MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 86361 bp
Accession: NZ_CP081686 Location: 1..86361 Organism: Escherichia coli strain 0H23 Replicon: plasmid unnamed2
Accession: NZ_CP081686 Location: 1..86361 Organism: Escherichia coli strain 0H23 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O16_RS26140 (J6O16_26050) | 24..332 | + | 309 | WP_223598064.1 | hypothetical protein | - |
| J6O16_RS26145 (J6O16_26055) | 418..684 | + | 267 | WP_008324972.1 | hypothetical protein | - |
| J6O16_RS26150 (J6O16_26060) | 701..1522 | + | 822 | WP_008324970.1 | DUF932 domain-containing protein | - |
| J6O16_RS26155 (J6O16_26065) | 1558..2088 | - | 531 | WP_191219944.1 | hypothetical protein | VF |
| J6O16_RS26160 (J6O16_26070) | 2754..3146 | + | 393 | WP_008324961.1 | relaxosome protein TraM | - |
| J6O16_RS26165 (J6O16_26075) | 3179..3820 | - | 642 | WP_191219943.1 | Arc family DNA-binding protein | - |
| J6O16_RS26170 (J6O16_26080) | 4017..4370 | + | 354 | WP_104652443.1 | type IV conjugative transfer system pilin TraA | - |
| J6O16_RS26175 (J6O16_26085) | 4373..4675 | + | 303 | WP_104652433.1 | type IV conjugative transfer system protein TraL | - |
| J6O16_RS26180 (J6O16_26090) | 4681..5265 | + | 585 | WP_008324957.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| J6O16_RS26185 (J6O16_26095) | 5277..6017 | + | 741 | WP_223584557.1 | type-F conjugative transfer system secretin TraK | - |
| J6O16_RS26190 (J6O16_26100) | 6014..7411 | + | 1398 | WP_104652431.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| J6O16_RS26195 (J6O16_26105) | 7420..7902 | + | 483 | WP_137366884.1 | hypothetical protein | - |
| J6O16_RS26200 (J6O16_26110) | 7899..8303 | + | 405 | WP_223584549.1 | hypothetical protein | - |
| J6O16_RS26205 (J6O16_26115) | 8364..8921 | + | 558 | WP_104652359.1 | type IV conjugative transfer system lipoprotein TraV | - |
| J6O16_RS26210 (J6O16_26120) | 8918..11521 | + | 2604 | WP_104652358.1 | type IV secretion system protein TraC | - |
| J6O16_RS26215 (J6O16_26125) | 11518..11934 | + | 417 | WP_008325088.1 | type-F conjugative transfer system protein TrbI | - |
| J6O16_RS26220 (J6O16_26130) | 11931..12566 | + | 636 | WP_104652357.1 | type-F conjugative transfer system protein TraW | - |
| J6O16_RS26225 (J6O16_26135) | 12563..12883 | + | 321 | WP_008325090.1 | hypothetical protein | - |
| J6O16_RS26230 (J6O16_26140) | 12958..13503 | + | 546 | WP_191226008.1 | hypothetical protein | - |
| J6O16_RS26235 (J6O16_26145) | 13611..13832 | + | 222 | WP_104652355.1 | hypothetical protein | - |
| J6O16_RS26240 (J6O16_26150) | 13888..14211 | + | 324 | WP_008325099.1 | hypothetical protein | - |
| J6O16_RS26245 (J6O16_26155) | 14208..15206 | + | 999 | WP_008325100.1 | conjugal transfer pilus assembly protein TraU | - |
| J6O16_RS26250 (J6O16_26160) | 15217..15837 | + | 621 | WP_008325101.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| J6O16_RS26255 (J6O16_26165) | 15834..17690 | + | 1857 | WP_223584544.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| J6O16_RS26260 (J6O16_26170) | 17687..18469 | + | 783 | WP_223584540.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| J6O16_RS26265 (J6O16_26175) | 18480..18929 | + | 450 | WP_137366881.1 | hypothetical protein | - |
| J6O16_RS26270 (J6O16_26180) | 18926..19153 | + | 228 | WP_008324899.1 | hypothetical protein | - |
| J6O16_RS26275 (J6O16_26185) | 19143..19742 | + | 600 | WP_008324897.1 | F-type conjugal transfer protein TrbB | - |
| J6O16_RS26280 (J6O16_26190) | 19929..21293 | + | 1365 | WP_104652350.1 | conjugal transfer pilus assembly protein TraH | - |
