MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 135135 bp
Accession: NZ_CP081343 Location: 1..135135 Organism: Pantoea ananatis strain TZ39 Replicon: plasmid plas1
Accession: NZ_CP081343 Location: 1..135135 Organism: Pantoea ananatis strain TZ39 Replicon: plasmid plas1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K4732_RS20730 (K4732_20730) | 762..1397 | - | 636 | Protein_1 | glycoside hydrolase family 19 protein | - |
| K4732_RS20735 (K4732_20735) | 1863..2618 | + | 756 | WP_221612002.1 | cadherin-like beta sandwich domain-containing protein | - |
| K4732_RS22915 | 2716..2850 | - | 135 | WP_260412025.1 | hypothetical protein | - |
| K4732_RS22920 | 3078..3758 | + | 681 | WP_260412026.1 | putative Ig domain-containing protein | - |
| K4732_RS20750 (K4732_20750) | 3656..3913 | + | 258 | WP_221612005.1 | putative Ig domain-containing protein | - |
| K4732_RS22925 | 4381..4899 | + | 519 | Protein_6 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| K4732_RS22930 | 5016..5138 | + | 123 | Protein_7 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| K4732_RS20760 (K4732_20760) | 5324..8428 | + | 3105 | WP_221612006.1 | MAC/perforin domain-containing protein | - |
| K4732_RS20765 (K4732_20765) | 8591..10294 | + | 1704 | WP_221612007.1 | HNH endonuclease | - |
| K4732_RS22935 | 10318..10449 | - | 132 | WP_260412027.1 | hypothetical protein | - |
| K4732_RS20775 (K4732_20775) | 11866..12282 | - | 417 | WP_221612008.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K4732_RS20780 (K4732_20780) | 12279..12509 | - | 231 | WP_047596145.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| K4732_RS20785 (K4732_20785) | 13068..13427 | + | 360 | WP_047714313.1 | hypothetical protein | - |
| K4732_RS20790 (K4732_20790) | 13481..13984 | + | 504 | WP_221612009.1 | hypothetical protein | - |
| K4732_RS20795 (K4732_20795) | 14287..15063 | + | 777 | WP_221612010.1 | site-specific integrase | - |
| K4732_RS20800 (K4732_20800) | 15176..15802 | - | 627 | WP_221612011.1 | transposase family protein | - |
| K4732_RS20805 (K4732_20805) | 16171..18822 | + | 2652 | WP_221612012.1 | phosphoenolpyruvate carboxylase | - |
| K4732_RS20810 (K4732_20810) | 18828..20174 | + | 1347 | WP_221612013.1 | MFS transporter | - |
| K4732_RS20815 (K4732_20815) | 20171..21151 | + | 981 | WP_221612014.1 | 3-keto-5-aminohexanoate cleavage protein | - |
| K4732_RS20820 (K4732_20820) | 21163..22209 | + | 1047 | WP_221612015.1 | NAD(P)-dependent oxidoreductase | - |
| K4732_RS20830 (K4732_20830) | 24040..24987 | - | 948 | WP_221612016.1 | hypothetical protein | - |
| K4732_RS20835 (K4732_20835) | 24984..26567 | - | 1584 | WP_221612017.1 | AAA family ATPase | - |
| K4732_RS20840 (K4732_20840) | 26894..27718 | + | 825 | WP_260412028.1 | ParA family protein | - |
| K4732_RS20845 (K4732_20845) | 27718..28011 | + | 294 | WP_221612018.1 | hypothetical protein | - |
| K4732_RS20850 (K4732_20850) | 28104..29648 | - | 1545 | WP_221612019.1 | P-loop NTPase fold protein | - |
| K4732_RS20855 (K4732_20855) | 30401..31111 | + | 711 | WP_221612020.1 | tyrosine-type recombinase/integrase | - |
| K4732_RS20860 (K4732_20860) | 31204..31935 | + | 732 | WP_221612021.1 | DUF4145 domain-containing protein | - |
| K4732_RS20865 (K4732_20865) | 32010..32570 | + | 561 | WP_221612022.1 | hypothetical protein | - |
| K4732_RS20870 (K4732_20870) | 32622..33008 | + | 387 | WP_221612023.1 | hypothetical protein | - |
| K4732_RS20875 (K4732_20875) | 33378..34334 | + | 957 | WP_221612024.1 | plasmid segregation protein ParM | - |
