MGE detailed information
MGE type: Prophage MGE length: 81958 bp
Accession: NZ_CP081677 Location: 1187570..1269527 Organism: Escherichia coli strain 0H15 Replicon: chromosome
Accession: NZ_CP081677 Location: 1187570..1269527 Organism: Escherichia coli strain 0H15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O45_RS05805 (1186221) | 1186221..1186844 | + | 624 | WP_016243807.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| J6O45_RS05810 (1186848) | 1186848..1187537 | + | 690 | WP_016243806.1 | hypothetical protein | - |
| J6O45_RS05815 (1187570) | 1187570..1188739 | - | 1170 | WP_016243805.1 | Putative defective protein IntQ ; Integrase | Integrase |
| J6O45_RS05820 (1188700) | 1188700..1188906 | - | 207 | WP_001331174.1 | hypothetical protein | - |
| J6O45_RS05825 (1188966) | 1188966..1189181 | - | 216 | WP_001331173.1 | hypothetical protein | - |
| J6O45_RS05830 (1189178) | 1189178..1189540 | - | 363 | WP_001222408.1 | phage protein | - |
| J6O45_RS05835 (1189531) | 1189531..1190067 | - | 537 | WP_000008202.1 | 5'-deoxynucleotidase | - |
| J6O45_RS05840 (1190195) | 1190195..1191019 | - | 825 | WP_000081294.1 | YfdQ family protein | - |
| J6O45_RS05845 (1191084) | 1191084..1191446 | - | 363 | WP_000135680.1 | protein YfdP | - |
| J6O45_RS05850 (1191461) | 1191461..1191771 | - | 311 | Protein_1144 | hypothetical protein | - |
| J6O45_RS05855 (1192047) | 1192047..1192322 | - | 276 | WP_021563905.1 | hypothetical protein | - |
| J6O45_RS05860 (1192529) | 1192529..1193155 | - | 627 | WP_000450737.1 | LexA family transcriptional regulator | - |
| J6O45_RS05865 (1193253) | 1193253..1193453 | + | 201 | WP_000205494.1 | Cro/CI family transcriptional regulator | - |
| J6O45_RS05870 (1193491) | 1193491..1194048 | + | 558 | WP_000515869.1 | protein YmfL | - |
| J6O45_RS05875 (1194224) | 1194224..1194403 | + | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| J6O45_RS05880 (1194393) | 1194393..1195334 | + | 942 | WP_000104954.1 | helix-turn-helix domain-containing protein | - |
| J6O45_RS05885 (1195331) | 1195331..1195825 | + | 495 | WP_077125183.1 | PerC family transcriptional regulator | - |
| J6O45_RS05890 (1195825) | 1195825..1196478 | + | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| J6O45_RS05895 (1196475) | 1196475..1196801 | + | 327 | WP_000210170.1 | LexA family transcriptional regulator | - |
| J6O45_RS05900 (1196798) | 1196798..1197187 | + | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| J6O45_RS05905 (1197207) | 1197207..1198016 | + | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| J6O45_RS05910 (1198024) | 1198024..1199013 | + | 990 | WP_061157959.1 | DUF968 domain-containing protein | - |
| J6O45_RS05915 (1199031) | 1199031..1199372 | + | 342 | WP_001205460.1 | antiterminator Q family protein | - |
| J6O45_RS05920 (1199385) | 1199385..1199933 | - | 549 | WP_001131905.1 | hypothetical protein | - |
| J6O45_RS05925 (1199920) | 1199920..1200846 | - | 927 | WP_000868396.1 | hypothetical protein | - |
| J6O45_RS05930 (1201027) | 1201027..1201314 | + | 288 | WP_223276187.1 | hypothetical protein | - |
| J6O45_RS05935 (1201465) | 1201465..1202517 | + | 1053 | WP_016243801.1 | site-specific DNA-methyltransferase | - |
| J6O45_RS05940 (1202585) | 1202585..1202800 | + | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| J6O45_RS05945 (1202800) | 1202800..1203297 | + | 498 | WP_001135250.1 | lysozyme RrrD | - |
| J6O45_RS27065 (1203294) | 1203294..1203761 | + | 468 | WP_016243800.1 | lysis protein | - |
