692 Location: 1..86367 Organism: Escherichia coli strain 0H25 Replicon: plasmid unnamed2
Accession: NZ_CP081692 Location: 1..86367 Organism: Escherichia coli strain 0H25 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O25_RS26155 (J6O25_26020) | 477..926 | + | 450 | WP_137366881.1 | hypothetical protein | - |
| J6O25_RS26160 (J6O25_26025) | 923..1150 | + | 228 | WP_008324899.1 | hypothetical protein | - |
| J6O25_RS26165 (J6O25_26030) | 1140..1739 | + | 600 | WP_008324897.1 | F-type conjugal transfer protein TrbB | - |
| J6O25_RS26170 (J6O25_26035) | 1926..3290 | + | 1365 | WP_104652350.1 | conjugal transfer pilus assembly protein TraH | - |
| J6O25_RS26175 (J6O25_26040) | 3290..6523 | + | 3234 | WP_191219939.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| J6O25_RS26180 (J6O25_26045) | 6532..7242 | + | 711 | WP_223584538.1 | hypothetical protein | - |
| J6O25_RS26185 (J6O25_26050) | 7389..8120 | + | 732 | WP_223584537.1 | conjugal transfer complement resistance protein TraT | - |
| J6O25_RS26190 (J6O25_26055) | 8127..8438 | - | 312 | WP_191219936.1 | CcdB family protein | - |
| J6O25_RS26195 (J6O25_26060) | 8435..8683 | - | 249 | WP_191219935.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| J6O25_RS26200 (J6O25_26065) | 9184..10335 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| J6O25_RS26205 (J6O25_26070) | 10435..10743 | + | 309 | WP_193146064.1 | hypothetical protein | - |
| J6O25_RS26210 (J6O25_26075) | 10863..13394 | + | 2532 | WP_191226012.1 | type IV conjugative transfer system coupling protein TraD | - |
| J6O25_RS26215 (J6O25_26080) | 13391..18877 | + | 5487 | WP_191226010.1 | Multifunctional conjugation protein TraI | Relaxase |
| J6O25_RS26220 (J6O25_26085) | 18914..19717 | + | 804 | WP_191219957.1 | DsbA family protein | - |
| J6O25_RS26225 (J6O25_26090) | 19806..20129 | + | 324 | WP_008324877.1 | hypothetical protein | - |
| J6O25_RS26230 (J6O25_26095) | 20162..20710 | + | 549 | WP_191219959.1 | DUF2726 domain-containing protein | - |
| J6O25_RS26235 (J6O25_26100) | 21235..21378 | - | 144 | WP_001767846.1 | hypothetical protein | - |
| J6O25_RS26240 (J6O25_26105) | 21414..24101 | - | 2688 | WP_223584562.1 | autotransporter domain-containing protein | - |
| J6O25_RS26245 (J6O25_26110) | 24111..26510 | - | 2400 | WP_223584561.1 | Xanthan lyase | VF |
| J6O25_RS26250 (J6O25_26115) | 26529..27533 | - | 1005 | WP_012291304.1 | hypothetical protein | - |
| J6O25_RS26255 (J6O25_26120) | 27578..29035 | - | 1458 | WP_052750737.1 | DUF2264 domain-containing protein | - |
| J6O25_RS26260 (J6O25_26125) | 29069..30103 | - | 1035 | WP_012291312.1 | glycoside hydrolase family 88 protein | - |
| J6O25_RS26265 (J6O25_26130) | 30183..30620 | - | 438 | WP_012291315.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| J6O25_RS26270 (J6O25_26135) | 30630..31496 | - | 867 | WP_023247564.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| J6O25_RS26275 (J6O25_26140) | 31486..32256 | - | 771 | WP_012291321.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| J6O25_RS26280 (J6O25_26145) | 32276..32749 | - | 474 | WP_023247562.1 | PTS sugar transporter subunit IIB | - |
| J6O25_RS26285 (J6O25_26150) | 32862..33650 | - | 789 | WP_012291328.1 | DeoR family transcriptional regulator | - |
| J6O25_RS26290 (J6O25_26155) | 34200..35222 | - | 1023 | WP_016246530.1 | IS110 family transposase IS1618 | Transposase |
| J6O25_RS26295 | 35336..35476 | - | 141 | Protein_29 | arsenical pump-driving ATPase | - |
