MGE detailed information
MGE type: Genomic_island MGE length: 47651 bp
Accession: NZ_CP081677 Location: 4440875..4488525 Organism: Escherichia coli strain 0H15 Replicon: chromosome
Accession: NZ_CP081677 Location: 4440875..4488525 Organism: Escherichia coli strain 0H15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O45_RS21770 (4436502) | 4436502..4436840 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| J6O45_RS21775 (4436816) | 4436816..4438513 | + | 1698 | WP_000068974.1 | protein-disulfide reductase DsbD | - |
| J6O45_RS21780 (4438550) | 4438550..4439125 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| J6O45_RS21790 (4439505) | 4439505..4440767 | + | 1263 | WP_001218854.1 | integrase arm-type DNA-binding domain-containing protein | - |
| J6O45_RS21800 (4441721) | 4441721..4442242 | + | 522 | Protein_4271 | hypothetical protein ; Integrase | Integrase |
| J6O45_RS21805 (4442312) | 4442312..4442548 | + | 237 | WP_024195749.1 | hypothetical protein | - |
| J6O45_RS21810 (4442564) | 4442564..4442836 | + | 273 | WP_001547725.1 | hypothetical protein | - |
| J6O45_RS21815 (4442867) | 4442867..4443076 | - | 210 | WP_001547726.1 | hypothetical protein | - |
| J6O45_RS21820 (4443173) | 4443173..4444210 | - | 1038 | WP_001547728.1 | major capsid protein | - |
| J6O45_RS21825 (4444235) | 4444235..4444579 | - | 345 | WP_001547729.1 | hypothetical protein | - |
| J6O45_RS21830 (4444743) | 4444743..4445052 | - | 310 | Protein_4277 | integrase core domain-containing protein | - |
| J6O45_RS21835 (4445069) | 4445069..4446145 | - | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| J6O45_RS21840 (4446427) | 4446427..4446606 | - | 180 | Protein_4279 | DDE-type integrase/transposase/recombinase | - |
| J6O45_RS21845 (4446687) | 4446687..4448195 | - | 1509 | WP_032142258.1 | group II intron reverse transcriptase/maturase | - |
| J6O45_RS21850 (4448868) | 4448868..4449577 | - | 710 | Protein_4281 | IS3 family transposase IS3 | Transposase |
| J6O45_RS21855 (4449674) | 4449674..4450201 | + | 528 | WP_223584368.1 | HNH endonuclease | - |
| J6O45_RS27115 (4450545) | 4450545..4450622 | + | 78 | Protein_4283 | hypothetical protein | - |
| J6O45_RS21865 (4450688) | 4450688..4451728 | + | 1041 | WP_223584496.1 | IS66 family transposase ISEc22 | Transposase |
| J6O45_RS21870 (4451771) | 4451771..4452523 | + | 753 | Protein_4285 | IS30 family transposase IS30D | Transposase |
| J6O45_RS21875 (4452536) | 4452536..4452793 | - | 258 | Protein_4286 | IS3 family transposase ISEc52 | Transposase |
| J6O45_RS21880 (4452864) | 4452864..4453108 | + | 245 | Protein_4287 | IS30 family transposase | - |
| J6O45_RS21885 (4453645) | 4453645..4456938 | - | 3294 | WP_223584370.1 | Outer membrane protein IcsA autotransporter | VF |
| J6O45_RS21890 (4457118) | 4457118..4458098 | + | 981 | WP_001547740.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O45_RS21895 (4458281) | 4458281..4459255 | + | 975 | WP_000130706.1 | porphobilinogen synthase | - |
| J6O45_RS21900 (4459383) | 4459383..4461107 | + | 1725 | WP_001547741.1 | lysophospholipid acyltransferase family protein | - |
| J6O45_RS21905 (4461175) | 4461175..4462026 | - | 852 | WP_001547743.1 | taurine dioxygenase | - |
| J6O45_RS21910 (4462023) | 4462023..4462850 | - | 828 | WP_001547744.1 | taurine ABC transporter permease TauC | - |
| J6O45_RS21915 (4462847) | 4462847..4463614 | - | 768 | WP_000932310.1 | Taurine import ATP-binding protein TauB | VF |
| J6O45_RS21920 (4463625) | 4463625..4464587 | - | 963 | WP_001018397.1 | taurine ABC transporter substrate-binding protein | - |
| J6O45_RS21925 (4465261) | 4465261..4466193 | - | 933 | WP_000081354.1 | homocysteine S-methyltransferase | - |
| J6O45_RS21930 (4466180) | 4466180..4467580 | - | 1401 | WP_001194698.1 | S-methylmethionine permease | - |
| J6O45_RS21935 (4467944) | 4467944..4469053 | + | 1110 | WP_001211967.1 | AI-2E family transporter | - |
| J6O45_RS21940 (4469173) | 4469173..4470957 | + | 1785 | WP_001217015.1 | diguanylate cyclase | - |
| J6O45_RS21945 (4470970) | 4470970..4471374 | - | 405 | WP_000334957.1 | Regulatory protein SoxS | VF |
| J6O45_RS21950 (4471498) | 4471498..4472142 | - | 645 | WP_001547746.1 | HTH-type transcriptional regulator AcrR | VF |
| J6O45_RS21960 (4473229) | 4473229..4473465 | + | 237 | WP_001144031.1 | protein YpjK | - |
| J6O45_RS21965 (4473465) | 4473465..4473908 | + | 444 | WP_001547764.1 | lipoprotein YafY | - |
| J6O45_RS21970 (4473931) | 4473931..4474398 | + | 468 | WP_001547765.1 | protein YkfB | - |
| J6O45_RS21975 (4474475) | 4474475..4474714 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O45_RS21980 (4474812) | 4474812..4475270 | + | 459 | WP_001548150.1 | antirestriction protein | - |
| J6O45_RS21985 (4475286) | 4475286..4475762 | + | 477 | WP_000811693.1 | RadC family protein | - |
| J6O45_RS21990 (4475771) | 4475771..4475992 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O45_RS21995 (4476011) | 4476011..4476337 | + | 327 | WP_001548930.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O45_RS22000 (4476427) | 4476427..4476804 | + | 378 | WP_000854726.1 | TA system toxin CbtA family protein | Toxin Detail |
| J6O45_RS22005 (4476801) | 4476801..4477289 | + | 489 | WP_001547769.1 | DUF5983 family protein | - |
| J6O45_RS22010 (4477301) | 4477301..4477498 | + | 198 | WP_000839269.1 | DUF957 domain-containing protein | - |
| J6O45_RS22015 (4477583) | 4477583..4478425 | + | 843 | WP_001547770.1 | DUF4942 domain-containing protein | - |
| J6O45_RS22020 (4479174) | 4479174..4480712 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| J6O45_RS22025 (4481078) | 4481078..4482412 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| J6O45_RS22030 (4482492) | 4482492..4484639 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| J6O45_RS22035 (4484698) | 4484698..4486155 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| J6O45_RS22040 (4486392) | 4486392..4487909 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| J6O45_RS22045 (4488028) | 4488028..4488201 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| J6O45_RS22050 (4488229) | 4488229..4488525 | - | 297 | WP_001425728.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| J6O45_RS22055 (4488752) | 4488752..4489024 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| J6O45_RS22060 (4489036) | 4489036..4489266 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| J6O45_RS22065 (4489447) | 4489447..4491078 | + | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| J6O45_RS22070 (4491075) | 4491075..4491794 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|