| K4732_RS20880 (K4732_20880) | 34339..34704 | + | 366 | WP_221612025.1 | plasmid partitioning/stability family protein | - |
| K4732_RS20885 (K4732_20885) | 34720..34962 | + | 243 | WP_019105459.1 | hypothetical protein | - |
| K4732_RS20890 (K4732_20890) | 35041..35724 | + | 684 | WP_221612026.1 | hypothetical protein | - |
| K4732_RS20895 (K4732_20895) | 35821..36063 | + | 243 | WP_210526115.1 | hypothetical protein | - |
| K4732_RS20900 (K4732_20900) | 36056..37096 | - | 1041 | Protein_36 | translesion error-prone DNA polymerase V subunit UmuC | - |
| K4732_RS20905 (K4732_20905) | 37346..38344 | + | 999 | WP_014606787.1 | beta-propeller fold lactonase family protein | - |
| K4732_RS20910 (K4732_20910) | 38496..39656 | + | 1161 | WP_014606788.1 | TDT family transporter | - |
| K4732_RS20915 (K4732_20915) | 39653..40252 | + | 600 | WP_014606789.1 | uracil-DNA glycosylase family protein | - |
| K4732_RS20920 (K4732_20920) | 40450..41358 | + | 909 | WP_014606790.1 | DHH family phosphoesterase | - |
| K4732_RS20925 (K4732_20925) | 41355..41780 | + | 426 | WP_014606791.1 | universal stress protein | - |
| K4732_RS20930 (K4732_20930) | 41796..43085 | + | 1290 | WP_014606792.1 | phosphopyruvate hydratase | - |
| K4732_RS20935 (K4732_20935) | 43129..43836 | + | 708 | WP_019105545.1 | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | - |
| K4732_RS20940 (K4732_20940) | 43833..44213 | + | 381 | WP_014606794.1 | fluoride efflux transporter CrcB | - |
| K4732_RS20945 (K4732_20945) | 44380..44781 | - | 402 | WP_014606795.1 | VOC family protein | - |
| K4732_RS20950 (K4732_20950) | 44907..47024 | - | 2118 | WP_014606796.1 | tyrosine-type recombinase/integrase | - |
| K4732_RS20955 (K4732_20955) | 47026..48009 | - | 984 | WP_014594566.1 | tyrosine-type recombinase/integrase | - |
| K4732_RS20960 (K4732_20960) | 48140..48310 | - | 171 | Protein_48 | DNA polymerase V subunit UmuC | - |
| K4732_RS20965 (K4732_20965) | 48319..48768 | - | 450 | WP_221612027.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| K4732_RS20970 (K4732_20970) | 49477..51009 | + | 1533 | WP_221612028.1 | hypothetical protein | - |
| K4732_RS20975 (K4732_20975) | 51199..51513 | - | 315 | WP_221612029.1 | hypothetical protein | - |
| K4732_RS20980 (K4732_20980) | 51933..52262 | - | 330 | WP_110268909.1 | hypothetical protein | - |
| K4732_RS20985 (K4732_20985) | 52255..53799 | - | 1545 | WP_221612030.1 | Methyl-accepting chemotaxis protein IV | VF |
| K4732_RS20990 (K4732_20990) | 54242..57526 | + | 3285 | WP_221612031.1 | Multifunctional conjugation protein TraI | Relaxase |
| K4732_RS20995 (K4732_20995) | 57611..58420 | + | 810 | WP_221612032.1 | DsbA family protein | - |
| K4732_RS21000 (K4732_21000) | 58611..58883 | - | 273 | WP_221612033.1 | hypothetical protein | - |
| K4732_RS21005 (K4732_21005) | 60208..62124 | + | 1917 | WP_221612034.1 | Methyl-accepting chemotaxis protein II | VF |
| K4732_RS21010 (K4732_21010) | 62548..63054 | - | 507 | WP_058702796.1 | ATP-binding protein | - |
| K4732_RS21015 (K4732_21015) | 63472..64086 | + | 615 | WP_221612035.1 | histidine phosphatase family protein | - |
| K4732_RS21020 (K4732_21020) | 64543..66912 | - | 2370 | WP_260412029.1 | S8 family peptidase | - |
| K4732_RS21025 (K4732_21025) | 67031..68068 | - | 1038 | WP_221612036.1 | ATP-dependent zinc metalloprotease FtsH | VF |
| K4732_RS21030 (K4732_21030) | 68464..69360 | - | 897 | WP_221611976.1 | DMT family transporter | - |
| K4732_RS21035 (K4732_21035) | 69414..70028 | + | 615 | WP_014594575.1 | TetR/AcrR family transcriptional regulator | - |