| J6O25_RS26300 (J6O25_26165) | 35596..36168 | - | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| J6O25_RS26305 (J6O25_26170) | 36332..36472 | + | 141 | WP_160185462.1 | Tn3 family transposase ISEc63 | Transposase |
| J6O25_RS26310 (J6O25_26175) | 36484..37188 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O25_RS26315 (J6O25_26180) | 37240..37596 | + | 357 | Protein_33 | IS91 family transposase ISMno23 | Transposase |
| J6O25_RS26320 (J6O25_26185) | 37919..38908 | - | 990 | WP_191221256.1 | RepB family plasmid replication initiator protein | - |
| J6O25_RS26325 (J6O25_26190) | 39723..39992 | + | 270 | WP_048213818.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| J6O25_RS26330 (J6O25_26195) | 39996..40526 | + | 531 | WP_048213819.1 | GNAT family N-acetyltransferase | Toxin Detail |
| J6O25_RS26335 (J6O25_26200) | 40611..41615 | - | 1005 | WP_048213820.1 | hypothetical protein | - |
| J6O25_RS26340 (J6O25_26205) | 41620..41865 | - | 246 | WP_048213821.1 | hypothetical protein | - |
| J6O25_RS26345 (J6O25_26210) | 42861..43247 | + | 387 | WP_059593784.1 | hypothetical protein | - |
| J6O25_RS26350 (J6O25_26215) | 43259..43792 | + | 534 | WP_065212827.1 | hypothetical protein | - |
| J6O25_RS26355 (J6O25_26220) | 43797..44576 | + | 780 | WP_050316692.1 | site-specific integrase | - |
| J6O25_RS26360 (J6O25_26225) | 44792..46342 | - | 1551 | WP_080402007.1 | SLC13 family permease | - |
| J6O25_RS26365 (J6O25_26230) | 46381..47379 | - | 999 | WP_059593788.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| J6O25_RS26370 (J6O25_26235) | 47402..48703 | - | 1302 | WP_059593790.1 | four-carbon acid sugar kinase family protein | - |
| J6O25_RS26375 (J6O25_26240) | 48736..49416 | - | 681 | WP_242658614.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| J6O25_RS26380 (J6O25_26245) | 49595..50593 | + | 999 | WP_059593794.1 | Arabinose 5-phosphate isomerase KdsD | VF |
| J6O25_RS26385 (J6O25_26250) | 51050..51706 | + | 657 | WP_059593848.1 | Protein SrpB | VF |
| J6O25_RS26390 (J6O25_26255) | 51904..52095 | - | 192 | WP_042313830.1 | hypothetical protein | - |
| J6O25_RS26395 (J6O25_26260) | 52606..53811 | + | 1206 | WP_059593797.1 | AAA family ATPase | - |
| J6O25_RS26400 (J6O25_26265) | 53811..54785 | + | 975 | WP_059593798.1 | ParB family protein | - |
| J6O25_RS26405 (J6O25_26270) | 54867..55049 | - | 183 | Protein_51 | DUF4113 domain-containing protein | - |
| J6O25_RS26410 (J6O25_26275) | 55053..55160 | + | 108 | Protein_52 | chromosome partitioning protein ParB | - |
| J6O25_RS26415 (J6O25_26280) | 55242..56516 | - | 1275 | WP_191221255.1 | Y-family DNA polymerase | - |
| J6O25_RS26420 (J6O25_26285) | 56516..56938 | - | 423 | WP_059593800.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| J6O25_RS26425 (J6O25_26290) | 57474..58409 | + | 936 | WP_059593802.1 | DUF1281 domain-containing protein | - |
| J6O25_RS26430 (J6O25_26295) | 58442..58789 | + | 348 | WP_059593804.1 | hypothetical protein | - |
| J6O25_RS26435 (J6O25_26300) | 59166..59846 | + | 681 | WP_058216376.1 | DNA methylase | - |
| J6O25_RS26440 (J6O25_26305) | 59846..60067 | + | 222 | WP_191221259.1 | hypothetical protein | - |
| J6O25_RS26445 (J6O25_26310) | 60078..60497 | + | 420 | WP_191221254.1 | DUF1380 family protein | - |
| J6O25_RS26450 (J6O25_26315) | 60553..60957 | + | 405 | WP_059593810.1 | DUF1380 family protein | - |
| J6O25_RS26455 (J6O25_26320) | 61025..61792 | + | 768 | WP_191221253.1 | hypothetical protein | - |
| J6O25_RS26460 (J6O25_26325) | 62210..62638 | + | 429 | WP_059593814.1 | antirestriction protein | - |
| J6O25_RS26465 (J6O25_26330) | 62657..63127 | + | 471 | WP_223584559.1 | DUF1380 family protein | - |