| J6O16_RS26285 (J6O16_26195) | 21293..24526 | + | 3234 | WP_191219939.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| J6O16_RS26290 (J6O16_26200) | 24535..25245 | + | 711 | WP_223584538.1 | hypothetical protein | - |
| J6O16_RS26295 (J6O16_26205) | 25392..26123 | + | 732 | WP_223584537.1 | conjugal transfer complement resistance protein TraT | - |
| J6O16_RS26300 (J6O16_26210) | 26130..26441 | - | 312 | WP_191219936.1 | CcdB family protein | - |
| J6O16_RS26305 (J6O16_26215) | 26438..26686 | - | 249 | WP_191219935.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| J6O16_RS26310 (J6O16_26220) | 27187..28338 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| J6O16_RS26315 (J6O16_26225) | 28438..28746 | + | 309 | WP_193146064.1 | hypothetical protein | - |
| J6O16_RS26320 (J6O16_26230) | 28866..31397 | + | 2532 | WP_191226012.1 | type IV conjugative transfer system coupling protein TraD | - |
| J6O16_RS26325 (J6O16_26235) | 31394..36880 | + | 5487 | WP_191226010.1 | Multifunctional conjugation protein TraI | Relaxase |
| J6O16_RS26330 (J6O16_26240) | 36917..37720 | + | 804 | WP_191219957.1 | DsbA family protein | - |
| J6O16_RS26335 (J6O16_26245) | 37809..38132 | + | 324 | WP_008324877.1 | hypothetical protein | - |
| J6O16_RS26340 (J6O16_26250) | 38165..38713 | + | 549 | WP_191219959.1 | DUF2726 domain-containing protein | - |
| J6O16_RS26345 (J6O16_26255) | 39238..39381 | - | 144 | WP_001767846.1 | hypothetical protein | - |
| J6O16_RS26350 (J6O16_26260) | 39417..42104 | - | 2688 | WP_223584562.1 | autotransporter domain-containing protein | - |
| J6O16_RS26355 (J6O16_26265) | 42114..44513 | - | 2400 | WP_223584561.1 | Xanthan lyase | VF |
| J6O16_RS26360 (J6O16_26270) | 44532..45536 | - | 1005 | WP_012291304.1 | hypothetical protein | - |
| J6O16_RS26365 (J6O16_26275) | 45581..47038 | - | 1458 | WP_052750737.1 | DUF2264 domain-containing protein | - |
| J6O16_RS26370 (J6O16_26280) | 47072..48106 | - | 1035 | WP_012291312.1 | glycoside hydrolase family 88 protein | - |
| J6O16_RS26375 (J6O16_26285) | 48186..48623 | - | 438 | WP_012291315.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| J6O16_RS26380 (J6O16_26290) | 48633..49499 | - | 867 | WP_023247564.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| J6O16_RS26385 (J6O16_26295) | 49489..50259 | - | 771 | WP_012291321.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| J6O16_RS26390 (J6O16_26300) | 50279..50752 | - | 474 | WP_023247562.1 | PTS sugar transporter subunit IIB | - |
| J6O16_RS26395 (J6O16_26305) | 50865..51653 | - | 789 | WP_012291328.1 | DeoR family transcriptional regulator | - |
| J6O16_RS26400 (J6O16_26310) | 52203..53225 | - | 1023 | WP_016246530.1 | IS110 family transposase IS1618 | Transposase |
| J6O16_RS26405 | 53339..53479 | - | 141 | Protein_53 | arsenical pump-driving ATPase | - |
| J6O16_RS26410 (J6O16_26320) | 53599..54171 | - | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| J6O16_RS26415 (J6O16_26325) | 54335..54475 | + | 141 | WP_160185462.1 | Tn3 family transposase ISEc63 | Transposase |
| J6O16_RS26420 (J6O16_26330) | 54487..55191 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O16_RS26425 (J6O16_26335) | 55243..55599 | + | 357 | Protein_57 | IS91 family transposase ISMno23 | Transposase |
| J6O16_RS26430 (J6O16_26340) | 55922..56911 | - | 990 | WP_191221256.1 | RepB family plasmid replication initiator protein | - |
| J6O16_RS26435 (J6O16_26345) | 57726..57995 | + | 270 | WP_048213818.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| J6O16_RS26440 (J6O16_26350) | 57999..58529 | + | 531 | WP_048213819.1 | GNAT family N-acetyltransferase | Toxin Detail |
| J6O16_RS26445 (J6O16_26355) | 58614..59618 | - | 1005 | WP_048213820.1 | hypothetical protein | - |
