MGE detailed information
MGE type: Prophage MGE length: 70138 bp
Accession: NZ_CP081017 Location: 1756558..1826695 Organism: Clostridioides difficile strain SH Replicon: chromosome
Accession: NZ_CP081017 Location: 1756558..1826695 Organism: Clostridioides difficile strain SH Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K2217_RS08195 (K2217_08210) | 1751630..1752391 | + | 762 | WP_003429799.1 | SprT family zinc-dependent metalloprotease | - |
| K2217_RS08200 (K2217_08215) | 1752921..1753160 | + | 240 | WP_003429800.1 | ACT domain-containing protein | - |
| K2217_RS08205 (K2217_08220) | 1753413..1754459 | + | 1047 | WP_256008780.1 | ketol-acid reductoisomerase | - |
| K2217_RS08210 (K2217_08225) | 1754512..1756200 | + | 1689 | WP_003429802.1 | biosynthetic-type acetolactate synthase large subunit | - |
| K2217_RS08215 (K2217_08230) | 1756558..1757688 | - | 1131 | WP_003433492.1 | site-specific integrase | - |
| K2217_RS08220 (K2217_08235) | 1757928..1758434 | - | 507 | WP_003429804.1 | ImmA/IrrE family metallo-endopeptidase | - |
| K2217_RS08225 (K2217_08240) | 1758697..1760286 | - | 1590 | WP_003429805.1 | SIR2 family protein | - |
| K2217_RS08230 (K2217_08245) | 1760310..1760855 | - | 546 | WP_003433494.1 | helix-turn-helix transcriptional regulator | - |
| K2217_RS08235 (K2217_08250) | 1761051..1761251 | + | 201 | WP_232867531.1 | helix-turn-helix domain-containing protein | - |
| K2217_RS08240 (K2217_08255) | 1761282..1762055 | + | 774 | WP_003433498.1 | Rha family transcriptional regulator | - |
| K2217_RS08245 (K2217_08260) | 1762175..1763005 | + | 831 | WP_021387707.1 | phage antirepressor KilAC domain-containing protein | - |
| K2217_RS08250 (K2217_08265) | 1763052..1763261 | + | 210 | WP_009888812.1 | hypothetical protein | - |
| K2217_RS08255 (K2217_08270) | 1763271..1763645 | - | 375 | WP_003433505.1 | DUF6173 family protein | - |
| K2217_RS08260 (K2217_08275) | 1763721..1763918 | + | 198 | WP_003433507.1 | helix-turn-helix transcriptional regulator | - |
| K2217_RS08265 (K2217_08280) | 1763949..1764341 | + | 393 | WP_003433509.1 | helix-turn-helix domain-containing protein | - |
| K2217_RS08270 (K2217_08285) | 1764322..1764471 | + | 150 | WP_003433511.1 | hypothetical protein | - |
| K2217_RS08275 (K2217_08290) | 1764542..1764979 | + | 438 | WP_003433513.1 | hypothetical protein | - |
| K2217_RS08280 (K2217_08295) | 1764991..1766157 | + | 1167 | WP_003433514.1 | DUF2800 domain-containing protein | - |
| K2217_RS08285 (K2217_08300) | 1766172..1766507 | + | 336 | WP_003433515.1 | hypothetical protein | - |
| K2217_RS08290 (K2217_08305) | 1766560..1767132 | + | 573 | WP_003429822.1 | sigma factor | - |
| K2217_RS08295 (K2217_08310) | 1767155..1767727 | + | 573 | WP_003433516.1 | DUF2815 family protein | - |
| K2217_RS08300 (K2217_08315) | 1767727..1769685 | + | 1959 | WP_003433517.1 | DNA polymerase | - |
| K2217_RS08305 (K2217_08320) | 1769697..1772114 | + | 2418 | WP_003433519.1 | virulence-associated E family protein | - |
| K2217_RS08310 (K2217_08325) | 1772396..1772722 | + | 327 | WP_003433522.1 | VRR-NUC domain-containing protein | - |
| K2217_RS08315 (K2217_08330) | 1772671..1774041 | + | 1371 | WP_003433524.1 | DEAD/DEAH box helicase | - |
| K2217_RS08320 (K2217_08335) | 1774065..1774202 | + | 138 | WP_003429830.1 | hypothetical protein | - |