| J6O45_RS05960 (1203749) | 1203749..1203901 | + | 153 | WP_001139675.1 | hypothetical protein | - |
| J6O45_RS05965 (1204043) | 1204043..1204219 | - | 177 | WP_001205130.1 | hypothetical protein | - |
| J6O45_RS05970 (1204577) | 1204577..1205071 | + | 495 | WP_000373425.1 | DUF1441 family protein | - |
| J6O45_RS05975 (1205071) | 1205071..1207173 | + | 2103 | WP_023307630.1 | phage terminase large subunit family protein | - |
| J6O45_RS05980 (1207170) | 1207170..1207382 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| J6O45_RS05985 (1207382) | 1207382..1208890 | + | 1509 | WP_016243798.1 | phage portal protein | - |
| J6O45_RS05990 (1208835) | 1208835..1210862 | + | 2028 | WP_016243797.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| J6O45_RS05995 (1210949) | 1210949..1211272 | + | 324 | WP_001097050.1 | DUF2190 family protein | - |
| J6O45_RS06000 (1211265) | 1211265..1211540 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| J6O45_RS06005 (1211552) | 1211552..1212130 | + | 579 | WP_000677102.1 | phage tail protein | - |
| J6O45_RS06010 (1212127) | 1212127..1212528 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| J6O45_RS06015 (1212539) | 1212539..1213282 | + | 744 | WP_000211129.1 | phage tail protein | - |
| J6O45_RS06020 (1213343) | 1213343..1213729 | + | 387 | WP_001300035.1 | phage minor tail protein G | - |
| J6O45_RS06025 (1213738) | 1213738..1214067 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| J6O45_RS06030 (1214039) | 1214039..1217104 | + | 3066 | WP_052994248.1 | phage tail tape measure protein | - |
| J6O45_RS06035 (1217104) | 1217104..1217433 | + | 330 | WP_000447253.1 | phage tail protein | - |
| J6O45_RS06040 (1217443) | 1217443..1218141 | + | 699 | WP_104457560.1 | phage minor tail protein L | - |
| J6O45_RS06045 (1218147) | 1218147..1218890 | + | 744 | WP_223584383.1 | C40 family peptidase | - |
| J6O45_RS06050 (1218788) | 1218788..1219435 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| J6O45_RS06055 (1219496) | 1219496..1222993 | + | 3498 | WP_016243793.1 | host specificity protein J | - |
| J6O45_RS06060 (1223064) | 1223064..1223663 | + | 600 | WP_001233071.1 | Outer membrane protein X | VF |
| J6O45_RS06065 (1223728) | 1223728..1226688 | + | 2961 | WP_000279163.1 | phage tail protein | - |
| J6O45_RS06070 (1226688) | 1226688..1227272 | + | 585 | WP_016243792.1 | tail fiber assembly protein | - |
| J6O45_RS06075 (1227342) | 1227342..1228115 | - | 774 | WP_000355482.1 | hypothetical protein | - |
| J6O45_RS06080 (1228522) | 1228522..1229955 | + | 1434 | WP_001288444.1 | DNA cytosine methyltransferase | - |
| J6O45_RS06085 (1229990) | 1229990..1231204 | - | 1215 | WP_012602456.1 | type II restriction endonuclease | - |
| J6O45_RS06090 (1231634) | 1231634..1231963 | - | 330 | WP_016243791.1 | TA system toxin CbtA family protein | Toxin Detail |
| J6O45_RS06095 (1231984) | 1231984..1232304 | - | 321 | WP_016243790.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| J6O45_RS06100 (1232322) | 1232322..1232543 | - | 222 | WP_016243789.1 | DUF987 domain-containing protein | - |
| J6O45_RS06105 (1232552) | 1232552..1233034 | - | 483 | WP_016243788.1 | DNA repair protein RadC | - |
| J6O45_RS06110 (1233043) | 1233043..1233501 | - | 459 | WP_016243787.1 | antirestriction protein | - |
| J6O45_RS06115 (1233664) | 1233664..1233755 | - | 92 | Protein_1196 | DUF905 domain-containing protein | - |
| J6O45_RS06120 (1233989) | 1233989..1234725 | + | 737 | Protein_1197 | IS3 family transposase IS629 | Transposase |
