MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 86367 bp
Accession: NZ_CP081679 Location: 1..86367 Organism: Escherichia coli strain 0H15 Replicon: plasmid unnamed2
Accession: NZ_CP081679 Location: 1..86367 Organism: Escherichia coli strain 0H15 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O45_RS26150 (J6O45_26020) | 820..1377 | - | 558 | WP_104652359.1 | type IV conjugative transfer system lipoprotein TraV | - |
| J6O45_RS26155 (J6O45_26025) | 1438..1842 | - | 405 | WP_223584549.1 | hypothetical protein | - |
| J6O45_RS26160 (J6O45_26030) | 1839..2321 | - | 483 | WP_137366884.1 | hypothetical protein | - |
| J6O45_RS26165 (J6O45_26035) | 2330..3727 | - | 1398 | WP_104652431.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| J6O45_RS26170 (J6O45_26040) | 3724..4464 | - | 741 | WP_223584557.1 | type-F conjugative transfer system secretin TraK | - |
| J6O45_RS26175 (J6O45_26045) | 4476..5060 | - | 585 | WP_008324957.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| J6O45_RS26180 (J6O45_26050) | 5066..5368 | - | 303 | WP_104652433.1 | type IV conjugative transfer system protein TraL | - |
| J6O45_RS26185 (J6O45_26055) | 5371..5724 | - | 354 | WP_104652443.1 | type IV conjugative transfer system pilin TraA | - |
| J6O45_RS26190 (J6O45_26060) | 5921..6562 | + | 642 | WP_191219943.1 | Arc family DNA-binding protein | - |
| J6O45_RS26195 (J6O45_26065) | 6595..6987 | - | 393 | WP_008324961.1 | relaxosome protein TraM | - |
| J6O45_RS26200 (J6O45_26070) | 7653..8183 | + | 531 | WP_191219944.1 | hypothetical protein | VF |
| J6O45_RS26205 (J6O45_26075) | 8219..9040 | - | 822 | WP_008324970.1 | DUF932 domain-containing protein | - |
| J6O45_RS26210 (J6O45_26080) | 9057..9323 | - | 267 | WP_008324972.1 | hypothetical protein | - |
| J6O45_RS26215 (J6O45_26085) | 9409..9771 | - | 363 | WP_104652231.1 | hypothetical protein | - |
| J6O45_RS26220 (J6O45_26090) | 10550..11113 | - | 564 | WP_191219947.1 | methyltransferase | - |
| J6O45_RS26225 (J6O45_26095) | 11160..12542 | - | 1383 | WP_191221250.1 | DUF3560 domain-containing protein | - |
| J6O45_RS26230 (J6O45_26100) | 12594..12824 | - | 231 | WP_191221251.1 | hypothetical protein | - |
| J6O45_RS26235 (J6O45_26105) | 12918..13145 | - | 228 | WP_191221252.1 | hypothetical protein | - |
| J6O45_RS26240 | 13449..13597 | + | 149 | Protein_19 | hypothetical protein | - |
| J6O45_RS26245 (J6O45_26115) | 13897..14151 | - | 255 | WP_049040212.1 | DNA polymerase III subunit theta | - |
| J6O45_RS26250 (J6O45_26120) | 14320..14511 | - | 192 | WP_032934909.1 | hypothetical protein | - |
| J6O45_RS26255 (J6O45_26125) | 14525..14935 | - | 411 | WP_104652235.1 | DUF1380 domain-containing protein | - |
| J6O45_RS26260 (J6O45_26130) | 14979..15449 | - | 471 | WP_223584559.1 | DUF1380 family protein | - |
| J6O45_RS26265 (J6O45_26135) | 15468..15896 | - | 429 | WP_059593814.1 | antirestriction protein | - |
| J6O45_RS26270 (J6O45_26140) | 16314..17081 | - | 768 | WP_191221253.1 | hypothetical protein | - |
| J6O45_RS26275 (J6O45_26145) | 17149..17553 | - | 405 | WP_059593810.1 | DUF1380 family protein | - |
| J6O45_RS26280 (J6O45_26150) | 17609..18028 | - | 420 | WP_191221254.1 | DUF1380 family protein | - |
| J6O45_RS26285 (J6O45_26155) | 18039..18260 | - | 222 | WP_191221259.1 | hypothetical protein | - |
| J6O45_RS26290 (J6O45_26160) | 18260..18940 | - | 681 | WP_058216376.1 | DNA methylase | - |
| J6O45_RS26295 (J6O45_26165) | 19317..19664 | - | 348 | WP_059593804.1 | hypothetical protein | - |
| J6O45_RS26300 (J6O45_26170) | 19697..20632 | - | 936 | WP_059593802.1 | DUF1281 domain-containing protein | - |