| J6O25_RS26470 (J6O25_26335) | 63171..63581 | + | 411 | WP_104652235.1 | DUF1380 domain-containing protein | - |
| J6O25_RS26475 (J6O25_26340) | 63595..63786 | + | 192 | WP_032934909.1 | hypothetical protein | - |
| J6O25_RS26480 (J6O25_26345) | 63955..64209 | + | 255 | WP_049040212.1 | DNA polymerase III subunit theta | - |
| J6O25_RS26485 | 64509..64657 | - | 149 | Protein_67 | hypothetical protein | - |
| J6O25_RS26490 (J6O25_26355) | 64961..65188 | + | 228 | WP_191221252.1 | hypothetical protein | - |
| J6O25_RS26495 (J6O25_26360) | 65282..65512 | + | 231 | WP_191221251.1 | hypothetical protein | - |
| J6O25_RS26500 (J6O25_26365) | 65564..66946 | + | 1383 | WP_191221250.1 | DUF3560 domain-containing protein | - |
| J6O25_RS26505 (J6O25_26370) | 66993..67556 | + | 564 | WP_191219947.1 | methyltransferase | - |
| J6O25_RS26510 (J6O25_26375) | 68335..68697 | + | 363 | WP_104652231.1 | hypothetical protein | - |
| J6O25_RS26515 (J6O25_26380) | 68783..69049 | + | 267 | WP_008324972.1 | hypothetical protein | - |
| J6O25_RS26520 (J6O25_26385) | 69066..69887 | + | 822 | WP_008324970.1 | DUF932 domain-containing protein | - |
| J6O25_RS26525 (J6O25_26390) | 69923..70453 | - | 531 | WP_191219944.1 | hypothetical protein | VF |
| J6O25_RS26530 (J6O25_26395) | 71119..71511 | + | 393 | WP_008324961.1 | relaxosome protein TraM | - |
| J6O25_RS26535 (J6O25_26400) | 71544..72185 | - | 642 | WP_191219943.1 | Arc family DNA-binding protein | - |
| J6O25_RS26540 (J6O25_26405) | 72382..72735 | + | 354 | WP_104652443.1 | type IV conjugative transfer system pilin TraA | - |
| J6O25_RS26545 (J6O25_26410) | 72738..73040 | + | 303 | WP_104652433.1 | type IV conjugative transfer system protein TraL | - |
| J6O25_RS26550 (J6O25_26415) | 73046..73630 | + | 585 | WP_008324957.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| J6O25_RS26555 (J6O25_26420) | 73642..74382 | + | 741 | WP_223584557.1 | type-F conjugative transfer system secretin TraK | - |
| J6O25_RS26560 (J6O25_26425) | 74379..75775 | + | 1397 | Protein_82 | conjugal transfer protein TraB | - |
| J6O25_RS26565 (J6O25_26430) | 75784..76266 | + | 483 | WP_137366884.1 | hypothetical protein | - |
| J6O25_RS26570 (J6O25_26435) | 76263..76667 | + | 405 | WP_223584549.1 | hypothetical protein | - |
| J6O25_RS26575 (J6O25_26440) | 76728..77285 | + | 558 | WP_104652359.1 | type IV conjugative transfer system lipoprotein TraV | - |
| J6O25_RS26580 (J6O25_26445) | 77282..79885 | + | 2604 | WP_104652358.1 | type IV secretion system protein TraC | - |
| J6O25_RS26585 (J6O25_26450) | 79882..80298 | + | 417 | WP_008325088.1 | type-F conjugative transfer system protein TrbI | - |
| J6O25_RS26590 (J6O25_26455) | 80295..80931 | + | 637 | Protein_88 | type-F conjugative transfer system protein TraW | - |
| J6O25_RS26595 (J6O25_26460) | 80928..81248 | + | 321 | WP_008325090.1 | hypothetical protein | - |
| J6O25_RS26600 (J6O25_26465) | 81323..81868 | + | 546 | WP_191226008.1 | hypothetical protein | - |
| J6O25_RS26605 (J6O25_26470) | 81976..82197 | + | 222 | WP_104652355.1 | hypothetical protein | - |
| J6O25_RS26610 (J6O25_26475) | 82253..82576 | + | 324 | WP_008325099.1 | hypothetical protein | - |
| J6O25_RS26615 (J6O25_26480) | 82573..83570 | + | 998 | Protein_93 | conjugal transfer pilus assembly protein TraU | - |
| J6O25_RS26620 (J6O25_26485) | 83581..84201 | + | 621 | WP_008325101.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| J6O25_RS26625 (J6O25_26490) | 84198..86054 | + | 1857 | WP_223584544.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|