MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 55471 bp
Accession: NZ_CP081351 Location: 1144940..1200410 Organism: Klebsiella michiganensis strain CCRI-24235 Replicon: chromosome
Accession: NZ_CP081351 Location: 1144940..1200410 Organism: Klebsiella michiganensis strain CCRI-24235 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Km24235_RS05460 (Km24235_1085) | 1140614..1142170 | + | 1557 | WP_222582213.1 | type I-E CRISPR-associated protein Cse1/CasA | - |
| Km24235_RS05465 (Km24235_1086) | 1142167..1142721 | + | 555 | WP_014839377.1 | type I-E CRISPR-associated protein Cse2/CasB | - |
| Km24235_RS05470 (Km24235_1087) | 1142733..1143791 | + | 1059 | WP_014839376.1 | type I-E CRISPR-associated protein Cas7/Cse4/CasC | - |
| Km24235_RS05475 (Km24235_1088) | 1143801..1144547 | + | 747 | WP_222582214.1 | type I-E CRISPR-associated protein Cas5/CasD | - |
| Km24235_RS05480 (Km24235_1089) | 1144529..1145173 | + | 645 | WP_172868274.1 | type I-E CRISPR-associated protein Cas6/Cse3/CasE | - |
| Km24235_RS05485 (Km24235_1090) | 1145176..1146096 | + | 921 | WP_222582215.1 | type I-E CRISPR-associated endonuclease Cas1e | - |
| Km24235_RS05490 (Km24235_1091) | 1146096..1146389 | + | 294 | WP_014839372.1 | type I-E CRISPR-associated endoribonuclease Cas2e | - |
| Km24235_RS05495 (Km24235_1092) | 1148637..1149692 | - | 1056 | WP_025106436.1 | aminopeptidase | - |
| Km24235_RS05500 (Km24235_1093) | 1149940..1151346 | + | 1407 | WP_162097155.1 | siroheme synthase CysG | - |
| Km24235_RS05505 (Km24235_1094) | 1151356..1152264 | + | 909 | WP_004104981.1 | sulfate adenylyltransferase subunit CysD | - |
| Km24235_RS05510 (Km24235_1095) | 1152274..1153701 | + | 1428 | WP_196546596.1 | sulfate adenylyltransferase subunit CysN | - |
| Km24235_RS05515 (Km24235_1096) | 1153701..1154306 | + | 606 | WP_004853621.1 | Adenylyl-sulfate kinase | VF |
| Km24235_RS05520 (Km24235_1097) | 1154360..1154686 | + | 327 | WP_014839365.1 | DUF3561 family protein | - |
| Km24235_RS05525 (Km24235_1098) | 1154827..1155144 | + | 318 | WP_004104977.1 | cell division protein FtsB | - |
| Km24235_RS05530 (Km24235_1099) | 1155164..1155874 | + | 711 | WP_004853617.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| Km24235_RS05535 (Km24235_1100) | 1155874..1156353 | + | 480 | WP_004853615.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| Km24235_RS05540 (Km24235_1101) | 1156350..1157399 | + | 1050 | WP_032720485.1 | tRNA pseudouridine(13) synthase TruD | - |
| Km24235_RS05545 (Km24235_1102) | 1157380..1158141 | + | 762 | WP_004124266.1 | 5'/3'-nucleotidase SurE | - |
| Km24235_RS05550 (Km24235_1103) | 1158135..1158761 | + | 627 | WP_009651549.1 | protein-L-isoaspartate(D-aspartate) O-methyltransferase | - |
| Km24235_RS05555 (Km24235_1104) | 1158944..1160002 | + | 1059 | WP_225935999.1 | murein hydrolase activator NlpD | - |
| Km24235_RS05560 (Km24235_1105) | 1160162..1161154 | + | 993 | WP_004104962.1 | RNA polymerase sigma factor RpoS | - |
| Km24235_RS05565 (Km24235_1106) | 1161220..1161597 | - | 378 | WP_042945973.1 | hypothetical protein | - |
| Km24235_RS05570 (Km24235_1107) | 1161594..1162808 | - | 1215 | WP_014226583.1 | MFS transporter | - |
| Km24235_RS05575 (Km24235_1108) | 1162916..1163803 | + | 888 | WP_222582447.1 | HTH-type transcriptional regulator ArgP | VF |
| Km24235_RS05580 (Km24235_1109) | 1163800..1164216 | - | 417 | WP_004853601.1 | MarR family transcriptional regulator | - |
| Km24235_RS05585 (Km24235_1110) | 1164386..1164979 | + | 594 | WP_004104955.1 | non-oxidative hydroxyarylic acid decarboxylases subunit B | - |
| Km24235_RS05590 (Km24235_1111) | 1164979..1166406 | + | 1428 | WP_004853598.1 | non-oxidative hydroxyarylic acid decarboxylases subunit C | - |
| Km24235_RS05595 (Km24235_1112) | 1166417..1166653 | + | 237 | WP_004853596.1 | non-oxidative hydroxyarylic acid decarboxylases subunit D | - |
| Km24235_RS05600 (Km24235_1113) | 1166992..1167144 | + | 153 | WP_009651623.1 | Hok/Gef family protein | - |
| Km24235_RS05605 (Km24235_1114) | 1167264..1169831 | - | 2568 | WP_222582217.1 | DNA mismatch repair protein MutS | - |