| J6O45_RS06125 (1235398) | 1235398..1236906 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| J6O45_RS06130 (1236990) | 1236990..1237469 | + | 480 | Protein_1199 | IS3 family transposase ISEc25 | Transposase |
| J6O45_RS06135 (1237700) | 1237700..1238140 | - | 441 | WP_016243785.1 | hypothetical protein | - |
| J6O45_RS06140 (1238486) | 1238486..1240108 | + | 1623 | WP_016243784.1 | hypothetical protein | - |
| J6O45_RS06145 (1240730) | 1240730..1241197 | - | 468 | WP_016243783.1 | protein YfjT | - |
| J6O45_RS06150 (1241221) | 1241221..1241664 | - | 444 | WP_016243782.1 | hypothetical protein | - |
| J6O45_RS06155 (1241654) | 1241654..1241899 | - | 246 | WP_016243781.1 | protein YpjK | - |
| J6O45_RS06160 (1241940) | 1241940..1242641 | - | 702 | WP_016243780.1 | WYL domain-containing protein | - |
| J6O45_RS06165 (1242858) | 1242858..1243679 | - | 822 | WP_016243779.1 | DUF932 domain-containing protein | - |
| J6O45_RS06170 (1243771) | 1243771..1244634 | - | 864 | WP_016243778.1 | GTPase family protein | - |
| J6O45_RS06175 (1245062) | 1245062..1245967 | + | 906 | WP_016243777.1 | WYL domain-containing protein | - |
| J6O45_RS06180 (1245967) | 1245967..1249245 | + | 3279 | WP_016243776.1 | helicase-related protein | - |
| J6O45_RS06185 (1249242) | 1249242..1249943 | + | 702 | WP_115186673.1 | DUF4391 domain-containing protein | - |
| J6O45_RS06190 (1249940) | 1249940..1252642 | + | 2703 | WP_115186674.1 | ATP-binding domain-containing protein | - |
| J6O45_RS06195 (1252717) | 1252717..1253409 | + | 693 | WP_223584384.1 | site-specific DNA-methyltransferase | - |
| J6O45_RS06200 (1253366) | 1253366..1254517 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| J6O45_RS06205 (1254576) | 1254576..1255910 | + | 1335 | WP_250112417.1 | DNA methyltransferase | - |
| J6O45_RS06210 (1255921) | 1255921..1258992 | + | 3072 | WP_115186676.1 | DEAD/DEAH box helicase family protein | - |
| J6O45_RS06215 (1259312) | 1259312..1261963 | + | 2652 | WP_115186677.1 | AAA family ATPase | - |
| J6O45_RS06220 (1261984) | 1261984..1262181 | + | 198 | WP_016243766.1 | ATP-binding protein | - |
| J6O45_RS06225 (1262185) | 1262185..1262865 | + | 681 | WP_016243765.1 | ATP-binding protein | - |
| J6O45_RS06230 (1262953) | 1262953..1263216 | + | 264 | WP_223584385.1 | ATP-binding protein | - |
| J6O45_RS06235 (1263293) | 1263293..1263913 | - | 621 | WP_016243764.1 | inovirus Gp2 family protein | - |
| J6O45_RS06240 (1264142) | 1264142..1265370 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| J6O45_RS06245 (1265492) | 1265492..1266889 | - | 1398 | WP_024191360.1 | YfjI family protein | - |
| J6O45_RS06250 (1267012) | 1267012..1267224 | - | 213 | WP_001549567.1 | AlpA family transcriptional regulator | - |
| J6O45_RS06255 (1267350) | 1267350..1268228 | + | 879 | WP_016243762.1 | hypothetical protein | - |
| J6O45_RS06260 (1268286) | 1268286..1269527 | - | 1242 | WP_016243761.1 | Prophage integrase IntA ; Integrase | Integrase |
| J6O45_RS06270 (1270308) | 1270308..1270790 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| J6O45_RS06275 (1270961) | 1270961..1271398 | + | 438 | WP_001341638.1 | type II toxin-antitoxin system toxin RatA | - |
| J6O45_RS06280 (1271388) | 1271388..1271678 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| J6O45_RS06285 (1271740) | 1271740..1272081 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| J6O45_RS06290 (1272230) | 1272230..1273891 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|