| K2217_RS08325 (K2217_08340) | 1774195..1774674 | + | 480 | WP_003433526.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| K2217_RS08330 (K2217_08345) | 1775159..1775395 | + | 237 | WP_003429832.1 | BRO family protein | - |
| K2217_RS08335 (K2217_08350) | 1775698..1776672 | + | 975 | WP_003429833.1 | hypothetical protein | - |
| K2217_RS08340 (K2217_08355) | 1776693..1777202 | + | 510 | WP_003429834.1 | hypothetical protein | - |
| K2217_RS08345 (K2217_08360) | 1777273..1777965 | + | 693 | WP_003433528.1 | phage terminase small subunit | - |
| K2217_RS08350 (K2217_08365) | 1777943..1779196 | + | 1254 | WP_003433530.1 | PBSX family phage terminase large subunit | - |
| K2217_RS08355 (K2217_08370) | 1779202..1780641 | + | 1440 | WP_003429837.1 | phage portal protein | - |
| K2217_RS08360 (K2217_08375) | 1780631..1782124 | + | 1494 | WP_003429838.1 | minor capsid protein | - |
| K2217_RS08365 (K2217_08380) | 1782102..1782332 | + | 231 | WP_003429839.1 | hypothetical protein | - |
| K2217_RS08370 (K2217_08385) | 1782642..1783205 | + | 564 | WP_003433534.1 | phage scaffolding protein | - |
| K2217_RS08375 (K2217_08390) | 1783217..1784116 | + | 900 | WP_003429841.1 | phage capsid protein | - |
| K2217_RS08380 (K2217_08395) | 1784116..1784349 | + | 234 | WP_003433536.1 | hypothetical protein | - |
| K2217_RS08385 (K2217_08400) | 1784359..1784760 | + | 402 | WP_009888836.1 | hypothetical protein | - |
| K2217_RS08390 (K2217_08405) | 1784754..1785101 | + | 348 | WP_003433540.1 | hypothetical protein | - |
| K2217_RS08395 (K2217_08410) | 1785101..1785526 | + | 426 | WP_003433542.1 | HK97 gp10 family phage protein | - |
| K2217_RS08400 (K2217_08415) | 1785519..1785956 | + | 438 | WP_003433544.1 | hypothetical protein | - |
| K2217_RS08405 (K2217_08420) | 1785949..1786125 | + | 177 | WP_003433548.1 | hypothetical protein | - |
| K2217_RS08410 (K2217_08425) | 1786126..1787436 | + | 1311 | WP_003433550.1 | phage tail sheath family protein | - |
| K2217_RS08415 (K2217_08430) | 1787453..1787923 | + | 471 | WP_003429851.1 | phage tail tube protein | - |
| K2217_RS08420 (K2217_08435) | 1787995..1788435 | + | 441 | WP_003429853.1 | phage portal protein | - |
| K2217_RS08425 (K2217_08440) | 1788776..1788937 | + | 162 | WP_003429855.1 | hypothetical protein | Toxin Detail |
| - | 1788857..1788990 | - | 134 | - | - | Antitoxin Detail |
| K2217_RS08430 (K2217_08445) | 1790085..1790837 | + | 753 | WP_021387708.1 | SHOCT domain-containing protein | - |
| K2217_RS08435 (K2217_08450) | 1791141..1791314 | + | 174 | WP_003433557.1 | hypothetical protein | - |
| K2217_RS08440 (K2217_08455) | 1791438..1792265 | + | 828 | WP_003433559.1 | hypothetical protein | - |
| K2217_RS08445 (K2217_08460) | 1792314..1792490 | + | 177 | WP_003433561.1 | hypothetical protein | - |
| K2217_RS08450 (K2217_08465) | 1792921..1793481 | + | 561 | WP_021387709.1 | ribosomal protein L7/L12 | - |
| K2217_RS08455 (K2217_08470) | 1793557..1795923 | + | 2367 | WP_003433567.1 | tape measure protein | - |
| K2217_RS08460 (K2217_08475) | 1795939..1796640 | + | 702 | WP_003433569.1 | LysM peptidoglycan-binding domain-containing protein | - |
| K2217_RS08465 (K2217_08480) | 1796633..1798597 | + | 1965 | WP_003433571.1 | NlpC/P60 family protein | - |
| K2217_RS08470 (K2217_08485) | 1798611..1798871 | + | 261 | WP_003433573.1 | DUF2577 domain-containing protein | - |
| K2217_RS08475 (K2217_08490) | 1798876..1799295 | + | 420 | WP_003433575.1 | DUF2634 domain-containing protein | - |
