MGE detailed information
MGE type: Genomic_island MGE length: 16665 bp
Accession: NZ_CP081489 Location: 4216655..4233319 Organism: Escherichia coli BL21(DE3) Replicon: chromosome
Accession: NZ_CP081489 Location: 4216655..4233319 Organism: Escherichia coli BL21(DE3) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5T46_RS20270 (4211937) | 4211937..4212911 | + | 975 | WP_001300813.1 | porphobilinogen synthase | - |
| K5T46_RS20275 (4213018) | 4213018..4213869 | - | 852 | WP_000004024.1 | taurine dioxygenase | - |
| K5T46_RS20280 (4213866) | 4213866..4214693 | - | 828 | WP_000114585.1 | taurine ABC transporter permease TauC | - |
| K5T46_RS20285 (4214690) | 4214690..4215457 | - | 768 | WP_000939399.1 | taurine ABC transporter ATP-binding subunit | - |
| K5T46_RS20290 (4215470) | 4215470..4216432 | - | 963 | WP_001018416.1 | taurine ABC transporter substrate-binding protein | - |
| K5T46_RS20295 (4216637) | 4216637..4217008 | + | 372 | WP_012777340.1 | hypothetical protein | - |
| K5T46_RS20300 (4217439) | 4217439..4218575 | + | 1137 | WP_221840786.1 | ISAs1 family transposase ISEc1 | Transposase |
| K5T46_RS20305 (4218616) | 4218616..4219386 | - | 771 | WP_001118052.1 | 2-oxoglutaramate amidase | - |
| K5T46_RS20310 (4219567) | 4219567..4220013 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| K5T46_RS20315 (4220056) | 4220056..4222500 | - | 2445 | WP_000973107.1 | Acyl-coenzyme A dehydrogenase | VF |
| K5T46_RS20320 (4222740) | 4222740..4223318 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| K5T46_RS20325 (4223524) | 4223524..4224291 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| K5T46_RS20330 (4224262) | 4224262..4225002 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| K5T46_RS20335 (4225158) | 4225158..4225436 | - | 279 | WP_000615981.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| K5T46_RS20340 (4225439) | 4225439..4225699 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| K5T46_RS20345 (4225885) | 4225885..4226658 | + | 774 | WP_001353765.1 | Murein DD-endopeptidase MepH | VF |
| K5T46_RS20350 (4226834) | 4226834..4227331 | + | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| K5T46_RS20355 (4227547) | 4227547..4229259 | - | 1713 | Protein_4014 | Flagellar biosynthesis protein FlhA | VF |
| K5T46_RS20360 (4229231) | 4229231..4230016 | + | 786 | WP_000207564.1 | Chemotaxis protein LafU | VF |
| K5T46_RS20365 (4230087) | 4230087..4231142 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| K5T46_RS20370 (4231194) | 4231194..4231487 | + | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| K5T46_RS20375 (4231490) | 4231490..4231888 | + | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| K5T46_RS20380 (4231898) | 4231898..4232350 | + | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| K5T46_RS20385 (4232596) | 4232596..4232799 | + | 204 | Protein_4020 | RtcB family protein | - |
| K5T46_RS20390 (4232798) | 4232798..4233319 | + | 522 | Protein_4021 | peptide chain release factor H | - |
| K5T46_RS20395 (4233376) | 4233376..4234833 | - | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| K5T46_RS20400 (4235094) | 4235094..4235552 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (4236148) | 4236148..4236228 | + | 81 | NuclAT_13 | - | - |
| - (4236148) | 4236148..4236228 | + | 81 | NuclAT_13 | - | - |
| - (4236148) | 4236148..4236228 | + | 81 | NuclAT_13 | - | - |
| - (4236148) | 4236148..4236228 | + | 81 | NuclAT_13 | - | - |
| K5T46_RS20405 (4235644) | 4235644..4236888 | + | 1245 | WP_000189541.1 | esterase FrsA | - |
| K5T46_RS20410 (4236946) | 4236946..4237347 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| K5T46_RS20415 (4237560) | 4237560..4237712 | + | 153 | WP_001135732.1 | type I toxin-antitoxin system toxin HokA | - |
| K5T46_RS20420 (4237689) | 4237689..4237760 | - | 72 | WP_211180513.1 | protein YsaE | - |
| K5T46_RS20425 (4237899) | 4237899..4238111 | - | 213 | WP_000014594.1 | RNA chaperone/antiterminator CspA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|