MGE detailed information
MGE type: Genomic_island MGE length: 9517 bp
Accession: NZ_CP081009 Location: 3267136..3276652 Organism: Escherichia coli strain Stbl4 Replicon: chromosome
Accession: NZ_CP081009 Location: 3267136..3276652 Organism: Escherichia coli strain Stbl4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K3830_RS15455 (3262730) | 3262730..3264181 | - | 1452 | WP_000446023.1 | PTS fructose-like transporter subunit IIBC | - |
| K3830_RS15460 (3264192) | 3264192..3264638 | - | 447 | WP_000729595.1 | PTS fructose transporter subunit IIA | - |
| K3830_RS15465 (3264939) | 3264939..3265253 | - | 315 | WP_000619493.1 | L-rhamnose mutarotase | - |
| K3830_RS15470 (3265263) | 3265263..3266087 | - | 825 | WP_001179745.1 | rhamnulose-1-phosphate aldolase | - |
| K3830_RS15475 (3266261) | 3266261..3266734 | - | 474 | Protein_3043 | sulfatase-like hydrolase/transferase | - |
| K3830_RS15480 (3267136) | 3267136..3267897 | - | 762 | WP_000060495.1 | acid stress response transcriptional regulator YdeO | - |
| K3830_RS15485 (3267972) | 3267972..3268169 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| K3830_RS15490 (3268417) | 3268417..3270696 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| K3830_RS15495 (3271030) | 3271030..3271944 | - | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| K3830_RS15500 (3272003) | 3272003..3272506 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| K3830_RS15505 (3272519) | 3272519..3273049 | - | 531 | WP_000876763.1 | Protein FimF | VF |
| K3830_RS15510 (3273063) | 3273063..3274289 | - | 1227 | Protein_3050 | Outer membrane usher protein FimD | VF |
| K3830_RS15515 (3274544) | 3274544..3274752 | - | 209 | Protein_3051 | AraC family transcriptional regulator | - |
| K3830_RS15520 (3275064) | 3275064..3276386 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| K3830_RS15525 (3276386) | 3276386..3276652 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.005 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.005 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.005 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.005 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.007 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.005 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.005 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.005 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.005 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.005 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.005 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.005 |