| Km24235_RS05610 (Km24235_1115) | 1169979..1171430 | + | 1452 | WP_222582218.1 | tyrosine-type recombinase/integrase | - |
| Km24235_RS05615 (Km24235_1116) | 1171450..1171953 | - | 504 | WP_222582219.1 | addiction module antitoxin | Antitoxin Detail |
| Km24235_RS05620 | 1171965..1172204 | - | 240 | WP_225936001.1 | DUF4160 domain-containing protein | Toxin Detail |
| Km24235_RS05625 (Km24235_1117) | 1172437..1173048 | + | 612 | WP_222582220.1 | hypothetical protein | - |
| Km24235_RS05630 (Km24235_1118) | 1173147..1174226 | + | 1080 | WP_222582221.1 | hypothetical protein | - |
| Km24235_RS28870 (Km24235_1119) | 1174416..1174988 | - | 573 | WP_225935982.1 | hypothetical protein | - |
| Km24235_RS05640 (Km24235_1120) | 1175435..1176658 | + | 1224 | WP_222582222.1 | 3,4-dihydroxy-2-butanone 4-phosphate synthase ; Integrase | Integrase |
| Km24235_RS05645 (Km24235_1121) | 1176651..1177970 | + | 1320 | WP_222582223.1 | Putrescine transporter PotE ; Integrase | Integrase |
| Km24235_RS05650 (Km24235_1122) | 1177967..1179784 | + | 1818 | WP_222582224.1 | DNA-binding protein | - |
| Km24235_RS05655 (Km24235_1123) | 1179793..1180194 | + | 402 | WP_222582225.1 | hypothetical protein | - |
| Km24235_RS05660 (Km24235_1124) | 1180286..1180705 | + | 420 | WP_222582226.1 | hypothetical protein | - |
| Km24235_RS05665 (Km24235_1125) | 1180757..1181335 | - | 579 | WP_222582227.1 | DUF4755 domain-containing protein | - |
| Km24235_RS05670 (Km24235_1126) | 1181575..1182693 | - | 1119 | WP_225935985.1 | relaxase/mobilization nuclease domain-containing protein | - |
| Km24235_RS05675 (Km24235_1127) | 1182698..1183051 | - | 354 | WP_222582229.1 | hypothetical protein | - |
| Km24235_RS05680 (Km24235_1128) | 1183355..1183720 | + | 366 | WP_065519033.1 | hypothetical protein | - |
| Km24235_RS05685 (Km24235_1129) | 1183792..1184295 | + | 504 | WP_032673137.1 | hypothetical protein | - |
| Km24235_RS05690 (Km24235_1130) | 1184432..1185433 | + | 1002 | WP_222582230.1 | hypothetical protein | - |
| Km24235_RS05695 (Km24235_1131) | 1185611..1186273 | - | 663 | WP_032673140.1 | retron Ec48 family effector membrane protein | - |
| Km24235_RS05700 (Km24235_1132) | 1186263..1187444 | - | 1182 | WP_222582231.1 | reverse transcriptase family protein | - |
| Km24235_RS05705 (Km24235_1133) | 1188599..1189138 | + | 540 | WP_004124241.1 | hypothetical protein | VF |
| Km24235_RS05710 (Km24235_1134) | 1189218..1189772 | + | 555 | WP_014226579.1 | Pyridoxine/pyridoxamine 5'-phosphate oxidase | VF |
| Km24235_RS05715 (Km24235_1135) | 1189848..1192316 | + | 2469 | WP_014839357.1 | Type I secretion system membrane fusion protein PrsE | VF |
| Km24235_RS05720 (Km24235_1136) | 1192342..1193085 | + | 744 | WP_032720410.1 | hypothetical protein | VF |
| Km24235_RS05725 (Km24235_1137) | 1193101..1193733 | + | 633 | WP_032751025.1 | fimbrial protein | - |
| Km24235_RS05730 (Km24235_1138) | 1193733..1194785 | + | 1053 | WP_200519420.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| Km24235_RS05735 (Km24235_1139) | 1194795..1195343 | + | 549 | WP_014226575.1 | hypothetical protein | VF |
| Km24235_RS05740 (Km24235_1140) | 1195366..1196037 | + | 672 | WP_014226574.1 | transcriptional regulator | - |
| Km24235_RS05745 (Km24235_1141) | 1196142..1196348 | + | 207 | WP_014226573.1 | DUF4762 family protein | - |
| Km24235_RS05750 (Km24235_1142) | 1196419..1197087 | + | 669 | WP_032694650.1 | DsbA family protein | - |
| Km24235_RS05755 (Km24235_1143) | 1197090..1198040 | + | 951 | WP_032694649.1 | ABC transporter | - |
| Km24235_RS05760 (Km24235_1144) | 1198050..1200161 | + | 2112 | WP_222582232.1 | ATP-binding cassette domain-containing protein | - |
| Km24235_RS05765 (Km24235_1145) | 1200158..1201318 | + | 1161 | WP_222582233.1 | efflux RND transporter periplasmic adaptor subunit | - |
| Km24235_RS05770 (Km24235_1146) | 1201318..1203261 | + | 1944 | WP_085520472.1 | ABC transporter permease | - |
| Km24235_RS05775 (Km24235_1147) | 1203258..1204655 | + | 1398 | WP_032720412.1 | TolC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|