| K4732_RS21040 (K4732_21040) | 70278..70793 | + | 516 | WP_221611977.1 | GNAT family N-acetyltransferase | - |
| K4732_RS21045 (K4732_21045) | 70914..71717 | - | 804 | WP_028722796.1 | IclR family transcriptional regulator | - |
| K4732_RS21050 (K4732_21050) | 71787..73241 | + | 1455 | WP_210456325.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| K4732_RS21055 (K4732_21055) | 73270..74430 | + | 1161 | WP_210456324.1 | Long-chain-alcohol dehydrogenase 1 | VF |
| K4732_RS21060 (K4732_21060) | 74492..75283 | + | 792 | WP_028722793.1 | N-acyl homoserine lactonase family protein | - |
| K4732_RS21065 (K4732_21065) | 75875..76510 | + | 636 | WP_014606773.1 | DUF2268 domain-containing putative Zn-dependent protease | - |
| K4732_RS21070 (K4732_21070) | 76702..77115 | + | 414 | WP_221611978.1 | hypothetical protein | - |
| K4732_RS22940 | 77306..77662 | - | 357 | WP_260412015.1 | hypothetical protein | - |
| K4732_RS22945 | 77680..77964 | - | 285 | WP_260412016.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| K4732_RS21080 (K4732_21080) | 79146..80165 | + | 1020 | WP_221611979.1 | plasmid replication initiator RepA | - |
| K4732_RS21085 (K4732_21085) | 81249..81563 | - | 315 | WP_239642650.1 | DUF3574 domain-containing protein | - |
| K4732_RS21090 (K4732_21090) | 82080..82286 | + | 207 | WP_028722283.1 | hypothetical protein | - |
| K4732_RS22950 | 82484..82609 | - | 126 | WP_260412017.1 | hypothetical protein | - |
| K4732_RS22955 | 83159..83395 | + | 237 | WP_028722282.1 | hypothetical protein | - |
| K4732_RS22960 | 83404..83583 | + | 180 | WP_028722281.1 | hypothetical protein | - |
| K4732_RS21100 (K4732_21100) | 83896..84090 | + | 195 | WP_071994847.1 | general stress protein | - |
| K4732_RS21105 (K4732_21105) | 84221..84784 | + | 564 | WP_028722280.1 | hypothetical protein | - |
| K4732_RS21110 (K4732_21110) | 84985..85311 | + | 327 | WP_071994846.1 | four-helix bundle copper-binding protein | - |
| K4732_RS21115 (K4732_21115) | 86051..89017 | + | 2967 | WP_028722278.1 | formate dehydrogenase subunit alpha | - |
| K4732_RS21120 (K4732_21120) | 89017..89499 | + | 483 | WP_221611980.1 | DUF1641 domain-containing protein | - |
| K4732_RS21125 (K4732_21125) | 89492..90853 | + | 1362 | WP_050598372.1 | cytochrome ubiquinol oxidase subunit I | - |
| K4732_RS21130 (K4732_21130) | 90850..91794 | + | 945 | WP_050598371.1 | cytochrome d ubiquinol oxidase subunit II | - |
| K4732_RS21135 (K4732_21135) | 92339..93976 | - | 1638 | WP_028722275.1 | Methyl-accepting chemotaxis protein II | VF |
| K4732_RS21140 (K4732_21140) | 94518..94919 | + | 402 | Protein_87 | Fatty acyl-CoA reductase | VF |
| K4732_RS21145 (K4732_21145) | 95500..96678 | + | 1179 | WP_221611981.1 | MFS transporter | - |
| K4732_RS21150 (K4732_21150) | 96671..97420 | + | 750 | WP_221611982.1 | ferritin-like domain-containing protein | - |
| K4732_RS21155 (K4732_21155) | 97421..98023 | + | 603 | WP_221611983.1 | hypothetical protein | - |
| K4732_RS21160 (K4732_21160) | 98016..98309 | + | 294 | WP_221611984.1 | pyrimidine/purine nucleoside phosphorylase | - |
| K4732_RS21165 (K4732_21165) | 98302..99318 | + | 1017 | WP_260412018.1 | Gfo/Idh/MocA family oxidoreductase | - |
| K4732_RS21170 (K4732_21170) | 99340..100350 | + | 1011 | WP_221611986.1 | sterol desaturase family protein | - |
| K4732_RS22965 | 100679..100858 | - | 180 | WP_260412020.1 | DUF1493 family protein | - |
| K4732_RS21180 (K4732_21180) | 101284..101559 | + | 276 | WP_024472397.1 | hypothetical protein | - |
| K4732_RS21185 (K4732_21185) | 101620..102513 | - | 894 | WP_088900466.1 | dihydrodipicolinate synthase family protein | - |
