MGE detailed information
MGE type: Genomic_island MGE length: 26720 bp
Accession: NZ_CP081192 Location: 4254252..4280971 Organism: Escherichia coli strain EC1722-1 Replicon: chromosome
Accession: NZ_CP081192 Location: 4254252..4280971 Organism: Escherichia coli strain EC1722-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K4F91_RS20550 (4249731) | 4249731..4250234 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| K4F91_RS20555 (4250247) | 4250247..4250777 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| K4F91_RS20560 (4250787) | 4250787..4253423 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| K4F91_RS20565 (4253490) | 4253490..4254215 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| K4F91_RS20570 (4254252) | 4254252..4254791 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| K4F91_RS20575 (4254856) | 4254856..4255404 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| K4F91_RS20580 (4255887) | 4255887..4256483 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| K4F91_RS20585 (4256961) | 4256961..4257563 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| K4F91_RS20590 (4259019) | 4259019..4259735 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| K4F91_RS20595 (4259755) | 4259755..4260861 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| K4F91_RS20600 (4260926) | 4260926..4261906 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| K4F91_RS26800 (4262016) | 4262016..4262221 | + | 206 | Protein_4032 | HNH endonuclease | - |
| K4F91_RS20605 (4262489) | 4262489..4263729 | - | 1241 | Protein_4033 | helicase YjhR | - |
| K4F91_RS26805 (4263845) | 4263845..4263976 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| K4F91_RS20615 (4264467) | 4264467..4264724 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| K4F91_RS20620 (4264736) | 4264736..4265281 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| K4F91_RS20625 (4265337) | 4265337..4266083 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| K4F91_RS20630 (4266252) | 4266252..4266470 | + | 219 | Protein_4038 | hypothetical protein | - |
| K4F91_RS20635 (4266508) | 4266508..4266624 | + | 117 | Protein_4039 | VOC family protein | - |
| K4F91_RS20640 (4266869) | 4266869..4267990 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| K4F91_RS20645 (4267987) | 4267987..4268265 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| K4F91_RS20650 (4268277) | 4268277..4269590 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| K4F91_RS20655 (4269603) | 4269603..4270409 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| K4F91_RS20660 (4270540) | 4270540..4270971 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| K4F91_RS20665 (4270983) | 4270983..4271615 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| K4F91_RS20670 (4271632) | 4271632..4272414 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| K4F91_RS20675 (4272717) | 4272717..4273505 | + | 789 | WP_096959292.1 | IclR family transcriptional regulator | - |
| K4F91_RS20680 (4273510) | 4273510..4274415 | + | 906 | WP_001335841.1 | dihydrodipicolinate synthase family protein | - |
| K4F91_RS20685 (4274426) | 4274426..4276393 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| K4F91_RS20690 (4276500) | 4276500..4277849 | + | 1350 | WP_001128363.1 | GntP family permease | - |
| K4F91_RS20695 (4278196) | 4278196..4279182 | + | 987 | WP_000373366.1 | sugar-binding transcriptional regulator | - |
| K4F91_RS20700 (4279223) | 4279223..4280080 | - | 858 | WP_106423882.1 | GRP family sugar transporter | - |
| K4F91_RS20705 (4280330) | 4280330..4280971 | - | 642 | WP_000439687.1 | L-fuculose-phosphate aldolase | - |
| K4F91_RS20710 (4281002) | 4281002..4282117 | - | 1116 | WP_001022014.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| K4F91_RS20715 (4282127) | 4282127..4283386 | - | 1260 | WP_000132327.1 | S-methyl-5-thioribose kinase | - |
| K4F91_RS20720 (4284126) | 4284126..4284224 | - | 99 | Protein_4056 | toxin | - |
| K4F91_RS20725 (4284314) | 4284314..4284682 | - | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| K4F91_RS20730 (4284845) | 4284845..4285066 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| K4F91_RS20735 (4285129) | 4285129..4285605 | - | 477 | WP_001186775.1 | RadC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|