MGE detailed information
MGE type: Prophage MGE length: 8590 bp
Accession: NZ_CP081017 Location: 2836645..2845234 Organism: Clostridioides difficile strain SH Replicon: chromosome
Accession: NZ_CP081017 Location: 2836645..2845234 Organism: Clostridioides difficile strain SH Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K2217_RS13210 (K2217_13220) | 2831841..2833058 | - | 1218 | WP_003431029.1 | threonine ammonia-lyase | - |
| K2217_RS13215 (K2217_13225) | 2833716..2835344 | + | 1629 | WP_003431030.1 | aspartate 4-decarboxylase | - |
| K2217_RS13220 (K2217_13230) | 2835465..2836460 | + | 996 | WP_003431031.1 | asparaginase | - |
| K2217_RS13225 (K2217_13235) | 2836645..2837028 | - | 384 | WP_003431032.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| K2217_RS13230 (K2217_13240) | 2837408..2837584 | + | 177 | WP_003431033.1 | hypothetical protein | - |
| K2217_RS13235 (K2217_13245) | 2837810..2838010 | + | 201 | WP_003431034.1 | cold-shock protein | - |
| K2217_RS13240 (K2217_13250) | 2838456..2839778 | + | 1323 | WP_021427477.1 | ATP-binding protein | - |
| K2217_RS13245 (K2217_13255) | 2839821..2840402 | + | 582 | WP_003431036.1 | accessory gene regulator B family protein | - |
| K2217_RS13250 (K2217_13260) | 2840420..2840581 | + | 162 | WP_003431037.1 | cyclic lactone autoinducer peptide | - |
| K2217_RS13255 (K2217_13265) | 2840603..2841400 | - | 798 | WP_003431038.1 | N-acetylmuramoyl-L-alanine amidase | - |
| K2217_RS13260 (K2217_13270) | 2841397..2841657 | - | 261 | WP_003431039.1 | phage holin family protein | - |
| - | 2842476..2842610 | + | 135 | - | - | Antitoxin Detail |
| K2217_RS13265 (K2217_13275) | 2842527..2842685 | - | 159 | WP_003431040.1 | hypothetical protein | Toxin Detail |
| K2217_RS13270 (K2217_13280) | 2843043..2844413 | - | 1371 | WP_003431041.1 | cell wall-binding protein Cwp29 | - |
| K2217_RS13275 (K2217_13290) | 2844848..2845234 | + | 387 | WP_231299769.1 | hypothetical protein | - |
| K2217_RS13280 (K2217_13295) | 2845612..2845737 | + | 126 | WP_003431043.1 | hypothetical protein | - |
| K2217_RS13285 (K2217_13300) | 2846100..2846180 | - | 81 | Protein_2542 | VOC family protein | - |
| K2217_RS13290 (K2217_13305) | 2846220..2846888 | - | 669 | WP_003431044.1 | VanZ family protein | - |
| K2217_RS13295 (K2217_13310) | 2846987..2847370 | - | 384 | WP_071599195.1 | helix-turn-helix transcriptional regulator | - |
| K2217_RS13300 (K2217_13315) | 2847770..2850190 | - | 2421 | WP_003431046.1 | leucine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|