MGE detailed information
MGE type: Genomic_island MGE length: 38363 bp
Accession: NZ_CP081677 Location: 3876175..3914537 Organism: Escherichia coli strain 0H15 Replicon: chromosome
Accession: NZ_CP081677 Location: 3876175..3914537 Organism: Escherichia coli strain 0H15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O45_RS18920 (3871832) | 3871832..3872257 | + | 426 | Protein_3711 | IS3 family transposase | - |
| J6O45_RS18925 (3872930) | 3872930..3874438 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| J6O45_RS18930 (3874519) | 3874519..3874698 | + | 180 | Protein_3713 | DDE-type integrase/transposase/recombinase | - |
| J6O45_RS18935 (3874980) | 3874980..3876056 | + | 1077 | WP_000227969.1 | IS110 family transposase | - |
| J6O45_RS18940 (3876073) | 3876073..3876381 | + | 309 | Protein_3715 | IS3 family transposase ISLad1 | Transposase |
| J6O45_RS18945 (3876279) | 3876279..3877577 | - | 1299 | WP_000342159.1 | IS256 family transposase ISSoEn2 | Transposase |
| J6O45_RS18950 (3877795) | 3877795..3877959 | - | 165 | Protein_3717 | transposase domain-containing protein | - |
| J6O45_RS18955 (3877904) | 3877904..3878167 | - | 264 | WP_001247776.1 | transposase | - |
| J6O45_RS18960 (3878182) | 3878182..3878445 | + | 264 | WP_001549018.1 | hypothetical protein | - |
| J6O45_RS18965 (3878674) | 3878674..3878955 | + | 282 | WP_000643628.1 | helix-turn-helix domain-containing protein | - |
| J6O45_RS18970 (3878990) | 3878990..3879559 | + | 570 | WP_000350435.1 | Spore protein SP21 | VF |
| J6O45_RS18975 (3879665) | 3879665..3882547 | + | 2883 | WP_000101612.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| J6O45_RS18980 (3882547) | 3882547..3882738 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| J6O45_RS18985 (3882799) | 3882799..3884526 | + | 1728 | WP_000412528.1 | FtsH/Yme1/Tma family ATP-dependent metallopeptidase | - |
| J6O45_RS18990 (3884614) | 3884614..3885072 | + | 459 | WP_001275372.1 | Spore protein SP21 | VF |
| J6O45_RS18995 (3885095) | 3885095..3886009 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| J6O45_RS19000 (3886112) | 3886112..3886999 | + | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| J6O45_RS19005 (3887089) | 3887089..3887700 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| J6O45_RS19010 (3887780) | 3887780..3888925 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| J6O45_RS19015 (3888915) | 3888915..3889355 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| J6O45_RS19020 (3889359) | 3889359..3891074 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| J6O45_RS19025 (3891071) | 3891071..3891568 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| J6O45_RS19030 (3891546) | 3891546..3892511 | + | 966 | WP_000196689.1 | zinc metalloprotease HtpX | - |
| J6O45_RS19035 (3892536) | 3892536..3893687 | + | 1152 | WP_000323729.1 | Putative serine protease HhoB | VF |
| J6O45_RS19040 (3893912) | 3893912..3894481 | - | 570 | Protein_3735 | IS5 family transposase ISPa16 | Transposase |
| J6O45_RS19045 (3895603) | 3895603..3896466 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| J6O45_RS19050 (3896558) | 3896558..3897379 | + | 822 | WP_000197388.1 | DUF932 domain-containing protein | - |
| J6O45_RS19055 (3897596) | 3897596..3898297 | + | 702 | WP_000189411.1 | WYL domain-containing protein | - |
| J6O45_RS19060 (3898338) | 3898338..3898574 | + | 237 | WP_001144031.1 | protein YpjK | - |
| J6O45_RS19065 (3898574) | 3898574..3899017 | + | 444 | WP_001547764.1 | lipoprotein YafY | - |
| J6O45_RS19070 (3899040) | 3899040..3899507 | + | 468 | WP_001547765.1 | protein YkfB | - |
| J6O45_RS19075 (3899584) | 3899584..3899823 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O45_RS19080 (3899921) | 3899921..3900379 | + | 459 | WP_001548150.1 | antirestriction protein | - |
| J6O45_RS19085 (3900395) | 3900395..3900871 | + | 477 | WP_000811693.1 | RadC family protein | - |
| J6O45_RS19090 (3900880) | 3900880..3901101 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O45_RS19095 (3901120) | 3901120..3901437 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O45_RS19100 (3901458) | 3901458..3901799 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| J6O45_RS19105 (3902620) | 3902620..3904086 | - | 1467 | WP_000723924.1 | hypothetical protein | - |
| J6O45_RS19110 (3904402) | 3904402..3904821 | - | 420 | WP_001333214.1 | hypothetical protein | - |
| J6O45_RS19115 (3905035) | 3905035..3905121 | - | 87 | Protein_3750 | capsid protein | - |
| J6O45_RS19120 (3905326) | 3905326..3906099 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| J6O45_RS19125 (3906160) | 3906160..3906714 | - | 555 | WP_000905043.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| J6O45_RS19130 (3906744) | 3906744..3907313 | + | 570 | WP_002431159.1 | hypothetical protein | - |
| J6O45_RS19135 (3907313) | 3907313..3907906 | + | 594 | WP_000613358.1 | tail fiber assembly protein | - |
| J6O45_RS19140 (3907878) | 3907878..3908321 | - | 444 | WP_000978831.1 | tail fiber assembly protein | - |
| J6O45_RS19145 (3908321) | 3908321..3908944 | - | 624 | WP_000554682.1 | hypothetical protein | - |
| J6O45_RS19150 (3908948) | 3908948..3909532 | - | 585 | WP_016243480.1 | YmfQ family protein | - |
| J6O45_RS19155 (3909523) | 3909523..3910581 | - | 1059 | WP_016243479.1 | baseplate J/gp47 family protein | - |
| J6O45_RS19160 (3910568) | 3910568..3910993 | - | 426 | WP_042027905.1 | phage GP46 family protein | - |
| J6O45_RS19165 (3910993) | 3910993..3911541 | - | 549 | WP_001542670.1 | phage baseplate assembly protein V | - |
| J6O45_RS19170 (3911541) | 3911541..3912620 | - | 1080 | WP_016243477.1 | phage tail protein | - |
| J6O45_RS19175 (3912617) | 3912617..3913945 | - | 1329 | WP_016243476.1 | DNA circularization N-terminal domain-containing protein | - |
| J6O45_RS19180 (3914007) | 3914007..3914537 | - | 531 | WP_000679479.1 | hypothetical protein | - |
| J6O45_RS19185 (3914629) | 3914629..3916461 | - | 1833 | WP_016243475.1 | phage tail tape measure protein | - |
| J6O45_RS19190 (3916603) | 3916603..3916872 | - | 270 | WP_000661051.1 | phage tail assembly protein | - |
| J6O45_RS19195 (3916872) | 3916872..3917228 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| J6O45_RS19200 (3917228) | 3917228..3918724 | - | 1497 | WP_001759749.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| J6O45_RS19205 (3918708) | 3918708..3918878 | - | 171 | WP_016243474.1 | DUF2635 domain-containing protein | - |
| J6O45_RS19210 (3918887) | 3918887..3919447 | - | 561 | WP_016243473.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|