| K4732_RS21190 (K4732_21190) | 102894..103361 | - | 468 | WP_014333122.1 | GNAT family N-acetyltransferase | - |
| K4732_RS21195 (K4732_21195) | 104004..104405 | + | 402 | WP_029990737.1 | VOC family protein | - |
| K4732_RS21200 (K4732_21200) | 104518..104934 | - | 417 | WP_028722765.1 | GNAT family N-acetyltransferase | - |
| K4732_RS21205 (K4732_21205) | 105166..106255 | - | 1090 | Protein_100 | IS3 family transposase | - |
| K4732_RS21215 (K4732_21215) | 107856..108464 | + | 609 | WP_221611988.1 | Tyrosine recombinase XerD | VF |
| K4732_RS21220 (K4732_21220) | 108881..109438 | + | 558 | WP_221611989.1 | Type-1 fimbrial protein, A chain | VF |
| K4732_RS21225 (K4732_21225) | 109504..110052 | + | 549 | WP_260412021.1 | Type-1 fimbrial protein, A chain | VF |
| K4732_RS21230 (K4732_21230) | 110182..110829 | + | 648 | WP_221612039.1 | putative fimbrial chaperone SfmC | VF |
| K4732_RS21235 (K4732_21235) | 110928..113564 | + | 2637 | WP_221611991.1 | Outer membrane usher protein FimD | VF |
| K4732_RS21240 (K4732_21240) | 113599..114606 | + | 1008 | WP_221611992.1 | putative fimbrial-like protein SfmH | VF |
| K4732_RS21245 (K4732_21245) | 114688..114894 | + | 207 | WP_221611993.1 | FimD/PapC C-terminal domain-containing protein | - |
| K4732_RS21250 (K4732_21250) | 114863..115975 | + | 1113 | WP_221611994.1 | putative fimbrial-like protein SfmH | VF |
| K4732_RS21255 (K4732_21255) | 115993..116562 | + | 570 | WP_260412022.1 | putative fimbrial-like protein SfmF | VF |
| K4732_RS21260 (K4732_21260) | 116695..117474 | + | 780 | WP_221611995.1 | outer membrane beta-barrel protein | - |
| K4732_RS21265 (K4732_21265) | 118327..119847 | + | 1521 | WP_221611996.1 | putative signaling protein | VF |
| K4732_RS22970 | 119929..120051 | + | 123 | WP_260412023.1 | hypothetical protein | - |
| K4732_RS21270 (K4732_21270) | 120162..120755 | - | 594 | WP_221611997.1 | Tyrosine recombinase XerD | VF |
| K4732_RS22975 | 121387..121554 | - | 168 | Protein_115 | IS3 family transposase | - |
| K4732_RS22980 | 121560..121895 | - | 336 | Protein_116 | IS3 family transposase | - |
| K4732_RS22985 | 121888..122219 | - | 332 | Protein_117 | IS3 family transposase | - |
| K4732_RS21280 (K4732_21280) | 122548..122742 | - | 195 | WP_221611998.1 | hypothetical protein | - |
| K4732_RS21285 (K4732_21285) | 122808..123161 | - | 354 | Protein_119 | 4-amino-4-deoxy-L-arabinose lipid A transferase | - |
| K4732_RS21290 (K4732_21290) | 123326..123625 | - | 300 | Protein_120 | ParB N-terminal domain-containing protein | - |
| K4732_RS21295 (K4732_21295) | 124236..124502 | - | 267 | Protein_121 | IS3 family transposase IS1351 | Transposase |
| K4732_RS21300 (K4732_21300) | 124907..125761 | + | 855 | WP_221612041.1 | tyrosine-type recombinase/integrase | - |
| K4732_RS21305 (K4732_21305) | 128012..129001 | - | 990 | WP_221611999.1 | ParB family protein | - |
| K4732_RS21310 (K4732_21310) | 128998..130206 | - | 1209 | WP_047713539.1 | Plasmid partition protein A | VF |
| K4732_RS21315 (K4732_21315) | 131460..132326 | - | 867 | WP_019105437.1 | RepB family plasmid replication initiator protein | - |
| K4732_RS21320 (K4732_21320) | 132711..132914 | - | 204 | WP_221612000.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| K4732_RS21325 (K4732_21325) | 133093..133314 | + | 222 | WP_221612001.1 | KTSC domain-containing protein | - |
| K4732_RS21330 (K4732_21330) | 133802..134321 | + | 520 | Protein_128 | phospholipase D family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|