MGE detailed information
MGE type: Prophage MGE length: 59023 bp
Accession: NZ_CP081306 Location: 2015231..2074253 Organism: Escherichia coli strain Ec1079 Replicon: chromosome
Accession: NZ_CP081306 Location: 2015231..2074253 Organism: Escherichia coli strain Ec1079 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5A55_RS09755 () | 2011649..2012620 | - | 972 | WP_000564745.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| K5A55_RS09760 () | 2012617..2013360 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| K5A55_RS09765 () | 2013401..2013796 | - | 396 | WP_001356287.1 | MAPEG family protein | - |
| K5A55_RS09770 () | 2013849..2014196 | - | 348 | Protein_1908 | DUF72 domain-containing protein | - |
| K5A55_RS09775 () | 2015231..2015755 | - | 525 | WP_000258747.1 | AP2/ERF family transcription factor | - |
| K5A55_RS09780 () | 2017332..2017889 | + | 558 | WP_023147813.1 | hypothetical protein | - |
| K5A55_RS09785 () | 2017890..2018168 | + | 279 | WP_001753400.1 | hypothetical protein | - |
| K5A55_RS09790 () | 2018168..2018383 | + | 216 | WP_001681135.1 | hypothetical protein | - |
| K5A55_RS09795 () | 2018380..2018667 | + | 288 | WP_000805963.1 | HNH endonuclease | - |
| K5A55_RS09800 () | 2018823..2019146 | + | 324 | WP_001678977.1 | hypothetical protein | - |
| K5A55_RS09805 () | 2019685..2020395 | + | 711 | WP_001681134.1 | hypothetical protein | - |
| K5A55_RS09810 () | 2020404..2020712 | + | 309 | WP_001678975.1 | hypothetical protein | - |
| K5A55_RS09815 () | 2020738..2020941 | + | 204 | WP_001678974.1 | hypothetical protein | - |
| K5A55_RS09820 () | 2021100..2022920 | + | 1821 | WP_224289224.1 | tape measure protein | - |
| K5A55_RS09830 () | 2024164..2024484 | + | 321 | Protein_1920 | phage tail tape measure protein | - |
| K5A55_RS09835 () | 2024642..2025415 | + | 774 | WP_001678972.1 | hypothetical protein | - |
| K5A55_RS09840 () | 2026073..2027614 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| K5A55_RS09845 () | 2027629..2028375 | + | 747 | WP_053906593.1 | IS21 family transposase ISEc12 | Transposase |
| K5A55_RS09850 () | 2028460..2029539 | - | 1080 | Protein_1924 | hypothetical protein ; Integrase | Integrase |
| K5A55_RS09855 () | 2029610..2030086 | - | 477 | Protein_1925 | DUF72 domain-containing protein | - |
| K5A55_RS09860 () | 2030083..2030649 | - | 567 | WP_000891618.1 | hydrolase | - |
| K5A55_RS09865 () | 2030959..2032731 | + | 1773 | WP_001258662.1 | aspartate--tRNA ligase | - |
| K5A55_RS09870 () | 2032849..2033301 | + | 453 | WP_001443602.1 | dihydroneopterin triphosphate diphosphatase | - |
| K5A55_RS09875 () | 2033330..2034070 | + | 741 | WP_000907248.1 | hypothetical protein | VF |
| K5A55_RS09880 () | 2034105..2034626 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| K5A55_RS09885 () | 2034628..2035230 | - | 603 | WP_001024930.1 | YebB family permuted papain-like enzyme | - |
| K5A55_RS09890 () | 2035301..2035366 | + | 66 | WP_001386853.1 | stress response small protein YobI | - |
| K5A55_RS09895 () | 2035505..2036116 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| K5A55_RS09900 () | 2036125..2037135 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| K5A55_RS09905 () | 2037282..2038067 | - | 786 | WP_000571479.1 | hypothetical protein | VF |
| K5A55_RS09910 () | 2038064..2038819 | - | 756 | WP_000202996.1 | hypothetical protein | VF |
| K5A55_RS09915 () | 2038898..2039830 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| K5A55_RS09920 () | 2039846..2041168 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| K5A55_RS09925 () | 2041288..2042259 | + | 972 | WP_000448381.1 | hypothetical protein | VF |
| K5A55_RS09930 () | 2042390..2043832 | - | 1443 | WP_000091176.1 | pyruvate kinase | - |
| K5A55_RS09935 () | 2043960..2044829 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| K5A55_RS09940 () | 2045167..2046642 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| K5A55_RS09945 () | 2046877..2048688 | + | 1812 | WP_060621242.1 | phosphogluconate dehydratase | - |
| K5A55_RS09950 () | 2048725..2049366 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| K5A55_RS09955 () | 2049422..2050600 | - | 1179 | WP_000173475.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| K5A55_RS09960 () | 2050734..2051024 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| K5A55_RS09965 () | 2051091..2051447 | + | 357 | WP_001295500.1 | protein YebF | - |
| K5A55_RS09970 () | 2051774..2052433 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| K5A55_RS09975 () | 2052642..2054702 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| K5A55_RS09980 () | 2054699..2055361 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| K5A55_RS09985 () | 2055385..2056041 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| K5A55_RS09990 () | 2056143..2056373 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| K5A55_RS09995 () | 2056512..2056886 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| K5A55_RS10000 () | 2056890..2057762 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| K5A55_RS10005 () | 2057775..2058116 | + | 342 | WP_000976492.1 | YebY family protein | - |
| - | 2058144..2058415 | - | 272 | - | - | Antitoxin Detail |
| - | 2058274..2058377 | + | 104 | - | - | Toxin Detail |
| K5A55_RS10010 () | 2058512..2059168 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| K5A55_RS10015 () | 2059169..2059360 | - | 192 | WP_001296140.1 | YebW family protein | - |
| K5A55_RS10020 () | 2059465..2059701 | - | 237 | WP_001295499.1 | YebV family protein | - |
| K5A55_RS10025 () | 2059819..2061258 | - | 1440 | WP_000057023.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| K5A55_RS10030 () | 2061338..2063971 | - | 2634 | WP_001356288.1 | hypothetical protein | VF |
| K5A55_RS10035 () | 2063940..2065223 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| K5A55_RS10040 () | 2065353..2065850 | + | 498 | WP_001373833.1 | L-methionine (R)-S-oxide reductase | - |
| K5A55_RS10045 () | 2065947..2066645 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| K5A55_RS10050 () | 2066665..2068713 | + | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| K5A55_RS10055 () | 2068905..2069786 | + | 882 | WP_000984517.1 | protease HtpX | - |
| K5A55_RS10060 () | 2069832..2071205 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| K5A55_RS10065 () | 2071382..2072173 | + | 792 | WP_001262192.1 | DNA-binding transcriptional regulator KdgR | - |
| K5A55_RS10070 () | 2072316..2072555 | - | 240 | WP_001211011.1 | YobH family protein | - |
| K5A55_RS10075 () | 2072714..2072857 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| K5A55_RS10080 () | 2072932..2073219 | + | 288 | WP_001006866.1 | YebO family protein | - |
| K5A55_RS10085 () | 2073888..2074031 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| K5A55_RS10090 () | 2074044..2074253 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| K5A55_RS10095 () | 2074419..2075228 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| K5A55_RS10100 () | 2075225..2075791 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| K5A55_RS10105 () | 2076220..2076678 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| K5A55_RS10110 () | 2076733..2077584 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| K5A55_RS10115 () | 2077597..2078397 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|