| J6O16_RS26450 (J6O16_26360) | 59623..59868 | - | 246 | WP_048213821.1 | hypothetical protein | - |
| J6O16_RS26455 (J6O16_26365) | 60864..61250 | + | 387 | WP_059593784.1 | hypothetical protein | - |
| J6O16_RS26460 (J6O16_26370) | 61262..61795 | + | 534 | WP_065212827.1 | hypothetical protein | - |
| J6O16_RS26465 (J6O16_26375) | 61800..62579 | + | 780 | WP_050316692.1 | site-specific integrase | - |
| J6O16_RS26470 (J6O16_26380) | 62795..64345 | - | 1551 | WP_080402007.1 | SLC13 family permease | - |
| J6O16_RS26475 (J6O16_26385) | 64384..65382 | - | 999 | WP_059593788.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| J6O16_RS26480 (J6O16_26390) | 65405..66706 | - | 1302 | WP_059593790.1 | four-carbon acid sugar kinase family protein | - |
| J6O16_RS26485 (J6O16_26395) | 66739..67419 | - | 681 | WP_242658614.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| J6O16_RS26490 (J6O16_26400) | 67598..68596 | + | 999 | WP_059593794.1 | Arabinose 5-phosphate isomerase KdsD | VF |
| J6O16_RS26495 (J6O16_26405) | 69053..69709 | + | 657 | WP_059593848.1 | Protein SrpB | VF |
| J6O16_RS26500 (J6O16_26410) | 69907..70098 | - | 192 | WP_042313830.1 | hypothetical protein | - |
| J6O16_RS26505 (J6O16_26415) | 70609..71814 | + | 1206 | WP_059593797.1 | AAA family ATPase | - |
| J6O16_RS26510 (J6O16_26420) | 71814..72788 | + | 975 | WP_059593798.1 | ParB family protein | - |
| J6O16_RS26515 (J6O16_26425) | 72870..73052 | - | 183 | Protein_75 | DUF4113 domain-containing protein | - |
| J6O16_RS26520 (J6O16_26430) | 73056..73163 | + | 108 | Protein_76 | chromosome partitioning protein ParB | - |
| J6O16_RS26525 (J6O16_26435) | 73245..74519 | - | 1275 | WP_191221255.1 | Y-family DNA polymerase | - |
| J6O16_RS26530 (J6O16_26440) | 74519..74941 | - | 423 | WP_059593800.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| J6O16_RS26535 (J6O16_26445) | 75477..76412 | + | 936 | WP_059593802.1 | DUF1281 domain-containing protein | - |
| J6O16_RS26540 (J6O16_26450) | 76445..76792 | + | 348 | WP_059593804.1 | hypothetical protein | - |
| J6O16_RS26545 (J6O16_26460) | 77169..77849 | + | 681 | WP_058216376.1 | DNA methylase | - |
| J6O16_RS26550 (J6O16_26465) | 77849..78070 | + | 222 | WP_191221259.1 | hypothetical protein | - |
| J6O16_RS26555 (J6O16_26470) | 78081..78500 | + | 420 | WP_191221254.1 | DUF1380 family protein | - |
| J6O16_RS26560 (J6O16_26475) | 78556..78960 | + | 405 | WP_059593810.1 | DUF1380 family protein | - |
| J6O16_RS26565 (J6O16_26480) | 79028..79795 | + | 768 | WP_191221253.1 | hypothetical protein | - |
| J6O16_RS26570 (J6O16_26485) | 80213..80641 | + | 429 | WP_059593814.1 | antirestriction protein | - |
| J6O16_RS26575 (J6O16_26490) | 80660..81130 | + | 471 | WP_223584559.1 | DUF1380 family protein | - |
| J6O16_RS26580 (J6O16_26495) | 81174..81584 | + | 411 | WP_104652235.1 | DUF1380 domain-containing protein | - |
| J6O16_RS26585 (J6O16_26500) | 81598..81789 | + | 192 | WP_032934909.1 | hypothetical protein | - |
| J6O16_RS26590 (J6O16_26505) | 81958..82212 | + | 255 | WP_049040212.1 | DNA polymerase III subunit theta | - |
| J6O16_RS26595 | 82512..82660 | - | 149 | Protein_91 | hypothetical protein | - |
| J6O16_RS26600 (J6O16_26515) | 82964..83191 | + | 228 | WP_191221252.1 | hypothetical protein | - |
| J6O16_RS26605 (J6O16_26520) | 83285..83515 | + | 231 | WP_191221251.1 | hypothetical protein | - |
| J6O16_RS26610 (J6O16_26525) | 83567..84949 | + | 1383 | WP_191221250.1 | DUF3560 domain-containing protein | - |
| J6O16_RS26615 (J6O16_26530) | 84996..85559 | + | 564 | WP_191219947.1 | methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|