MGE detailed information
MGE type: Genomic_island MGE length: 28226 bp
Accession: NZ_CP081457 Location: 1148325..1176550 Organism: Pseudomonas syringae pv. actinidifoliorum ICMP 18803 Replicon: chromosome
Accession: NZ_CP081457 Location: 1148325..1176550 Organism: Pseudomonas syringae pv. actinidifoliorum ICMP 18803 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A237_RS05215 (A237_005200) | 1144041..1145189 | - | 1149 | WP_017700229.1 | glycosyltransferase family 1 protein | - |
| A237_RS05220 (A237_005205) | 1145468..1146886 | + | 1419 | WP_017700230.1 | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | - |
| A237_RS05225 (A237_005210) | 1146952..1147626 | - | 675 | WP_017700231.1 | CGNR zinc finger domain-containing protein | - |
| A237_RS05230 (A237_005215) | 1147721..1148317 | - | 597 | WP_017700232.1 | adenylyl-sulfate kinase | - |
| A237_RS05235 (A237_005220) | 1148325..1149557 | - | 1233 | WP_017700233.1 | MFS transporter | - |
| A237_RS05240 (A237_005225) | 1149554..1150321 | - | 768 | WP_017700234.1 | hypothetical protein | VF |
| A237_RS05245 (A237_005230) | 1150331..1151467 | - | 1137 | WP_017700235.1 | hypothetical protein | - |
| A237_RS05250 (A237_005235) | 1151464..1152189 | - | 726 | WP_017700236.1 | SDR family oxidoreductase | - |
| A237_RS05255 (A237_005240) | 1152203..1152931 | - | 729 | WP_017700237.1 | sulfotransferase family protein | - |
| A237_RS05260 (A237_005245) | 1152928..1153734 | - | 807 | WP_017700238.1 | transaldolase family protein | - |
| A237_RS05265 (A237_005250) | 1153794..1154180 | - | 387 | Protein_1026 | IS66 family transposase ISPsy34 | Transposase |
| A237_RS05270 (A237_005255) | 1154294..1154587 | - | 294 | Protein_1027 | hypothetical protein | - |
| A237_RS05275 (A237_005260) | 1154681..1155073 | + | 393 | WP_005783163.1 | CesT family type III secretion system chaperone | - |
| A237_RS05280 (A237_005265) | 1155144..1155758 | + | 615 | WP_032607045.1 | AvrPphF family type III effector | - |
| A237_RS05285 (A237_005270) | 1155882..1155986 | + | 105 | Protein_1030 | IS110 family transposase | - |
| A237_RS05290 (A237_005275) | 1157127..1157903 | - | 777 | WP_158490979.1 | YopT-type cysteine protease domain-containing protein | - |
| A237_RS05295 (A237_005280) | 1158227..1159150 | - | 924 | Protein_1032 | DEAD/DEAH box helicase | - |
| A237_RS05300 | 1159286..1159421 | - | 136 | Protein_1033 | prevent-host-death protein | - |
| A237_RS05305 (A237_005285) | 1159507..1159995 | + | 489 | Protein_1034 | type III effector | - |
| A237_RS05310 (A237_005290) | 1160162..1160512 | - | 351 | WP_017700245.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A237_RS05315 (A237_005295) | 1160528..1160776 | - | 249 | WP_017685122.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| A237_RS05320 (A237_005300) | 1161118..1162080 | + | 963 | WP_017700247.1 | IS91 family transposase ISTha3 | Transposase |
| A237_RS05325 (A237_005305) | 1162244..1162495 | - | 252 | WP_017700248.1 | hypothetical protein | - |
| A237_RS05330 | 1162756..1162969 | + | 214 | Protein_1039 | hypothetical protein | - |
| A237_RS05335 (A237_005315) | 1164296..1164790 | + | 495 | WP_017700250.1 | hypothetical protein | - |
| A237_RS05340 | 1164756..1164927 | + | 172 | Protein_1041 | IS5/IS1182 family transposase | - |
| A237_RS05345 (A237_005320) | 1165132..1165842 | - | 711 | WP_229614201.1 | XopAF/AvrXv3 family type III secretion system effector | - |
| A237_RS05350 (A237_005325) | 1166155..1166976 | - | 822 | WP_017700252.1 | C58 family peptidase | - |
| A237_RS05355 (A237_005330) | 1167644..1168825 | - | 1182 | WP_017700253.1 | glycoside hydrolase family 10 protein | - |
| A237_RS05360 (A237_005335) | 1168910..1170205 | - | 1296 | WP_017700254.1 | glycoside hydrolase family 68 protein | - |
| A237_RS05365 (A237_005340) | 1170217..1170402 | - | 186 | WP_010209989.1 | Com family DNA-binding transcriptional regulator | - |
| A237_RS05370 | 1170331..1170774 | + | 444 | WP_229614202.1 | hypothetical protein | - |
| A237_RS05375 (A237_005350) | 1170821..1172770 | - | 1950 | WP_017700256.1 | hypothetical protein | VF |
| A237_RS05380 (A237_005355) | 1173276..1173350 | + | 75 | Protein_1049 | IS5/IS1182 family transposase | - |
| A237_RS05385 (A237_005360) | 1173396..1174928 | - | 1533 | WP_032607049.1 | IS66 family transposase ISPsy34 | Transposase |
| A237_RS05390 (A237_005365) | 1174946..1175305 | - | 360 | WP_017700258.1 | IS66 family transposase ISPsy34 | Transposase |
| A237_RS05395 (A237_005370) | 1175376..1175804 | - | 429 | WP_153003540.1 | hypothetical protein | - |
| A237_RS05400 | 1175830..1176111 | - | 282 | WP_254853936.1 | HAD-IA family hydrolase | - |
| A237_RS05405 | 1176125..1176550 | - | 426 | WP_017700260.1 | HAD hydrolase-like protein | - |
| A237_RS05410 (A237_005380) | 1176923..1178023 | - | 1101 | WP_003382573.1 | redox-regulated ATPase YchF | - |
| A237_RS05415 (A237_005385) | 1178045..1178629 | - | 585 | WP_017700261.1 | aminoacyl-tRNA hydrolase | - |
| A237_RS05420 (A237_005390) | 1178794..1179405 | - | 612 | WP_017700262.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| A237_RS05425 (A237_005395) | 1179543..1180484 | - | 942 | WP_002552145.1 | ribose-phosphate pyrophosphokinase | - |
| A237_RS05435 (A237_005405) | 1180643..1181491 | - | 849 | WP_005615187.1 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|