MGE detailed information
MGE type: Prophage MGE length: 18055 bp
Accession: NZ_CP081009 Location: 4277374..4295428 Organism: Escherichia coli strain Stbl4 Replicon: chromosome
Accession: NZ_CP081009 Location: 4277374..4295428 Organism: Escherichia coli strain Stbl4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K3830_RS20530 (4272736) | 4272736..4275222 | - | 2487 | WP_000778061.1 | periplasmic nitrate reductase subunit alpha | - |
| K3830_RS20535 (4275219) | 4275219..4275482 | - | 264 | WP_000557378.1 | chaperone NapD | - |
| K3830_RS20540 (4275472) | 4275472..4275966 | - | 495 | WP_000686723.1 | ferredoxin-type protein NapF | - |
| K3830_RS20545 (4276075) | 4276075..4276239 | + | 165 | WP_001310984.1 | protein YojO | - |
| K3830_RS20550 (4276374) | 4276374..4276862 | + | 489 | WP_000849209.1 | serine protease inhibitor ecotin | - |
| K3830_RS20555 (4277647) | 4277647..4278414 | - | 768 | Protein_4046 | exonuclease | - |
| K3830_RS20560 (4278507) | 4278507..4278698 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| K3830_RS20565 (4278695) | 4278695..4278883 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| K3830_RS20570 (4279451) | 4279451..4279669 | - | 219 | WP_001171942.1 | protein YdfC | - |
| K3830_RS22345 (4279699) | 4279699..4279827 | - | 129 | WP_000344964.1 | protein YdfB | - |
| K3830_RS20575 (4279829) | 4279829..4279984 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| K3830_RS20580 (4280151) | 4280151..4280558 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| K3830_RS20585 (4280642) | 4280642..4280872 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| K3830_RS20590 (4280856) | 4280856..4281134 | + | 279 | Protein_4054 | hypothetical protein | - |
| K3830_RS20595 (4281169) | 4281169..4281318 | + | 150 | WP_011443592.1 | protein YdfW | - |
| K3830_RS20600 (4281755) | 4281755..4282087 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| K3830_RS20605 (4282290) | 4282290..4282595 | - | 306 | WP_001326990.1 | protein YdfV | - |
| K3830_RS20610 (4282620) | 4282620..4282859 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| K3830_RS20615 (4282859) | 4282859..4283146 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| K3830_RS20620 (4283218) | 4283218..4283373 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| K3830_RS20625 (4283590) | 4283590..4283841 | + | 252 | WP_000980994.1 | protein Rem | - |
| K3830_RS20630 (4283908) | 4283908..4284186 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| K3830_RS20635 (4284188) | 4284188..4285237 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| K3830_RS20640 (4285251) | 4285251..4286003 | + | 753 | WP_001047135.1 | antitermination protein | - |
| K3830_RS20645 (4286281) | 4286281..4286370 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| K3830_RS20650 (4286425) | 4286425..4286637 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| K3830_RS20655 (4286938) | 4286938..4287153 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| K3830_RS20660 (4287517) | 4287517..4287687 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| K3830_RS20665 (4287907) | 4287907..4288122 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| K3830_RS20670 (4288127) | 4288127..4288438 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| K3830_RS20675 (4288435) | 4288435..4288968 | + | 534 | WP_001092971.1 | lysozyme | - |
| K3830_RS20680 (4288965) | 4288965..4289462 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| K3830_RS20685 (4289825) | 4289825..4290037 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| K3830_RS20690 (4290048) | 4290048..4290236 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| K3830_RS20695 (4290239) | 4290239..4290304 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| K3830_RS20700 (4290383) | 4290383..4290538 | + | 156 | WP_001309517.1 | protein YnfN | - |
| K3830_RS20705 (4290710) | 4290710..4290883 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| K3830_RS20710 (4291035) | 4291035..4291445 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| K3830_RS20715 (4291503) | 4291503..4291736 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| K3830_RS20720 (4292268) | 4292268..4292402 | - | 135 | Protein_4080 | IS3 family transposase | - |
| K3830_RS20725 (4293077) | 4293077..4293265 | + | 189 | WP_000131420.1 | hypothetical protein | - |
| K3830_RS20730 (4293868) | 4293868..4294281 | + | 414 | WP_000483319.1 | hypothetical protein | - |
| K3830_RS20735 (4294456) | 4294456..4294851 | + | 396 | WP_000491615.1 | polymer-forming cytoskeletal protein | - |
| K3830_RS20740 (4295015) | 4295015..4295428 | + | 414 | WP_001351580.1 | hypothetical protein | - |
| K3830_RS20745 (4295538) | 4295538..4296599 | + | 1062 | WP_001092154.1 | EAL domain-containing protein | - |
| K3830_RS20750 (4297190) | 4297190..4300198 | - | 3009 | WP_001143750.1 | Tn3-like element ISEc63 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|