| J6O45_RS26305 (J6O45_26175) | 21168..21590 | + | 423 | WP_059593800.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| J6O45_RS26310 (J6O45_26180) | 21590..22864 | + | 1275 | WP_191221255.1 | Y-family DNA polymerase | - |
| J6O45_RS26315 (J6O45_26185) | 22946..23053 | - | 108 | Protein_34 | chromosome partitioning protein ParB | - |
| J6O45_RS26320 (J6O45_26190) | 23057..23239 | + | 183 | Protein_35 | DUF4113 domain-containing protein | - |
| J6O45_RS26325 (J6O45_26195) | 23321..24295 | - | 975 | WP_059593798.1 | ParB family protein | - |
| J6O45_RS26330 (J6O45_26200) | 24295..25500 | - | 1206 | WP_059593797.1 | AAA family ATPase | - |
| J6O45_RS26335 (J6O45_26205) | 26011..26202 | + | 192 | WP_042313830.1 | hypothetical protein | - |
| J6O45_RS26340 (J6O45_26210) | 26400..27056 | - | 657 | WP_059593848.1 | Protein SrpB | VF |
| J6O45_RS26345 (J6O45_26215) | 27513..28511 | - | 999 | WP_059593794.1 | Arabinose 5-phosphate isomerase KdsD | VF |
| J6O45_RS26350 (J6O45_26220) | 28690..29370 | + | 681 | WP_242658614.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| J6O45_RS26355 (J6O45_26225) | 29403..30704 | + | 1302 | WP_059593790.1 | four-carbon acid sugar kinase family protein | - |
| J6O45_RS26360 (J6O45_26230) | 30727..31725 | + | 999 | WP_059593788.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| J6O45_RS26365 (J6O45_26235) | 31764..33314 | + | 1551 | WP_080402007.1 | SLC13 family permease | - |
| J6O45_RS26370 (J6O45_26240) | 33530..34309 | - | 780 | WP_050316692.1 | site-specific integrase | - |
| J6O45_RS26375 (J6O45_26245) | 34314..34847 | - | 534 | WP_065212827.1 | hypothetical protein | - |
| J6O45_RS26380 (J6O45_26250) | 34859..35245 | - | 387 | WP_059593784.1 | hypothetical protein | - |
| J6O45_RS26385 (J6O45_26255) | 36241..36486 | + | 246 | WP_048213821.1 | hypothetical protein | - |
| J6O45_RS26390 (J6O45_26260) | 36491..37495 | + | 1005 | WP_048213820.1 | hypothetical protein | - |
| J6O45_RS26395 (J6O45_26265) | 37580..38110 | - | 531 | WP_048213819.1 | GNAT family N-acetyltransferase | Toxin Detail |
| J6O45_RS26400 (J6O45_26270) | 38114..38383 | - | 270 | WP_048213818.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| J6O45_RS26405 (J6O45_26275) | 39198..40187 | + | 990 | WP_191221256.1 | RepB family plasmid replication initiator protein | - |
| J6O45_RS26410 (J6O45_26280) | 40510..40866 | - | 357 | Protein_53 | IS91 family transposase ISMno23 | Transposase |
| J6O45_RS26415 (J6O45_26285) | 40918..41622 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O45_RS26420 (J6O45_26290) | 41634..41774 | - | 141 | WP_160185462.1 | Tn3 family transposase ISEc63 | Transposase |
| J6O45_RS26425 (J6O45_26295) | 41938..42510 | + | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| J6O45_RS26430 | 42630..42770 | + | 141 | Protein_57 | arsenical pump-driving ATPase | - |
| J6O45_RS26435 (J6O45_26305) | 42884..43906 | + | 1023 | WP_016246530.1 | IS110 family transposase IS1618 | Transposase |
| J6O45_RS26440 (J6O45_26310) | 44456..45244 | + | 789 | WP_012291328.1 | DeoR family transcriptional regulator | - |
| J6O45_RS26445 (J6O45_26315) | 45357..45830 | + | 474 | WP_023247562.1 | PTS sugar transporter subunit IIB | - |
| J6O45_RS26450 (J6O45_26320) | 45850..46620 | + | 771 | WP_012291321.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| J6O45_RS26455 (J6O45_26325) | 46610..47476 | + | 867 | WP_023247564.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| J6O45_RS26460 (J6O45_26330) | 47486..47923 | + | 438 | WP_012291315.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| J6O45_RS26465 (J6O45_26335) | 48003..49037 | + | 1035 | WP_012291312.1 | glycoside hydrolase family 88 protein | - |