| K2217_RS08480 (K2217_08495) | 1799296..1800342 | + | 1047 | WP_032512186.1 | baseplate J/gp47 family protein | - |
| K2217_RS08485 (K2217_08500) | 1800335..1800952 | + | 618 | WP_003433579.1 | YmfQ family protein | - |
| K2217_RS08490 (K2217_08505) | 1800964..1801956 | + | 993 | WP_021363498.1 | phage tail protein | - |
| K2217_RS08495 (K2217_08510) | 1801973..1803685 | + | 1713 | WP_003429874.1 | glycine rich domain-containing protein | - |
| K2217_RS08500 (K2217_08515) | 1803706..1804053 | + | 348 | WP_003429875.1 | hypothetical protein | - |
| K2217_RS08505 (K2217_08520) | 1804065..1804235 | + | 171 | WP_003429877.1 | hypothetical protein | - |
| K2217_RS08510 (K2217_08525) | 1804266..1804832 | + | 567 | WP_021363499.1 | hypothetical protein | - |
| K2217_RS08515 (K2217_08530) | 1804863..1805153 | + | 291 | WP_021363500.1 | hypothetical protein | - |
| K2217_RS08520 (K2217_08535) | 1805157..1805414 | + | 258 | WP_021363501.1 | phage holin family protein | - |
| K2217_RS08525 (K2217_08540) | 1805743..1806537 | + | 795 | Protein_1592 | Abi family protein | - |
| K2217_RS08530 (K2217_08545) | 1806616..1807428 | + | 813 | WP_021387710.1 | N-acetylmuramoyl-L-alanine amidase | - |
| K2217_RS08535 | 1808983..1809876 | + | 894 | Protein_1594 | cell wall-binding repeat-containing protein | - |
| K2217_RS08540 (K2217_08555) | 1809918..1810103 | - | 186 | WP_003433687.1 | hypothetical protein | - |
| K2217_RS08545 | 1810332..1810460 | - | 129 | WP_003433683.1 | hypothetical protein | - |
| K2217_RS08550 (K2217_08560) | 1810621..1810797 | - | 177 | WP_016728851.1 | hypothetical protein | - |
| K2217_RS08555 | 1811043..1811171 | - | 129 | WP_003433669.1 | hypothetical protein | - |
| K2217_RS08560 (K2217_08565) | 1811514..1812191 | + | 678 | WP_003429969.1 | manganese catalase family protein | - |
| K2217_RS08565 (K2217_08570) | 1812365..1814401 | + | 2037 | WP_003429971.1 | thioredoxin domain-containing protein | - |
| K2217_RS08570 (K2217_08575) | 1814594..1815160 | - | 567 | WP_003429973.1 | MarR family transcriptional regulator | - |
| K2217_RS08575 (K2217_08580) | 1815447..1816385 | + | 939 | WP_003429975.1 | alpha/beta hydrolase | - |
| K2217_RS08580 (K2217_08585) | 1816766..1817500 | + | 735 | WP_021387870.1 | ABC transporter ATP-binding protein | - |
| K2217_RS08585 (K2217_08590) | 1817523..1819652 | + | 2130 | WP_003433668.1 | ABC transporter permease | - |
| K2217_RS08590 (K2217_08595) | 1819869..1821083 | + | 1215 | WP_003429978.1 | helix-turn-helix transcriptional regulator | - |
| K2217_RS08595 (K2217_08600) | 1821505..1822026 | - | 522 | WP_021387871.1 | GNAT family N-acetyltransferase | - |
| K2217_RS08600 (K2217_08605) | 1822382..1823179 | + | 798 | WP_003429980.1 | 3D domain-containing protein | - |
| K2217_RS08605 (K2217_08610) | 1823289..1823879 | + | 591 | WP_003429982.1 | SGNH/GDSL hydrolase family protein | - |
| K2217_RS08610 (K2217_08615) | 1823945..1825642 | + | 1698 | WP_021393310.1 | phospho-sugar mutase | - |
| K2217_RS08615 (K2217_08620) | 1825856..1826695 | + | 840 | WP_003429990.1 | YihY/virulence factor BrkB family protein | - |
| K2217_RS08620 (K2217_08625) | 1827213..1829069 | + | 1857 | WP_003429992.1 | ATP-binding protein | - |
| K2217_RS08625 (K2217_08630) | 1829777..1830994 | + | 1218 | WP_003429993.1 | homoserine dehydrogenase | - |
| K2217_RS08630 (K2217_08635) | 1831111..1831593 | + | 483 | WP_003429994.1 | exosporium morphogenetic protein CdeM | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|