MGE detailed information
MGE type: Genomic_island MGE length: 17834 bp
Accession: NZ_CP081009 Location: 4179843..4197676 Organism: Escherichia coli strain Stbl4 Replicon: chromosome
Accession: NZ_CP081009 Location: 4179843..4197676 Organism: Escherichia coli strain Stbl4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K3830_RS19955 (4177034) | 4177034..4177612 | - | 579 | Protein_3933 | flagellar biosynthesis protein FlhA | - |
| K3830_RS19960 (4177584) | 4177584..4178369 | + | 786 | WP_000207552.1 | putative lateral flagellar export/assembly protein LafU | - |
| K3830_RS19965 (4178440) | 4178440..4179495 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| K3830_RS19970 (4179547) | 4179547..4179840 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | - |
| K3830_RS19975 (4179843) | 4179843..4180241 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | - |
| K3830_RS19980 (4180251) | 4180251..4180703 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| K3830_RS19985 (4181021) | 4181021..4181227 | + | 207 | Protein_3939 | RtcB family protein | - |
| K3830_RS19990 (4181223) | 4181223..4181744 | + | 522 | Protein_3940 | peptide chain release factor H | - |
| K3830_RS19995 (4181801) | 4181801..4183258 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| K3830_RS20000 (4183519) | 4183519..4183977 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (4184573) | 4184573..4184653 | + | 81 | NuclAT_11 | - | - |
| - (4184573) | 4184573..4184653 | + | 81 | NuclAT_11 | - | - |
| - (4184573) | 4184573..4184653 | + | 81 | NuclAT_11 | - | - |
| - (4184573) | 4184573..4184653 | + | 81 | NuclAT_11 | - | - |
| K3830_RS20005 (4184069) | 4184069..4185313 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| K3830_RS20010 (4185371) | 4185371..4185772 | + | 402 | WP_000174689.1 | sigma factor-binding protein Crl | - |
| K3830_RS20015 (4185811) | 4185811..4186866 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| K3830_RS20020 (4187154) | 4187154..4188257 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| K3830_RS20025 (4188269) | 4188269..4189522 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| K3830_RS20035 (4190094) | 4190094..4190435 | - | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| K3830_RS20040 (4190456) | 4190456..4190773 | - | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| K3830_RS20045 (4190792) | 4190792..4191013 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| K3830_RS20050 (4191022) | 4191022..4191498 | - | 477 | WP_000811693.1 | RadC family protein | - |
| K3830_RS20055 (4191514) | 4191514..4191972 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| K3830_RS20060 (4192070) | 4192070..4192309 | - | 240 | WP_000194654.1 | DUF905 family protein | - |
| K3830_RS20065 (4192386) | 4192386..4192853 | - | 468 | WP_001547765.1 | protein YkfB | - |
| K3830_RS20070 (4192876) | 4192876..4193319 | - | 444 | WP_000824223.1 | lipoprotein YafY | - |
| K3830_RS20075 (4193319) | 4193319..4193495 | - | 177 | WP_001285112.1 | hypothetical protein | - |
| K3830_RS20080 (4193542) | 4193542..4193733 | - | 192 | Protein_3957 | DeoR family transcriptional regulator | - |
| K3830_RS20085 (4193950) | 4193950..4194771 | - | 822 | WP_000197389.1 | DUF932 domain-containing protein | - |
| K3830_RS20090 (4194863) | 4194863..4195726 | - | 864 | WP_001065553.1 | GTPase family protein | - |
| K3830_RS20095 (4196055) | 4196055..4196948 | - | 894 | WP_000770246.1 | LysR substrate-binding domain-containing protein | - |
| K3830_RS20100 (4197044) | 4197044..4197301 | + | 258 | Protein_3961 | IS3 family transposase ISEc52 | Transposase |
| K3830_RS20105 (4197419) | 4197419..4197676 | + | 258 | Protein_3962 | multidrug efflux transporter transcriptional repressor AcrR | - |
| K3830_RS20110 (4197804) | 4197804..4201166 | + | 3363 | WP_000177732.1 | mechanosensitive channel MscK | - |
| K3830_RS20115 (4201378) | 4201378..4201539 | - | 162 | WP_000051153.1 | pleiotropic regulatory protein RsmS | - |
| K3830_RS20120 (4201553) | 4201553..4202080 | - | 528 | WP_000844874.1 | primosomal replication protein N'' | - |
| K3830_RS20125 (4202150) | 4202150..4202527 | + | 378 | WP_001188905.1 | DUF454 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|