| J6O45_RS26470 (J6O45_26340) | 49071..50528 | + | 1458 | WP_052750737.1 | DUF2264 domain-containing protein | - |
| J6O45_RS26475 (J6O45_26345) | 50573..51577 | + | 1005 | WP_012291304.1 | hypothetical protein | - |
| J6O45_RS26480 (J6O45_26350) | 51596..53995 | + | 2400 | WP_223584561.1 | Xanthan lyase | VF |
| J6O45_RS26485 (J6O45_26355) | 54005..56692 | + | 2688 | WP_223584562.1 | autotransporter domain-containing protein | - |
| J6O45_RS26490 (J6O45_26360) | 56728..56871 | + | 144 | WP_001767846.1 | hypothetical protein | - |
| J6O45_RS26495 (J6O45_26365) | 57396..57944 | - | 549 | WP_191219959.1 | DUF2726 domain-containing protein | - |
| J6O45_RS26500 (J6O45_26370) | 57977..58300 | - | 324 | WP_008324877.1 | hypothetical protein | - |
| J6O45_RS26505 (J6O45_26375) | 58389..59192 | - | 804 | WP_191219957.1 | DsbA family protein | - |
| J6O45_RS26510 (J6O45_26380) | 59229..64715 | - | 5487 | WP_191226010.1 | Multifunctional conjugation protein TraI | Relaxase |
| J6O45_RS26515 (J6O45_26385) | 64712..67243 | - | 2532 | WP_191226012.1 | type IV conjugative transfer system coupling protein TraD | - |
| J6O45_RS26520 (J6O45_26390) | 67363..67671 | - | 309 | WP_193146064.1 | hypothetical protein | - |
| J6O45_RS26525 (J6O45_26395) | 67771..68922 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| J6O45_RS26530 (J6O45_26400) | 69423..69671 | + | 249 | WP_191219935.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| J6O45_RS26535 (J6O45_26405) | 69668..69979 | + | 312 | WP_191219936.1 | CcdB family protein | - |
| J6O45_RS26540 (J6O45_26410) | 69986..70717 | - | 732 | WP_223584537.1 | conjugal transfer complement resistance protein TraT | - |
| J6O45_RS26545 (J6O45_26415) | 70864..71574 | - | 711 | WP_223584538.1 | hypothetical protein | - |
| J6O45_RS26550 (J6O45_26420) | 71583..74816 | - | 3234 | WP_191219939.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| J6O45_RS26555 (J6O45_26425) | 74816..76180 | - | 1365 | WP_104652350.1 | conjugal transfer pilus assembly protein TraH | - |
| J6O45_RS26560 (J6O45_26430) | 76367..76966 | - | 600 | WP_008324897.1 | F-type conjugal transfer protein TrbB | - |
| J6O45_RS26565 (J6O45_26435) | 76956..77183 | - | 228 | WP_008324899.1 | hypothetical protein | - |
| J6O45_RS26570 (J6O45_26440) | 77180..77629 | - | 450 | WP_137366881.1 | hypothetical protein | - |
| J6O45_RS26575 (J6O45_26445) | 77640..78422 | - | 783 | WP_223584540.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| J6O45_RS26580 (J6O45_26450) | 78419..80275 | - | 1857 | WP_223584544.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| J6O45_RS26585 (J6O45_26455) | 80272..80892 | - | 621 | WP_008325101.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| J6O45_RS26590 (J6O45_26460) | 80903..81901 | - | 999 | WP_008325100.1 | conjugal transfer pilus assembly protein TraU | - |
| J6O45_RS26595 (J6O45_26465) | 81898..82221 | - | 324 | WP_008325099.1 | hypothetical protein | - |
| J6O45_RS26600 (J6O45_26470) | 82277..82498 | - | 222 | WP_104652355.1 | hypothetical protein | - |
| J6O45_RS26605 (J6O45_26475) | 82606..83151 | - | 546 | WP_191226008.1 | hypothetical protein | - |
| J6O45_RS26610 (J6O45_26480) | 83226..83546 | - | 321 | WP_008325090.1 | hypothetical protein | - |
| J6O45_RS26615 (J6O45_26485) | 83543..84178 | - | 636 | WP_104652357.1 | type-F conjugative transfer system protein TraW | - |
| J6O45_RS26620 (J6O45_26490) | 84175..84591 | - | 417 | WP_008325088.1 | type-F conjugative transfer system protein TrbI | - |
| J6O45_RS27160 | 84588..86282 | - | 1695 | WP_263295287.1 | type IV secretion system protein TraC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|