MGE detailed information
MGE type: IScluster/Tn MGE length: 33131 bp
Accession: NZ_CP081687 Location: 16..33146 Organism: Escherichia coli strain 0H23 Replicon: plasmid unnamed3
Accession: NZ_CP081687 Location: 16..33146 Organism: Escherichia coli strain 0H23 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O16_RS26625 (J6O16_26540) | 746..1324 | + | 579 | WP_032142246.1 | DUF2726 domain-containing protein | - |
| J6O16_RS26630 (J6O16_26545) | 1564..1821 | + | 258 | WP_000083825.1 | replication regulatory protein RepA | - |
| J6O16_RS26635 (J6O16_26550) | 2056..2130 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| J6O16_RS26640 (J6O16_26555) | 2123..2980 | + | 858 | Protein_4 | incFII family plasmid replication initiator RepA | - |
| J6O16_RS26645 (J6O16_26560) | 3918..4571 | + | 654 | WP_000616806.1 | CPBP family intramembrane metalloprotease | - |
| J6O16_RS26650 (J6O16_26565) | 4664..4921 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| J6O16_RS26655 (J6O16_26570) | 4854..5255 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| J6O16_RS26660 (J6O16_26575) | 5569..6266 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| J6O16_RS26665 (J6O16_26580) | 6283..6513 | - | 231 | Protein_9 | IS5/IS1182 family transposase | - |
| J6O16_RS26670 (J6O16_26585) | 6578..7282 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O16_RS26675 (J6O16_26590) | 7337..7807 | + | 471 | Protein_11 | IS6 family transposase IS26 | Transposase |
| J6O16_RS26680 (J6O16_26595) | 8006..9388 | + | 1383 | WP_000426307.1 | diguanylate cyclase | - |
| J6O16_RS26685 (J6O16_26600) | 10085..10414 | + | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J6O16_RS26690 (J6O16_26605) | 10395..10676 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| J6O16_RS26695 (J6O16_26610) | 10954..11934 | + | 981 | WP_032216024.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O16_RS26700 (J6O16_26615) | 12217..12372 | + | 156 | WP_000074143.1 | hypothetical protein | - |
| J6O16_RS26705 (J6O16_26620) | 12421..13413 | + | 993 | WP_001145102.1 | hypothetical protein | - |
| J6O16_RS26710 (J6O16_26625) | 13561..14541 | - | 981 | WP_008503529.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O16_RS26715 (J6O16_26630) | 14595..14906 | + | 312 | WP_024191312.1 | hypothetical protein | - |
| J6O16_RS26720 (J6O16_26635) | 14996..16081 | - | 1086 | WP_001148851.1 | iron-containing alcohol dehydrogenase family protein | - |
| J6O16_RS26725 (J6O16_26640) | 16115..17272 | - | 1158 | WP_000217345.1 | alpha-hydroxy acid oxidase | - |
| J6O16_RS26730 (J6O16_26645) | 17269..17514 | - | 246 | WP_223598065.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| J6O16_RS26735 (J6O16_26650) | 17590..18294 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O16_RS26740 (J6O16_26655) | 18358..18768 | + | 411 | Protein_24 | lactate utilization protein C | - |
| J6O16_RS26745 (J6O16_26660) | 18818..19198 | - | 381 | Protein_25 | gluconate permease | - |
| J6O16_RS26750 (J6O16_26665) | 19409..19720 | + | 312 | WP_000558568.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| J6O16_RS26755 (J6O16_26670) | 19717..20136 | + | 420 | WP_000990392.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| J6O16_RS26765 | 21580..21780 | - | 201 | Protein_29 | hypothetical protein | - |
| J6O16_RS26770 (J6O16_26685) | 21942..22292 | + | 351 | WP_000928911.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| J6O16_RS26775 (J6O16_26690) | 22597..23073 | - | 477 | WP_000043177.1 | hypothetical protein | VF |
| J6O16_RS26780 (J6O16_26695) | 23197..24144 | - | 948 | Protein_32 | Tn3 family transposase ISEc63 | Transposase |
| J6O16_RS26785 (J6O16_26700) | 24210..24914 | + | 705 | WP_088765929.1 | IS6 family transposase IS26 | Transposase |
| J6O16_RS26790 (J6O16_26705) | 25298..25789 | + | 492 | WP_004206662.1 | hypothetical protein | - |
| J6O16_RS26795 (J6O16_26710) | 25850..26053 | + | 204 | WP_004213596.1 | HHA domain-containing protein | - |
| J6O16_RS26800 (J6O16_26715) | 26067..26288 | + | 222 | WP_016237028.1 | hypothetical protein | - |
| J6O16_RS26805 (J6O16_26720) | 26310..27278 | + | 969 | WP_142439200.1 | IS5 family transposase IS903B | Transposase |
| J6O16_RS26810 (J6O16_26725) | 27597..28622 | - | 1026 | WP_001101446.1 | IS110 family transposase ISAve1 | Transposase |
| J6O16_RS26815 (J6O16_26730) | 28774..30306 | + | 1533 | WP_001515706.1 | IS3 family transposase ISKpn38 | Transposase |
| J6O16_RS26820 (J6O16_26735) | 30435..31523 | + | 1089 | WP_001515707.1 | IS481 family transposase ISKpn28 | Transposase |
| J6O16_RS26825 (J6O16_26740) | 31474..31698 | - | 225 | Protein_41 | transposase | - |
| J6O16_RS26830 (J6O16_26745) | 31729..32379 | - | 651 | Protein_42 | IS66 family transposase ISCro1 | Transposase |
| J6O16_RS26835 (J6O16_26750) | 32442..33146 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O16_RS26840 (J6O16_26755) | 33907..35580 | + | 1674 | WP_000026497.1 | hypothetical protein | - |
| J6O16_RS26845 (J6O16_26760) | 35771..36077 | + | 307 | Protein_45 | type II toxin-antitoxin system ParD family antitoxin | - |
| J6O16_RS26850 | 36064..36394 | + | 331 | Protein_46 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J6O16_RS26855 (J6O16_26765) | 36726..37466 | + | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|